DY260317

Overview
NameDY260317
Unique NameDY260317
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length684
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP80_SOLLC (Heat shock cognate protein 80 OS=Solanum lycopersicum GN=HSC80 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.083e-39
Identity = 76/86 (88.37%), Postives = 82/86 (95.35%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKT 259
            AYLVAEKV+VT KHNDDEQY+WESQAGGSFTVTRDTSGE LGRGTK+ L+LKED LEYLEERRLKDLIKKHSEF+SYPISLW+EKT
Sbjct:  128 AYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGENLGRGTKMVLYLKEDQLEYLEERRLKDLIKKHSEFISYPISLWVEKT 213          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP82_ARATH (Heat shock protein 81-2 OS=Arabidopsis thaliana GN=HSP81-2 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.333e-39
Identity = 75/86 (87.21%), Postives = 82/86 (95.35%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKT 259
            AYLVA+KV+VT KHNDDEQY+WESQAGGSFTVTRDTSGE LGRGTK+ L+LKED LEYLEERRLKDL+KKHSEF+SYPISLWIEKT
Sbjct:  128 AYLVADKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGETLGRGTKMVLYLKEDQLEYLEERRLKDLVKKHSEFISYPISLWIEKT 213          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSJ (Heat shock protein 81-1 OS=Oryza sativa subsp. japonica GN=HSP81-1 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 5.333e-39
Identity = 76/86 (88.37%), Postives = 82/86 (95.35%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKT 259
            AYLVAE+V+VT KHNDDEQY+WESQAGGSFTVTRDTSGE LGRGTKITL+LK+D LEYLEERRLKDLIKKHSEF+SYPISLW EKT
Sbjct:  129 AYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLIKKHSEFISYPISLWTEKT 214          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP81_ORYSI (Heat shock protein 81-1 OS=Oryza sativa subsp. indica GN=HSP81-1 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.333e-39
Identity = 76/86 (88.37%), Postives = 82/86 (95.35%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKT 259
            AYLVAE+V+VT KHNDDEQY+WESQAGGSFTVTRDTSGE LGRGTKITL+LK+D LEYLEERRLKDLIKKHSEF+SYPISLW EKT
Sbjct:  129 AYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLIKKHSEFISYPISLWTEKT 214          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP83_ORYSJ (Heat shock protein 81-3 OS=Oryza sativa subsp. japonica GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 6.965e-39
Identity = 75/86 (87.21%), Postives = 82/86 (95.35%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKT 259
            AYLVAE+V+VT KHNDDEQY+WESQAGGSFTVTRDTSGE LGRGTKITL+LK+D LEYLEERRLKDL+KKHSEF+SYPISLW EKT
Sbjct:  129 AYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLWTEKT 214          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP82_ORYSJ (Heat shock protein 81-2 OS=Oryza sativa subsp. japonica GN=HSP81-2 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 6.965e-39
Identity = 75/86 (87.21%), Postives = 82/86 (95.35%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKT 259
            AYLVAE+V+VT KHNDDEQY+WESQAGGSFTVTRDTSGE LGRGTKITL+LK+D LEYLEERRLKDL+KKHSEF+SYPISLW EKT
Sbjct:  129 AYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLVKKHSEFISYPISLWTEKT 214          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP83_ARATH (Heat shock protein 81-3 OS=Arabidopsis thaliana GN=HSP81-3 PE=2 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.552e-38
Identity = 73/86 (84.88%), Postives = 82/86 (95.35%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKT 259
            AYLVA+KV+VT KHNDDEQY+WESQAGGSFTVTRDTSGE LGRGTK+ L+LKED +EY+EERRLKDL+KKHSEF+SYPISLWIEKT
Sbjct:  128 AYLVADKVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEALGRGTKMVLYLKEDQMEYIEERRLKDLVKKHSEFISYPISLWIEKT 213          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP83_IPONI (Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.715e-37
Identity = 75/86 (87.21%), Postives = 78/86 (90.70%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKT 259
            AYLVAEKVIVT KHNDDEQYIWESQAGGSFTVTRD  GE LGRGTKITL LKED LEYLEERR+KDL+KKHSEF+SYPI LW EKT
Sbjct:  133 AYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVTRDVDGEQLGRGTKITLFLKEDQLEYLEERRIKDLVKKHSEFISYPIYLWTEKT 218          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP81_ARATH (Heat shock protein 81-1 OS=Arabidopsis thaliana GN=HSP81-1 PE=1 SV=3)

HSP 1 Score: 154.451 bits (389), Expect = 4.991e-37
Identity = 73/86 (84.88%), Postives = 78/86 (90.70%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKT 259
            AYLVAEKV+VT KHNDDEQY+WESQAGGSFTVTRD  GE LGRGTKITL LK+D LEYLEERRLKDL+KKHSEF+SYPI LW EKT
Sbjct:  128 AYLVAEKVVVTTKHNDDEQYVWESQAGGSFTVTRDVDGEPLGRGTKITLFLKDDQLEYLEERRLKDLVKKHSEFISYPIYLWTEKT 213          
BLAST of DY260317 vs. ExPASy Swiss-Prot
Match: HSP82_MAIZE (Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.477e-36
Identity = 71/86 (82.56%), Postives = 79/86 (91.86%), Query Frame = 2
Query:    2 AYLVAEKVIVTAKHNDDEQYIWESQAGGSFTVTRDTSGELLGRGTKITLHLKEDPLEYLEERRLKDLIKKHSEFLSYPISLWIEKT 259
            AYLVA++V+VT KHNDDEQY+WESQAGGSFTVT DT+GE LGRGTKITL LK+D LEYLEERRLKDL+KKHSEF+SYPI LW EKT
Sbjct:  139 AYLVADRVMVTTKHNDDEQYVWESQAGGSFTVTHDTTGEQLGRGTKITLFLKDDQLEYLEERRLKDLVKKHSEFISYPIYLWTEKT 224          
The following BLAST results are available for this feature:
BLAST of DY260317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
HSP80_SOLLC4.083e-3988.37Heat shock cognate protein 80 OS=Solanum lycopersi... [more]
HSP82_ARATH5.333e-3987.21Heat shock protein 81-2 OS=Arabidopsis thaliana GN... [more]
HSP81_ORYSJ5.333e-3988.37Heat shock protein 81-1 OS=Oryza sativa subsp. jap... [more]
HSP81_ORYSI5.333e-3988.37Heat shock protein 81-1 OS=Oryza sativa subsp. ind... [more]
HSP83_ORYSJ6.965e-3987.21Heat shock protein 81-3 OS=Oryza sativa subsp. jap... [more]
HSP82_ORYSJ6.965e-3987.21Heat shock protein 81-2 OS=Oryza sativa subsp. jap... [more]
HSP83_ARATH1.552e-3884.88Heat shock protein 81-3 OS=Arabidopsis thaliana GN... [more]
HSP83_IPONI1.715e-3787.21Heat shock protein 83 OS=Ipomoea nil GN=HSP83A PE=... [more]
HSP81_ARATH4.991e-3784.88Heat shock protein 81-1 OS=Arabidopsis thaliana GN... [more]
HSP82_MAIZE2.477e-3682.56Heat shock protein 82 OS=Zea mays GN=HSP82 PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YC02FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260317 ID=DY260317; Name=DY260317; organism=Citrus clementina; type=EST; length=684bp
AGCTTACTTGGTTGCTGAGAAGGTTATTGTTACCGCCAAGCACAACGATG
ATGAGCAGTACATCTGGGAGTCTCAGGCCGGTGGATCATTCACTGTTACC
AGGGACACTTCTGGTGAGCTTCTTGGCCGCGGTACAAAGATCACTCTCCA
CCTCAAGGAAGACCCACTTGAGTACCTTGAGGAGCGCCGTTTGAAGGATT
TGATTAAGAAGCACTCTGAGTTCCTTAGTTACCCCATTTCCCTCTGGATT
GAGAAGACCCCTGAGAAGGAGATTTCTGATGATGAAGACCAGGAAGAAAA
GAAGGATGAGGAGGGTAAAGTTGAAGAAGTTGATGAAAAAAAAGAGAAGG
AAGAAAAGAAAAACAAAAACAACCGGGAGGTGTCCCCTGAGTGGGCCCTT
GGTGAACCACCCCAACCCCCTTTGGGAAGAGAAACCCGAAGAAAATTCCC
AAAAAAAAACTAGGCCCCCCTTCCCCCCAATTCCCGACCCATGACCGGGG
AGGAACCCCCCGGCCCGGTAACCCCCCTCCCCCGTTGAAGCGCCCCCCCT
GGGTTTTAACGGCCCCCCCCCCCTTTCCCCCCCACACAGGCCCCCCTTTT
TGCCCCCCCTGAACCCCCCGGGAAAAAAGCCCCCAACAAATAAACCAGGC
CTCCCCCTCCCCCCCCCGGGTCCCTCCCCCCGGG
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