DY260325

Overview
NameDY260325
Unique NameDY260325
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1298
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY260325 vs. ExPASy Swiss-Prot
Match: VSR1_ARATH (Vacuolar-sorting receptor 1 OS=Arabidopsis thaliana GN=VSR1 PE=1 SV=2)

HSP 1 Score: 234.958 bits (598), Expect = 7.720e-61
Identity = 115/189 (60.85%), Postives = 143/189 (75.66%), Query Frame = 2
Query:   89 KLGFLVGILFLLCGLSFGRFVVEKNSLKVTSPEKIKGVYECAIGNFGVPQYGGTLIGTVVYPKANQKACKGFDEVDLSFKSRPGGLPTFLLVDRGDCYFPLKAWNAQKGGAAAILVADDKTEPLITLDPPEEENAHAEYLPHIPIPSPPTSKSLGDRIHNSPRAGEPAQPESKTGTEAPPPPCERGPFQ 655
            KLG       L+  L+ GRFVVEKN+LKVTSP+ IKG+YECAIGNFGVPQYGGTL+GTVVYPK+NQKACK + + D+SFKS+PG LPTF+L+DRGDCYF LKAW AQ+ GAAAILVAD K EPLIT+D PEE+ + A+YL +I IPS   +K+LGD I ++   G+    +    TE+ P P ER  ++
Sbjct:    2 KLGLFTLSFLLILNLAMGRFVVEKNNLKVTSPDSIKGIYECAIGNFGVPQYGGTLVGTVVYPKSNQKACKSYSDFDISFKSKPGRLPTFVLIDRGDCYFTLKAWIAQQAGAAAILVADSKAEPLITMDTPEEDKSDADYLQNITIPSALITKTLGDSIKSALSGGDMVNMK-LDWTESVPHPDERVEYE 189          
BLAST of DY260325 vs. ExPASy Swiss-Prot
Match: VSR2_ARATH (Vacuolar-sorting receptor 2 OS=Arabidopsis thaliana GN=VSR2 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 4.383e-56
Identity = 113/194 (58.25%), Postives = 142/194 (73.20%), Query Frame = 2
Query:   80 MREKLGFLVGILFLLCGLSF--GRFVVEKNSLKVTSPEKIKGVYECAIGNFGVPQYGGTLIGTVVYPKANQKACKGFDEVDLSFKSRPGGLPTFLLVDRGDCYFPLKAWNAQKGGAAAILVADDKTEPLITLDPPEEENAHAEYLPHIPIPSPPTSKSLGDRIHNSPRAGEPAQPESKTGTEAPPPPCERGPFQ 655
            MR    +LV I+++  G S   GRFVVEKN+L+VTSPE I+GVYECA+GNFGVPQYGG++ G VVYPK NQKACK FD+ ++SF+SR  GLPTF+LVDRGDCYF LKAWNAQ+ GAA ILVAD++ E LIT+D PE+E + A+YL +I IPS   S+SLG  I  +   G+P    S    EA P P +R  ++
Sbjct:    1 MRTTNVWLVVIVWVTVGWSSCTGRFVVEKNNLRVTSPESIRGVYECALGNFGVPQYGGSMSGAVVYPKTNQKACKNFDDFEISFRSRVAGLPTFVLVDRGDCYFTLKAWNAQRAGAATILVADNRPEQLITMDAPEDETSDADYLQNITIPSALVSRSLGSAIKTAIAHGDPVH-ISLDWREALPHPNDRVAYE 193          
BLAST of DY260325 vs. ExPASy Swiss-Prot
Match: VSR3_ARATH (Vacuolar-sorting receptor 3 OS=Arabidopsis thaliana GN=VSR3 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 1.117e-51
Identity = 101/188 (53.72%), Postives = 135/188 (71.81%), Query Frame = 2
Query:   92 LGFLVGILFLLCGLSFGRFVVEKNSLKVTSPEKIKGVYECAIGNFGVPQYGGTLIGTVVYPKANQKACKGFDEVDLSFKSRPGGLPTFLLVDRGDCYFPLKAWNAQKGGAAAILVADDKTEPLITLDPPEEENAHAEYLPHIPIPSPPTSKSLGDRIHNSPRAGEPAQPESKTGTEAPPPPCERGPFQ 655
            L +L+ +  L+  L+  RFVVEKNSL VTSPE IKG ++ AIGNFG+PQYGG++ GTVVYPK NQK+CK F +  +SFKS+PG LPTFLLVDRGDC+F LK WNAQK GA+A+LVAD+  EPLIT+D PEE+ + A+Y+ +I IPS   +K  G+++  +   G+     +    EA P P +R  ++
Sbjct:    8 LPWLLLLTLLVSPLNDARFVVEKNSLSVTSPESIKGTHDSAIGNFGIPQYGGSMAGTVVYPKENQKSCKEFSDFSISFKSQPGALPTFLLVDRGDCFFALKVWNAQKAGASAVLVADNVDEPLITMDTPEEDVSSAKYIENITIPSALVTKGFGEKLKKAISGGDMVN-LNLDWREAVPHPDDRVEYE 194          
BLAST of DY260325 vs. ExPASy Swiss-Prot
Match: VSR4_ARATH (Vacuolar-sorting receptor 4 OS=Arabidopsis thaliana GN=VSR4 PE=2 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 5.545e-51
Identity = 103/195 (52.82%), Postives = 137/195 (70.26%), Query Frame = 2
Query:   80 MREKLGFLVGILFLLCGLS---FGRFVVEKNSLKVTSPEKIKGVYECAIGNFGVPQYGGTLIGTVVYPKANQKACKGFDEVDLSFKSRPGGLPTFLLVDRGDCYFPLKAWNAQKGGAAAILVADDKTEPLITLDPPEEENAHAEYLPHIPIPSPPTSKSLGDRIHNSPRAGEPAQPESKTGTEAPPPPCERGPFQ 655
            M++ L +L  +L L   +S     RFVVEKNSL VTSPE IKG ++ AIGNFG+PQYGG++ GTVVYPK NQK+CK F +  +SFKS+PG LPTFLLVDRGDC+F LK WNAQK GA+A+LVAD+  EPLIT+D PEE+ + A+Y+ +I IPS   +K  G+++  +   G+     +    EA P P +R  ++
Sbjct:    1 MKQLLCYLPWLLLLSLVVSPFNEARFVVEKNSLSVTSPESIKGTHDSAIGNFGIPQYGGSMAGTVVYPKENQKSCKEFSDFSISFKSQPGALPTFLLVDRGDCFFALKVWNAQKAGASAVLVADNVDEPLITMDTPEEDVSSAKYIENITIPSALVTKGFGEKLKKAISGGDMVN-LNLDWREAVPHPDDRVEYE 194          
BLAST of DY260325 vs. ExPASy Swiss-Prot
Match: VSR1_PEA (Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP80 PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 2.752e-50
Identity = 102/189 (53.97%), Postives = 132/189 (69.84%), Query Frame = 2
Query:   89 KLGFLVGILFLLCGLSFGRFVVEKNSLKVTSPEKIKGVYECAIGNFGVPQYGGTLIGTVVYPKANQKACKGFDEVDLSFKSRPGGLPTFLLVDRGDCYFPLKAWNAQKGGAAAILVADDKTEPLITLDPPEEENAHAEYLPHIPIPSPPTSKSLGDRIHNSPRAGEPAQPESKTGTEAPPPPCERGPFQ 655
            +L  ++ + F+L  LS  RFVVEKNSL VTSPEKIKG ++ AIGNFG+PQYGG++ G VVYPK N K CK FD    SFKSRPG LPT LL+DRG C+F LK WNAQK GA+A+LVADD  EPLIT+D PEE+ + A+Y+ +I IPS    KS G+++ ++   G+     +    EA P P +R  ++
Sbjct:    5 RLSAILFLGFMLTSLSTARFVVEKNSLSVTSPEKIKGKHDSAIGNFGIPQYGGSMAGNVVYPKDNSKGCKDFDS---SFKSRPGALPTILLLDRGSCFFALKVWNAQKAGASAVLVADDIEEPLITMDTPEEDVSSAKYIENITIPSALIGKSFGEKLKDAISGGDMVN-VNLDWREAVPHPDDRVEYE 189          
BLAST of DY260325 vs. ExPASy Swiss-Prot
Match: VSR7_ARATH (Vacuolar-sorting receptor 7 OS=Arabidopsis thaliana GN=VSR7 PE=2 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 1.981e-32
Identity = 74/168 (44.05%), Postives = 105/168 (62.50%), Query Frame = 2
Query:   83 REKLGFLVGILFLLCGLSFGRFVVEKNSLKVTSPEKIKGVYECAIGNFGVPQYGGTLIGTVVYPKANQKACKGFDEVDLSFKSRPGGLPTFLLVDRGDCYFPLKAWNAQKGGAAAILVADDKTEPLITLDPPEEENAHAEYLPHIPIPSPPTSKSLGDRIHNSPRAGE 586
            R  L FL+  L ++  +   RFVVEK S+ V +PE+++  ++ +I NFG+P YGG LIG+VVYP +    C  F +   +FK +    PT LL+DRG CYF LKAW+AQ+ GAAA+LVAD+  EPL+T+D PEE      ++  + IPS    KS GD +    + G+
Sbjct:    7 RASLTFLLAALTIIAMVVEARFVVEKESISVLNPEEMRSKHDGSIANFGLPDYGGFLIGSVVYPDSKTDGCSAFGK---TFKPK-FPRPTILLLDRGGCYFALKAWHAQQAGAAAVLVADNVDEPLLTMDSPEESKDADGFIEKLTIPSVLIDKSFGDDLRQGFQKGK 170          
BLAST of DY260325 vs. ExPASy Swiss-Prot
Match: VSR6_ARATH (Vacuolar-sorting receptor 6 OS=Arabidopsis thaliana GN=VSR6 PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 7.047e-30
Identity = 70/173 (40.46%), Postives = 104/173 (60.12%), Query Frame = 2
Query:  137 FGRFVVEKNSLKVTSPEKIKGVYECAIGNFGVPQYGGTLIGTVVYPKANQKACKGFDEVDLSFKSRPGGLPTFLLVDRGDCYFPLKAWNAQKGGAAAILVADDKTEPLITLDPPEEENAHAEYLPHIPIPSPPTSKSLGDRIHNSPRAGEPAQPESKTGTEAPPPPCERGPFQ 655
            FGRF+VEK+S+ + +P  ++  ++ AI NFGVP YGG +IG+VVY       C  FD+   +FK +    PT L++DRG+CYF LK WN Q+ G AA+LVAD+  EPLIT+D PEE     +++  + IPS     S  + +  + + GE    +    +E+ P P ER  ++
Sbjct:   24 FGRFIVEKSSVTILNPLAMRSKHDAAIANFGVPNYGGYMIGSVVYAGQGAYGCDSFDK---TFKPK-FPRPTILIIDRGECYFALKVWNGQQSGVAAVLVADNVDEPLITMDSPEESKEADDFIEKLNIPSALIDFSFANTLKQALKKGEEVVLKI-DWSESLPHPDERVEYE 191          
BLAST of DY260325 vs. ExPASy Swiss-Prot
Match: VSR5_ARATH (Vacuolar-sorting receptor 5 OS=Arabidopsis thaliana GN=VSR5 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.053e-25
Identity = 67/188 (35.64%), Postives = 110/188 (58.51%), Query Frame = 2
Query:   92 LGFLVGILFLLCGLSFGRFVVEKNSLKVTSPEKIKGVYECAIGNFGVPQYGGTLIGTVVYPKANQKACKGFDEVDLSFKSRPGGLPTFLLVDRGDCYFPLKAWNAQKGGAAAILVADDKTEPLITLDPPEEENAHAEYLPHIPIPSPPTSKSLGDRIHNSPRAGEPAQPESKTGTEAPPPPCERGPFQ 655
            L  ++ +  ++      RF VEK+SL V +  ++   ++ AI NFG+P+YGG +IG+VVY   +   C  F++   +F ++    P  LL+DRG C F LK WN Q+ GAAA+L+AD+  EPLIT+D P++E+   +++  + IPS    +S GD +  + + GE    +    +E+ P P ER  ++
Sbjct:   10 LALILALTMVVVNGFSSRFFVEKSSLTVLNSWEMGAKHDAAIANFGLPKYGGFMIGSVVYAGQDAYGCNSFNK---TFNTK-SPYPKILLIDRGVCNFALKIWNGQQSGAAAVLLADNIVEPLITMDTPQDED--PDFIDKVKIPSALILRSFGDSLKKALKRGEEVILK-MDWSESIPNPDERVEYE 190          
The following BLAST results are available for this feature:
BLAST of DY260325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
VSR1_ARATH7.720e-6160.85Vacuolar-sorting receptor 1 OS=Arabidopsis thalian... [more]
VSR2_ARATH4.383e-5658.25Vacuolar-sorting receptor 2 OS=Arabidopsis thalian... [more]
VSR3_ARATH1.117e-5153.72Vacuolar-sorting receptor 3 OS=Arabidopsis thalian... [more]
VSR4_ARATH5.545e-5152.82Vacuolar-sorting receptor 4 OS=Arabidopsis thalian... [more]
VSR1_PEA2.752e-5053.97Vacuolar-sorting receptor 1 OS=Pisum sativum GN=BP... [more]
VSR7_ARATH1.981e-3244.05Vacuolar-sorting receptor 7 OS=Arabidopsis thalian... [more]
VSR6_ARATH7.047e-3040.46Vacuolar-sorting receptor 6 OS=Arabidopsis thalian... [more]
VSR5_ARATH1.053e-2535.64Vacuolar-sorting receptor 5 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP12YC13FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260325 ID=DY260325; Name=DY260325; organism=Citrus clementina; type=EST; length=1298bp
AATAAATAAGGTTTGGTGATCTGGGTAGTTCTCTTTCGATCAGTTCGTTG
AGGAGAAAGATTGAAAATCAGCTGCAAAGATGAGGGAAAAGCTAGGGTTT
TTGGTGGGTATTTTGTTTTTACTATGTGGTTTAAGTTTTGGAAGATTTGT
TGTGGAGAAAAATAGCTTGAAAGTGACATCCCCAGAGAAAATCAAAGGAG
TTTATGAATGTGCAATTGGGAATTTTGGGGTTCCTCAATATGGAGGAACT
TTAATTGGTACCGTGGTTTATCCAAAAGCCAATCAAAAGGCTTGTAAGGG
TTTTGATGAAGTTGATCTTTCCTTCAAGTCAAGGCCTGGAGGATTACCCA
CTTTTCTCCTTGTTGATCGAGGAGATTGTTACTTCCCCTTGAAGGCCTGG
AATGCGCAAAAAGGTGGAGCTGCTGCTATTCTTGTGGCAGATGATAAGAC
TGAACCTTTGATTACCCTGGACCCCCCTGAAGAAGAGAATGCCCACGCTG
AATATCTACCACACATCCCCATTCCCTCACCCCCTACAAGCAAATCTTTG
GGTGACCGAATCCACAACTCCCCACGTGCCGGGGAACCTGCTCAGCCGGA
ATCCAAGACTGGGACAGAGGCCCCTCCCCCCCCCTGCGAACGCGGGCCTT
TTCAATTCGGGACACCCATCCCCCCCCATCCGCGGCCCGCCCCCACCCCA
CCCACATCCACCTCTCTCCGCACTTCCACGGGACGCGCCCCGACCACTCC
GCGCCGACGGGCAACCGCCCCGCATCACCCCCCCCCCCACGCCACCCGGT
ACTTCCCCCGGATGCCCCATCACCCTGACCTAAACCACAAGCATTCCCCA
CCCCCCCTGCTCCCTGCTTCATTCTCCGCTTCCTCTGACCACCCACCATC
CAACGAATGATACACCGGTATCAGTTTCCCGACATATCTACACCCCCCCC
CCCCACTTCTGCCCACACACGCCCCCCCTCTCCCCTCACGCTGACCCTCG
ACGATACTACCCCCGCTCTCTCCGGCCTCGCTCTATTCTCGCGGCGCCCC
CGAGCCATCCTACGACACGCCTCTCCAATCTCTAATACTAATTAACGCAG
CACTCCCTCTCGTCCATACCAAACAGAGACCACCCCCTTAACCAACACTC
TCACATGCTGCATAATCTCGCTCGCCTGCCTTCCAACCTCACACTCTCCC
CTGCCCGCTCCCCCCCTTGCACCACCAATTCCTCACTCACTACCCCCACC
CCTCCCACCCACGCCTCCTCCACCCCTCCCCTCACCCAGCTTCTACCC
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