DY260340

Overview
NameDY260340
Unique NameDY260340
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1266
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1489 contig Ccv1_Contig1489:1..1266. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260340 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 1.450e-64
Identity = 113/224 (50.45%), Postives = 158/224 (70.54%), Query Frame = 2
Query:    2 WFQLIDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIQAGFKGINFECNLCNSYVMEIHK 673
            W+ L D IL+G + +NKA GM  ++Y GTD RFN+VFNNGM   ++  + KI+E+YKGF+ +T LVDV            SKYP++KGINFD+PHVI+DA S+PG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K L+NCY++LP DGKV++    LPE PDS+ +++    +D I L   P G+ERT+KEF ALA  +GFKGI   C+     ++E+ K
Sbjct:  138 WYHLKDAILDGGIPFNKAYGMSAFEYHGTDPRFNKVFNNGMSNHSTITMKKILETYKGFEGLTSLVDVGGGIGATLKMIVSKYPNLKGINFDLPHVIEDAPSHPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYESLPEDGKVILAECILPETPDSSLSTKQVVHVDCIMLAHNPGGKERTEKEFEALAKASGFKGIKVVCDAFGVNLIELLK 361          
BLAST of DY260340 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 2.473e-64
Identity = 114/224 (50.89%), Postives = 156/224 (69.64%), Query Frame = 2
Query:    2 WFQLIDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIQAGFKGINFECNLCNSYVMEIHK 673
            W+ L D +LEG + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+YKGF+ +T +VDV            SKYP IKGINFD+PHVI+DA  YPG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K L+NCY ALP++GKV++    LP  PDS+ A++    +D I L   P G+ERT++EF ALA  AGF+G N  C+  N+YV+E  K
Sbjct:  140 WYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVSKYPSIKGINFDLPHVIEDAPQYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTEQEFQALAKGAGFQGFNVACSAFNTYVIEFLK 363          
BLAST of DY260340 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 3.230e-64
Identity = 112/224 (50.00%), Postives = 156/224 (69.64%), Query Frame = 2
Query:    2 WFQLIDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIQAGFKGINFECNLCNSYVMEIHK 673
            W+ L D +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + K+ ++Y+GFQ +T LVDV            SKYP I+ INFD+PHVI+DA  YPG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K+L+NCY ALPN+GKV++    LPEVPDS+ A++    +D I +   P G+ERT+KEF ALA  AGF+G    CN  N+Y++E  K
Sbjct:  116 WYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQTYQGFQGLTSLVDVGGGTGATLTMILSKYPTIRCINFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of DY260340 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 3.230e-64
Identity = 112/224 (50.00%), Postives = 156/224 (69.64%), Query Frame = 2
Query:    2 WFQLIDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIQAGFKGINFECNLCNSYVMEIHK 673
            W+ L D +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + K+ ++Y+GFQ +T LVDV            SKYP I+ INFD+PHVI+DA  YPG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K+L+NCY ALPN+GKV++    LPEVPDS+ A++    +D I +   P G+ERT+KEF ALA  AGF+G    CN  N+Y++E  K
Sbjct:  116 WYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQAYQGFQGLTSLVDVGGGTGATLTMILSKYPTIRCINFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of DY260340 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 9.399e-64
Identity = 111/224 (49.55%), Postives = 156/224 (69.64%), Query Frame = 2
Query:    2 WFQLIDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIQAGFKGINFECNLCNSYVMEIHK 673
            W+ L D +L+G + +NKA GM  +DY GTD RFN+VFN GM   ++  + KI+E+YKGF+ +T +VDV            SKYP IKGINFD+PHVI+DA  YPG++HVGGDM+  +P+GDAI MKW+ H++ DE+C+K L+NCY ALP++GKV++    LP  PD++ A++    +D + L   P G+ERT++EF ALA  +GF+GI   CN  N+YV+E  K
Sbjct:  140 WYHLKDAVLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDVGGGTGAVVNMIVSKYPSIKGINFDLPHVIEDAPQYPGVQHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363          
BLAST of DY260340 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 1.603e-63
Identity = 113/224 (50.45%), Postives = 153/224 (68.30%), Query Frame = 2
Query:    2 WFQLIDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIQAGFKGINFECNLCNSYVMEIHK 673
            W+ L D +L+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+Y GF+ +  LVDV            SKYP IKGINFD+PHVI+DA SYPG+EHVGGDM+  IP+ DA+ MKW+ H++ DE+C+K L+NCY+ALP++GKV+V    LP  PDS+ A++    +D I L   P G+ERT+KEF  LA  AGF+G    CN  N+Y+ME  K
Sbjct:  140 WYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363          
BLAST of DY260340 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 1.773e-62
Identity = 115/224 (51.34%), Postives = 149/224 (66.52%), Query Frame = 2
Query:    2 WFQLIDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIQAGFKGINFECNLCNSYVMEIHK 673
            W+ L D IL+G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI E Y GF+ +  +VDV            +KYP IKGINFD+PHVI+DA  YPG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K L+NCY ALP  GKV+V    LP  PD + A++    +DAI L   P G+ERT+KEF ALAI AGFKG    C   N+YVME  K
Sbjct:  145 WYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKIFEMYTGFEALNTIVDVGGGTGAVLSMIVAKYPSIKGINFDLPHVIEDAPIYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDAIMLAHNPGGKERTEKEFEALAIGAGFKGFKVACCAFNTYVMEFLK 368          
BLAST of DY260340 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 1.773e-62
Identity = 111/224 (49.55%), Postives = 156/224 (69.64%), Query Frame = 2
Query:    2 WFQLIDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIQAGFKGINFECNLCNSYVMEIHK 673
            W+ L D +LEG + +NKA GM  ++Y G D RFN+VFN GM   ++ ++ KI+E Y+GFQ +  +VDV            SKYP IKGINFD+PHVI+DA SYPG++HVGGDM+  +P+GDAI MKW+ H++ D +C+K L+NC++ALP +GKV++    LPE PDST +++++  +D I L   P G+ERT+KEF ALA  AGF+G    C   NS++ME+ K
Sbjct:  140 WYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVDHVGGDMFVSVPKGDAIFMKWICHDWSDAHCLKFLKNCHEALPENGKVILAECLLPEAPDSTLSTQNTVHVDVIMLAHNPGGKERTEKEFEALAKGAGFRGFIKVCCAYNSWIMELLK 363          
BLAST of DY260340 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 2.315e-62
Identity = 110/224 (49.11%), Postives = 152/224 (67.86%), Query Frame = 2
Query:    2 WFQLIDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIQAGFKGINFECNLCNSYVMEIHK 673
            W+ L D +++G + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+Y GF  +  +VDV            SKYP IKGINFD+PHVI+DA SYPG+EHVGGDM+  +P+GDAI MKW+ H++ DE+C+K L+NCY ALP +GKV++    LPE PD+  A+++   +D I L   P G+ERT+KEF  LA  AGFK  N  C   N+++ME+ K
Sbjct:  138 WYHLSDAVVDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCVKFLKNCYDALPQNGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQGLAKAAGFKQFNKACCAYNTWIMELLK 361          
BLAST of DY260340 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 3.949e-62
Identity = 111/224 (49.55%), Postives = 151/224 (67.41%), Query Frame = 2
Query:    2 WFQLIDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIQAGFKGINFECNLCNSYVMEIHK 673
            W+ L D ILEG + +NKA GM  ++Y GTD RFN+VFN GM   ++  + KI+E+YKGF+ +T LVDV            SKYP IKGINFD+PHVI+DA SYPG+EHVGGDM+  +P  DA+ MKW+ H++ D +C+K L+NCY ALP +GKV+++   LP  PD++ A++    +D I L   P G+ERT+KEF  LA  AGF+G    C   N++V+E  K
Sbjct:  140 WYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPNADAVFMKWICHDWSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLANGAGFQGFEVMCCAFNTHVIEFRK 363          
The following BLAST results are available for this feature:
BLAST of DY260340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
OMT1_ARATH1.450e-6450.45Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]
COMT1_PRUDU2.473e-6450.89Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
OMT2_CHRAE3.230e-6450.00Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE3.230e-6450.00Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT1_ROSCH9.399e-6449.55Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_MEDSA1.603e-6350.45Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_CLABR1.773e-6251.34Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_CATRO1.773e-6249.55Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_OCIBA2.315e-6249.11Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_POPKI3.949e-6249.55Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YD05FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260340 ID=DY260340; Name=DY260340; organism=Citrus clementina; type=EST; length=1266bp
CTGGTTCCAATTGATTGACCAAATTCTTGAAGGAGAACTTTCGTATAATA
AAGCCCTCGGAATGGATTTCTACGATTATCTGGGCACCGACTCCAGGTTC
AATGAAGTTTTCAACAATGGAATGATCGGCCAGACTTCTTTTGTAATCAA
TAAGATTGTAGAATCCTACAAAGGCTTTCAGAATATTACGCGCCTTGTTG
ACGTTGGCGGTGGTTTAGGAATCACCCTTGCGACCATAATTTCCAAATAC
CCTCATATTAAGGGTATTAATTTTGACGTACCTCATGTTATAAAAGATGC
CTCATCTTATCCCGGCATGGAACATGTTGGCGGAGATATGTACCAAAAAA
TTCCAGAGGGGGATGCCATTTTAATGAAGTGGATGCTTCATAATTTTGAT
GATGAGAATTGCATAAAGATACTGAGGAATTGTTACAAAGCTCTTCCAAA
TGATGGAAAGGTACTTGTTATTAACTCAACGTTGCCAGAAGTGCCTGACA
GTACCGAGGCTTCAAGGGATTCCTTCATTTTAGATGCAATTTTTTTAATC
CAAATTCCTCATGGAAGGGAGCGGACCAAAAAGGAGTTCACTGCCTTGGC
AATCCAAGCTGGATTTAAGGGTATCAACTTTGAATGTAACCTTTGCAATT
CCTATGTCATGGAAATCCACAAGTAACTTTGAAGCTAGATTGCTTCCTTC
TTTCCTTATCAGAAAGATGCCCCCTCCCCACTTTAATTTGGAGTGGCCCA
AACCCCCTTTTCCTTTCCGTACCTTCCGTTCTTGTTCGGCCCTTACGGCT
CCCCGGAAACCCCTTAAGCACGGCCTTTGCGCCCTCCACCAAAACAATCC
GCTTCTGGTTCTAGCAACCAAACACCCACCACACAACCCCCCTTCTCTCC
CCAACATGGCCCCTTACTCAAGACCCTATGTTCCCCCTCTCCCGCCACCT
CAGCGCCCAACATCCCCCATACAATCTCTCGATCTCCCCTTTCCGCCTCA
TTCCAAATCCCCTACCGCTGCAATAACAACCAACACCACACCCTCCCGGA
CCCTTCTCTGCCGACCTTCCTGTCTGTTTCACACCAGTACCCGTCGCCAA
TTCGTCCCGACACAACATTACCTCCCCCGTCATCGACAAACCCTTCCTGC
TCAATAGCAACCATCGACCGACAATACTGTATACGACACAACCCACACCT
CGCCCCACTACAAACCATCACCCACCCCATCTCAATCTCCAATACTCACT
CCCACGCCCCACCAAC
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