DY260326

Overview
NameDY260326
Unique NameDY260326
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1151
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1484 contig Ccv1_Contig1484:1..1151. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DY260326 vs. ExPASy Swiss-Prot
Match: UBC9_XENTR (SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis GN=ube2i PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.528e-12
Identity = 32/48 (66.67%), Postives = 37/48 (77.08%), Query Frame = 1 
Query:   88 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAG 231
            GIA  RLA+ERK+WRK+HP GFVA P   PDG++NLM W C IPGK G
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKG 50
[Close]
BLAST of DY260326 vs. ExPASy Swiss-Prot
Match: UBC9_XENLA (SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=ube2i PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.528e-12
Identity = 32/48 (66.67%), Postives = 37/48 (77.08%), Query Frame = 1 
Query:   88 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAG 231
            GIA  RLA+ERK+WRK+HP GFVA P   PDG++NLM W C IPGK G
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKG 50
[Close]
BLAST of DY260326 vs. ExPASy Swiss-Prot
Match: UBC9_SPETR (SUMO-conjugating enzyme UBC9 OS=Spermophilus tridecemlineatus GN=UBE2I PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.528e-12
Identity = 32/48 (66.67%), Postives = 37/48 (77.08%), Query Frame = 1 
Query:   88 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAG 231
            GIA  RLA+ERK+WRK+HP GFVA P   PDG++NLM W C IPGK G
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKG 50
[Close]
BLAST of DY260326 vs. ExPASy Swiss-Prot
Match: UBC9_RAT (SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus GN=Ube2i PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.528e-12
Identity = 32/48 (66.67%), Postives = 37/48 (77.08%), Query Frame = 1 
Query:   88 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAG 231
            GIA  RLA+ERK+WRK+HP GFVA P   PDG++NLM W C IPGK G
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKG 50
[Close]
BLAST of DY260326 vs. ExPASy Swiss-Prot
Match: UBC9_MOUSE (SUMO-conjugating enzyme UBC9 OS=Mus musculus GN=Ube2i PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.528e-12
Identity = 32/48 (66.67%), Postives = 37/48 (77.08%), Query Frame = 1 
Query:   88 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAG 231
            GIA  RLA+ERK+WRK+HP GFVA P   PDG++NLM W C IPGK G
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKG 50
[Close]
BLAST of DY260326 vs. ExPASy Swiss-Prot
Match: UBC9_MESAU (SUMO-conjugating enzyme UBC9 OS=Mesocricetus auratus GN=UBE2I PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.528e-12
Identity = 32/48 (66.67%), Postives = 37/48 (77.08%), Query Frame = 1 
Query:   88 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAG 231
            GIA  RLA+ERK+WRK+HP GFVA P   PDG++NLM W C IPGK G
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKG 50
[Close]
BLAST of DY260326 vs. ExPASy Swiss-Prot
Match: UBC9_HUMAN (SUMO-conjugating enzyme UBC9 OS=Homo sapiens GN=UBE2I PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.528e-12
Identity = 32/48 (66.67%), Postives = 37/48 (77.08%), Query Frame = 1 
Query:   88 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAG 231
            GIA  RLA+ERK+WRK+HP GFVA P   PDG++NLM W C IPGK G
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKG 50
[Close]
BLAST of DY260326 vs. ExPASy Swiss-Prot
Match: UBC9_CHICK (SUMO-conjugating enzyme UBC9 OS=Gallus gallus GN=UBE2I PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.528e-12
Identity = 32/48 (66.67%), Postives = 37/48 (77.08%), Query Frame = 1 
Query:   88 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAG 231
            GIA  RLA+ERK+WRK+HP GFVA P   PDG++NLM W C IPGK G
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKG 50
[Close]
BLAST of DY260326 vs. ExPASy Swiss-Prot
Match: UBC9B_DANRE (SUMO-conjugating enzyme UBC9-B OS=Danio rerio GN=ube2ib PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.528e-12
Identity = 32/48 (66.67%), Postives = 37/48 (77.08%), Query Frame = 1 
Query:   88 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAG 231
            GIA  RLA+ERK+WRK+HP GFVA P   PDG++NLM W C IPGK G
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKG 50
[Close]
BLAST of DY260326 vs. ExPASy Swiss-Prot
Match: UBC9A_DANRE (SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=ube2ia PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 3.301e-12
Identity = 32/48 (66.67%), Postives = 37/48 (77.08%), Query Frame = 1 
Query:   88 GIARGRLAEERKSWRKNHPHGFVAKPETLPDGSVNLMVWHCTIPGKAG 231
            GIA  RLA+ERK+WRK+HP GFVA P   PDG++NLM W C IPGK G
Sbjct:    3 GIALSRLAQERKAWRKDHPFGFVAVPMKNPDGTMNLMNWECAIPGKKG 50
The following BLAST results are available for this feature:
BLAST of DY260326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
UBC9_XENTR2.528e-1266.67SUMO-conjugating enzyme UBC9 OS=Xenopus tropicalis... [more]
UBC9_XENLA2.528e-1266.67SUMO-conjugating enzyme UBC9 OS=Xenopus laevis GN=... [more]
UBC9_SPETR2.528e-1266.67SUMO-conjugating enzyme UBC9 OS=Spermophilus tride... [more]
UBC9_RAT2.528e-1266.67SUMO-conjugating enzyme UBC9 OS=Rattus norvegicus ... [more]
UBC9_MOUSE2.528e-1266.67SUMO-conjugating enzyme UBC9 OS=Mus musculus GN=Ub... [more]
UBC9_MESAU2.528e-1266.67SUMO-conjugating enzyme UBC9 OS=Mesocricetus aurat... [more]
UBC9_HUMAN2.528e-1266.67SUMO-conjugating enzyme UBC9 OS=Homo sapiens GN=UB... [more]
UBC9_CHICK2.528e-1266.67SUMO-conjugating enzyme UBC9 OS=Gallus gallus GN=U... [more]
UBC9B_DANRE2.528e-1266.67SUMO-conjugating enzyme UBC9-B OS=Danio rerio GN=u... [more]
UBC9A_DANRE3.301e-1266.67SUMO-conjugating enzyme UBC9-A OS=Danio rerio GN=u... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YC14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260326 ID=DY260326; Name=DY260326; organism=Citrus clementina; type=EST; length=1151bp
AAAAAAAAAAAAGGATAATAATAATTCCTTTTCATTATTTAGTGTTTTTG
AGAGCGAGTAAAAGAAAAGGAAAGAGCGATGTCGGGAGGCATAGCACGTG
GTCGGCTGGCTGAGGAGCGAAAGTCGTGGCGTAAAAATCATCCTCATGGT
TTCGTGGCAAAGCCTGAGACGTTGCCGGACGGTTCGGTGAATCTGATGGT
GTGGCATTGCACTATTCCCGGAAAAGCCGGAGTAAGTAACGGACTGGAAA
GGAAACCCTGCTGTTTCAATTATTATTGTTATTATTAACTTCCTTTTTAT
TTACTGTTTTATTTGAATGCTTGGTCAATTCAAGTTATGAAATCTTTGGC
TGGTGGAGTTTTTATGTTAAATATGAATTGATTCATTTTTACCGTAAACG
CTAGCTATTTTATGTGCTTAAGGTTTCAATGGAAGAATGGTTAGTTTCTG
ATTTATAGTTTCGTGTATTTCATTAGTAGACGAACAGTTAAAATCTCAGT
GTAGGTGTAATGGGATTTGAACCATTAACTGTTTGGATCATCAGGCTATT
TTGGTTGTATAGGATTCCATTTATGCCTCCTTTTCCTCGGGGGTTCTACA
TTTCGGTCATTTTGAAGTCAATGCCGGGAGATCTCCATCTAGCACTTTGC
TGGGATGTCGTTGGGCCTCGGAAGTCCATATTTGGTAACTACCCCCCCCC
CCTCCCCCCTCCACGCCGTTCACTCCCACTTGCCCACACCCCCAGTCGCG
CCCTAGCCCACCCCCCAACTCCCCAGTACTTTCGCCCCAAACCCCTCCGG
CCACCCCGCACCCCCCCCCCCACGCCCCCACCCCCCCCAACCCCCCCCCA
ACCGCCCACAATAGCCCCGCGACCCCAGCCAACGTTCCCCCCCCGCCGGA
CCCCACCACGTCATCGGCCTCCTCCCGAACTCCCGCGCCCTCACACCCCG
CCGCGCTCCGCCCCCTTCCCACCGCCGCGGGCCCATCCTCTTCCATCCAC
ACACGGCTCGACCCTGCCCCCTTGCGGCCCTCGCCCGTCACGATCCCCAA
CCGCCTACCCCCCCCCACCCCCTCTACCTGCAGCTACTCCCCACACTCCC
TAACCGTACCCACCTCCCCACCTCCGTCACCATACCACTCCTGCCCCCCA
C
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