DY260313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC35_ARATH (Ubiquitin carrier protein E2 35 OS=Arabidopsis thaliana GN=UBC35 PE=1 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 1.392e-77 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 1 Query: 49 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP Sbjct: 1 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 119 HSP 2 Score: 71.633 bits (174), Expect = 1.392e-77 Identity = 31/35 (88.57%), Postives = 34/35 (97.14%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYASGA 508 PDDPLSENI KHWK+NEA+AV+TAKEWTRLYASGA Sbjct: 119 PDDPLSENIAKHWKSNEAEAVDTAKEWTRLYASGA 153
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBC36_ARATH (Ubiquitin carrier protein E2 36 OS=Arabidopsis thaliana GN=UBC36 PE=1 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.816e-77 Identity = 118/119 (99.16%), Postives = 119/119 (100.00%), Query Frame = 1 Query: 49 MANSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 MANSNLPRRIIKETQRLLSEPAPGISASPSE+NMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP Sbjct: 1 MANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 119 HSP 2 Score: 72.7886 bits (177), Expect = 1.816e-77 Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYASGA 508 PDDPLSENI KHWK+NEA+AVETAKEWTRLYASGA Sbjct: 119 PDDPLSENIAKHWKSNEAEAVETAKEWTRLYASGA 153
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.782e-62 Identity = 98/116 (84.48%), Postives = 105/116 (90.52%), Query Frame = 1 Query: 58 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP SP+EGG FKLELFLPEEYPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP Sbjct: 2 AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 117 HSP 2 Score: 56.225 bits (134), Expect = 1.782e-62 Identity = 22/32 (68.75%), Postives = 28/32 (87.50%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYA 499 PDDPL+ ++ + WKTNEAQA+ETA+ WTRLYA Sbjct: 117 PDDPLANDVAEQWKTNEAQAIETARAWTRLYA 148
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.782e-62 Identity = 98/116 (84.48%), Postives = 105/116 (90.52%), Query Frame = 1 Query: 58 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP SP+EGG FKLELFLPEEYPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP Sbjct: 2 AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 117 HSP 2 Score: 56.225 bits (134), Expect = 1.782e-62 Identity = 22/32 (68.75%), Postives = 28/32 (87.50%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYA 499 PDDPL+ ++ + WKTNEAQA+ETA+ WTRLYA Sbjct: 117 PDDPLANDVAEQWKTNEAQAIETARAWTRLYA 148
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.782e-62 Identity = 98/116 (84.48%), Postives = 105/116 (90.52%), Query Frame = 1 Query: 58 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP SP+EGG FKLELFLPEEYPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP Sbjct: 2 AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 117 HSP 2 Score: 56.225 bits (134), Expect = 1.782e-62 Identity = 22/32 (68.75%), Postives = 28/32 (87.50%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYA 499 PDDPL+ ++ + WKTNEAQA+ETA+ WTRLYA Sbjct: 117 PDDPLANDVAEQWKTNEAQAIETARAWTRLYA 148
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBE2N_BOVIN (Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.782e-62 Identity = 98/116 (84.48%), Postives = 105/116 (90.52%), Query Frame = 1 Query: 58 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP SP+EGG FKLELFLPEEYPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP Sbjct: 2 AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 117 HSP 2 Score: 56.225 bits (134), Expect = 1.782e-62 Identity = 22/32 (68.75%), Postives = 28/32 (87.50%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYA 499 PDDPL+ ++ + WKTNEAQA+ETA+ WTRLYA Sbjct: 117 PDDPLANDVAEQWKTNEAQAIETARAWTRLYA 148
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 5.150e-62 Identity = 98/116 (84.48%), Postives = 105/116 (90.52%), Query Frame = 1 Query: 58 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP SP+EGG FKLELFLPEEYPMAAPKVRF+TKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP Sbjct: 2 AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 117 HSP 2 Score: 54.6842 bits (130), Expect = 5.150e-62 Identity = 21/32 (65.62%), Postives = 28/32 (87.50%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYA 499 PDDPL+ ++ + WK+NEAQA+ETA+ WTRLYA Sbjct: 117 PDDPLANDVAEQWKSNEAQAIETARAWTRLYA 148
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBE2N_MACFA (Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 8.757e-62 Identity = 97/116 (83.62%), Postives = 104/116 (89.66%), Query Frame = 1 Query: 58 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 + LPRRIIKETQRLL+EP PGI A P E N RYF+V+I GP SP+EGG FKLELFLPEEYPMAAPKVRF+TKIYHPN+DK GRICLDILKDKWSPALQIRTVLLSIQALLSAPNP Sbjct: 2 AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKSGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 117 HSP 2 Score: 56.225 bits (134), Expect = 8.757e-62 Identity = 22/32 (68.75%), Postives = 28/32 (87.50%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYA 499 PDDPL+ ++ + WKTNEAQA+ETA+ WTRLYA Sbjct: 117 PDDPLANDVAEQWKTNEAQAIETARAWTRLYA 148
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBE2N_DICDI (Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium discoideum GN=ube2n PE=3 SV=2) HSP 1 Score: 201.06 bits (510), Expect = 4.685e-60 Identity = 96/116 (82.76%), Postives = 106/116 (91.38%), Query Frame = 1 Query: 58 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 + LP+RIIKETQRL++EPAPGISA+P+ DN RYF V I GP SP+EGGVF LELFL ++YPM+APKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP Sbjct: 2 ATLPKRIIKETQRLMTEPAPGISATPATDNFRYFKVAISGPLDSPFEGGVFNLELFLTDDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 117 HSP 2 Score: 53.1434 bits (126), Expect = 4.685e-60 Identity = 20/32 (62.50%), Postives = 27/32 (84.38%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYA 499 PDDPL+ ++ +HWKTNE +A+ A+EWTRLYA Sbjct: 117 PDDPLANDVAEHWKTNEKEAMARAREWTRLYA 148
BLAST of DY260313 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.104e-59 Identity = 94/116 (81.03%), Postives = 108/116 (93.10%), Query Frame = 1 Query: 58 SNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNP 405 S+LPRRIIKETQRL+ EP PGI+A P E+N RYF+V++ GP SP+EGGVFKLELFLPE+YPM+APKVRF+TKIYHPNID+LGRICLD+LKDKWSPALQIRT+LLSIQALLSAPNP Sbjct: 2 SSLPRRIIKETQRLMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNP 117 HSP 2 Score: 46.595 bits (109), Expect = 5.104e-59 Identity = 17/32 (53.12%), Postives = 25/32 (78.12%), Query Frame = 2 Query: 404 PDDPLSENIRKHWKTNEAQAVETAKEWTRLYA 499 PDDPL+ ++ + WK NEA+A+ A+EWT+ YA Sbjct: 117 PDDPLANDVAELWKVNEAEAIRNAREWTQKYA 148 The following BLAST results are available for this feature:
BLAST of DY260313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 240
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260313 ID=DY260313; Name=DY260313; organism=Citrus clementina; type=EST; length=1301bpback to top |