DY260336
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260336 vs. ExPASy Swiss-Prot
Match: NFYC1_ARATH (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana GN=NFYC1 PE=1 SV=1) HSP 1 Score: 313.153 bits (801), Expect = 1.666e-84 Identity = 156/180 (86.67%), Postives = 162/180 (90.00%), Query Frame = 2 Query: 77 FHHLIXXXXXXXXMFWSYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAGLGG--MVGATASGVPYYYPPMGQPTGTAGPGGMMIGRPAVDPTGVYVQPPSQAWQSVWQT 610 +HHL+ +FW+YQRQEIEQ NDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAA LGG +V TASGVPYYYPPMGQP AGPGGMMIGRPA+DP GVYVQPPSQAWQSVWQT Sbjct: 33 YHHLLQQQQQQLQLFWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAVLGGGMVVAPTASGVPYYYPPMGQP---AGPGGMMIGRPAMDPNGVYVQPPSQAWQSVWQT 209
BLAST of DY260336 vs. ExPASy Swiss-Prot
Match: NFYC4_ARATH (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana GN=NFYC4 PE=2 SV=1) HSP 1 Score: 302.753 bits (774), Expect = 2.251e-81 Identity = 152/185 (82.16%), Postives = 159/185 (85.95%), Query Frame = 2 Query: 77 FHHLIXXXXXXXXMFWSYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE-----AAGLGGMVGATASGVPYYYPPMGQPTGTAGPGGMMIGRPAVDPTGVYVQPPSQAWQSVWQTPA 616 +HHL+ MFW+YQRQEIEQ NDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+EIK+E A G GGMV ASGVPYYYPPMGQP A PGGMMIGRPA+DP+GVY QPPSQAWQSVWQ A Sbjct: 46 YHHLLQQQQQQLQMFWTYQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAASGVPYYYPPMGQP---AVPGGMMIGRPAMDPSGVYAQPPSQAWQSVWQNSA 227
BLAST of DY260336 vs. ExPASy Swiss-Prot
Match: NFYC3_ARATH (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana GN=NFYC3 PE=1 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 4.424e-53 Identity = 106/165 (64.24%), Postives = 123/165 (74.55%), Query Frame = 2 Query: 119 FWSYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAGLGGMVGATASGVPYYYPPMGQPTGTAGPGGMMIGRPAVDPTGVYVQPPSQAWQSVWQTP 613 FW Q +EIE+ DFKNH LPLARIKKIMKADEDVRMISAEAP++FA+ACE+FILELT+RSW H EENKRRTLQKNDIAAA+TRTDIFDFLVDIVPR++++DE G G ATA+G PY Y P G T G GM++G P P Y+ P +WQ P Sbjct: 52 FWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGGVGAEAATAAGYPYGYLPPG--TAPIGNPGMVMGNPGAYPPNPYMGQP------MWQQP 208
BLAST of DY260336 vs. ExPASy Swiss-Prot
Match: NFYC9_ARATH (Nuclear transcription factor Y subunit C-9 OS=Arabidopsis thaliana GN=NFYC9 PE=2 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 3.506e-50 Identity = 106/169 (62.72%), Postives = 123/169 (72.78%), Query Frame = 2 Query: 119 FWSYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAG---LGGMVGATASGVPYYYPPMGQPTGTAGPGGMMIGRPAVDPTGVYVQPPSQAWQSVWQTPA 616 FW Q +EIE+ DFKNH LPLARIKKIMKADEDVRMISAEAP++FA+ACE+FILELT+RSW H EENKRRTLQKNDIAAA+TRTDIFDFLVDIVPR++++DE G G + A A+G PY Y P G T G GM++G P G Y P Q +WQ A Sbjct: 62 FWENQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDLRDEVLGSIPRGTVPEAAAAGYPYGYLPAG--TAPIGNPGMVMGNPG----GAYPPNPYMG-QPMWQQQA 223
BLAST of DY260336 vs. ExPASy Swiss-Prot
Match: NFYC2_ARATH (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana GN=NFYC2 PE=1 SV=2) HSP 1 Score: 193.741 bits (491), Expect = 1.473e-48 Identity = 93/136 (68.38%), Postives = 108/136 (79.41%), Query Frame = 2 Query: 80 HHLIXXXXXXXXMFWSYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAGL-GGMVGATASGVPYYY 484 HH MFW+ Q QEIE DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+R+W+H EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PRDE+K+E G+ G + + PYYY Sbjct: 45 HHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGVTKGTIPSVVGSPPYYY 180
BLAST of DY260336 vs. ExPASy Swiss-Prot
Match: NFYC6_ARATH (Nuclear transcription factor Y subunit C-6 OS=Arabidopsis thaliana GN=NFYC6 PE=2 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.528e-37 Identity = 86/158 (54.43%), Postives = 110/158 (69.62%), Query Frame = 2 Query: 125 SYQRQEIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDE-IKDEAAGLGGMVGATASGVP-YYYPPMGQPTGTAGPGGMMIGRPAVDPTGVYVQPPSQAW 592 +Y +++E +DFKN QLPLARIKKIMKAD DV M+SAEAPI+FAKACE+FI++LT+RSWL AEENKR TLQK+DI+ A+ + +DFL+D+VP+DE I G M GVP YYYPP G+++G P V +G+Y PSQAW Sbjct: 38 NYWIEQMETVSDFKNRQLPLARIKKIMKADPDVHMVSAEAPIIFAKACEMFIVDLTMRSWLKAEENKRHTLQKSDISNAVASSFTYDFLLDVVPKDESIATADPGFVAMPHPDGGGVPQYYYPP-----------GVVMGTPMVG-SGMYA--PSQAW 181
BLAST of DY260336 vs. ExPASy Swiss-Prot
Match: NFYC_RAT (Nuclear transcription factor Y subunit gamma OS=Rattus norvegicus GN=Nfyc PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.697e-34 Identity = 78/138 (56.52%), Postives = 94/138 (68.12%), Query Frame = 2 Query: 119 FWSYQRQEIEQ--ANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAGLGGMVGAT-ASGVPYYYPPMGQPTGTAGPG 523 FW +EI DF+ +LPLARIKKIMK DEDV+MISAEAP+LFAKA ++FI ELT+R+W+H E+NKRRTLQ+NDIA AIT+ D FDFL+DIVPRDE+K T A V YY+ QPT G Sbjct: 22 FWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQG 159
BLAST of DY260336 vs. ExPASy Swiss-Prot
Match: NFYC_MOUSE (Nuclear transcription factor Y subunit gamma OS=Mus musculus GN=Nfyc PE=2 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 2.697e-34 Identity = 78/138 (56.52%), Postives = 94/138 (68.12%), Query Frame = 2 Query: 119 FWSYQRQEIEQ--ANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAGLGGMVGAT-ASGVPYYYPPMGQPTGTAGPG 523 FW +EI DF+ +LPLARIKKIMK DEDV+MISAEAP+LFAKA ++FI ELT+R+W+H E+NKRRTLQ+NDIA AIT+ D FDFL+DIVPRDE+K T A V YY+ QPT G Sbjct: 22 FWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQG 159
BLAST of DY260336 vs. ExPASy Swiss-Prot
Match: NFYC_HUMAN (Nuclear transcription factor Y subunit gamma OS=Homo sapiens GN=NFYC PE=1 SV=3) HSP 1 Score: 146.362 bits (368), Expect = 2.697e-34 Identity = 78/138 (56.52%), Postives = 94/138 (68.12%), Query Frame = 2 Query: 119 FWSYQRQEIEQ--ANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAGLGGMVGAT-ASGVPYYYPPMGQPTGTAGPG 523 FW +EI DF+ +LPLARIKKIMK DEDV+MISAEAP+LFAKA ++FI ELT+R+W+H E+NKRRTLQ+NDIA AIT+ D FDFL+DIVPRDE+K T A V YY+ QPT G Sbjct: 22 FWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQG 159
BLAST of DY260336 vs. ExPASy Swiss-Prot
Match: NFYC_BOVIN (Nuclear transcription factor Y subunit gamma OS=Bos taurus GN=NFYC PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.697e-34 Identity = 78/138 (56.52%), Postives = 94/138 (68.12%), Query Frame = 2 Query: 119 FWSYQRQEIEQ--ANDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAAGLGGMVGAT-ASGVPYYYPPMGQPTGTAGPG 523 FW +EI DF+ +LPLARIKKIMK DEDV+MISAEAP+LFAKA ++FI ELT+R+W+H E+NKRRTLQ+NDIA AIT+ D FDFL+DIVPRDE+K T A V YY+ QPT G Sbjct: 22 FWPRVMEEIRNLTVKDFRVQELPLARIKKIMKLDEDVKMISAEAPVLFAKAAQIFITELTLRAWIHTEDNKRRTLQRNDIAMAITKFDQFDFLIDIVPRDELKPPKRQEEVRQSVTPAEPVQYYFTLAQQPTAVQVQG 159 The following BLAST results are available for this feature:
BLAST of DY260336 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >DY260336 ID=DY260336; Name=DY260336; organism=Citrus clementina; type=EST; length=1049bpback to top |