DY260357
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260357 vs. ExPASy Swiss-Prot
Match: YDHE_SCHPO (Pumilio domain-containing protein C6G9.14 OS=Schizosaccharomyces pombe GN=SPAC6G9.14 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 9.169e-31 Identity = 78/225 (34.67%), Postives = 127/225 (56.44%), Query Frame = 2 Query: 146 SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYPLNEVADNCYGIATEKNGWWVLPPLCSNTPRGPTHSVLGGKIIPHSLPVFQNNVMATKSVEH*LERSVPTKT 820 S +SL NI++ KDQ+GCR+LQR + + I+ +F E + LM+D FGNY+ QKL E SE QR+ + ++ +LV I N HG RA+ K+++ +++P QIS ++ ALRP V LTKD NG++VIQ C+ FS ED ++ + + ++ ++T ++G V+ C + L I+PH+L + Q + +++ LE + P T Sbjct: 335 SSSVASLSLQNSNILSFCKDQHGCRYLQRLLEKKNQSHIDAVFAETHPYLAVLMVDAFGNYLCQKLFEHASEAQRSTFIQIIAP---KLVPISFNMHGTRALQKIIDLVSSPDQISCIVNALRPNVVLLTKDLNGNHVIQKCLNKFSQEDCQFIFDAICEDPLDVSTHRHGCCVV-QRCFDHASPAQIEQLVEHIVPHALTLVQ-DAFGNYVLQYVLELNNPNHT 554
BLAST of DY260357 vs. ExPASy Swiss-Prot
Match: PUF4_YEAST (Pumilio homology domain family member 4 OS=Saccharomyces cerevisiae GN=PUF4 PE=1 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 2.258e-29 Identity = 79/224 (35.27%), Postives = 130/224 (58.04%), Query Frame = 2 Query: 5 NQDSSILNLLHNHNFDGLRSNGNELSSVPRNQWMSSLSLKRNQWLQDS--FDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYPLNEVADNCYGIATEKNGWWVL 670 N +S +N+N + +N N S+ +S S ++ + +++S F + L G+I +L KDQ+GCR LQ+ + L + + IF E D ELM D FGNY++QKL+E + EQR +L +++ F V I LN HG RA+ KL+E + ++ +V+ +LRP V L+KD NG++VIQ C++ E+ ++ + ++D+C IAT ++G VL Sbjct: 511 NMKNSYHGYYNNNNNNNNNNNNNNNSNAT-----NSNSAEKQRKIEESSRFADAVLDQYIGSIHSLCKDQHGCRFLQKQLDILGSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQRI-VLTKISSPHF--VEISLNPHGTRALQKLIECIKTDEEAQIVVDSLRPYTVQLSKDLNGNHVIQKCLQRLKPENFQFIFDAISDSCIDIATHRHGCCVL 726
BLAST of DY260357 vs. ExPASy Swiss-Prot
Match: YAD3_SCHPO (Pumilio domain-containing protein C4G8.03c OS=Schizosaccharomyces pombe GN=SPAC4G8.03c PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.761e-27 Identity = 75/214 (35.05%), Postives = 112/214 (52.34%), Query Frame = 2 Query: 179 GNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYPLNEVADNCYGIATEKNGWWVLPPLCSNTPRGPTHSVLGGKIIPHSLPVFQNNVMATKSVEH*LERSVPTKT 820 G++ + KDQYGCR+LQ+ + PK + F E+ V +LMIDPFGNY+ QKL S EQ+ L ML +V IC N +G R++ +++ LT+ +QISL+L + P TL D NG +V+Q C+ F E + + +N +AT ++G +L C + G L II L + Q N V+H LE ++ T Sbjct: 465 GHLSTICKDQYGCRYLQKLLDENPKVNASLFFPEIRQSVVQLMIDPFGNYMCQKLFVYASREQK---LSMLNGIGEGIVDICSNLYGTRSMQNIIDKLTSNEQISLLLKIIIPSLTTLACDNNGTHVLQKCIAKFPPEKLEPLFLSMEENLITLATNRHGCCIL-QRCLDRTNGDIQERLVNSIIKSCLLLVQ-NAYGNYLVQHVLELNIQPYT 673
BLAST of DY260357 vs. ExPASy Swiss-Prot
Match: MPT5_YEAST (Suppressor protein MPT5 OS=Saccharomyces cerevisiae GN=MPT5 PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 8.051e-19 Identity = 59/184 (32.07%), Postives = 104/184 (56.52%), Query Frame = 2 Query: 164 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEI--EMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALR------PGAVTLTKDTNGHYVIQYCVKHFSHEDTKYPLNEVAD--NCYGIATEKNGWWVLPPLCS 685 LRDL + + LA DQ+GCR LQ+ + + + + ++++ ++ +L++DPFGNY+VQKL + + EQ+T ++ + + FQ I +N +G R++ K+++ + N QI L++ VTL D NG++VIQ C+ FS + ++ + + N I+T K+G VL L S Sbjct: 210 LRDL--DYIKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLILDPFGNYLVQKLCDYLTAEQKTLLIQTIYPNVFQ---ISINQYGTRSLQKIIDTVDNEVQIDLIIKGFSQEFTSIEQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKHGCCVLQKLLS 388
BLAST of DY260357 vs. ExPASy Swiss-Prot
Match: PUF3_YEAST (mRNA-binding protein PUF3 OS=Saccharomyces cerevisiae GN=PUF3 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.373e-18 Identity = 65/227 (28.63%), Postives = 117/227 (51.54%), Query Frame = 2 Query: 5 NQDSSILNLLHNHNFDGLRSNGNELSSVPRNQWMSSLSLKRNQWLQDSFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQ--LVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYPLNEVADNCYGIATEKNGWWVLPPL 679 N+ ++ + H+H+ +S + + R+ + L + ++S SL+D+ G+ + KDQ+G R +QR +++ P E E+IF E+ D EL D FGNYV+QK E S+ Q+ ++ D F+ + ++ L + R + K LE + + Q+I LVL L + + KD NG++VIQ ++ E + L+ + + Y ++T G V+ L Sbjct: 485 NESTANNHKSHSHSHPHSQSLQQQQQTYHRSPLLEQLRNSSSD--KNSNSNMSLKDIFGHSLEFCKDQHGSRFIQRELATSPASEKEVIFNEIRDDAIELSNDVFGNYVIQKFFEFGSKIQKNTLV-----DQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVL-ELSDSVLQMIKDQNGNHVIQKAIETIPIEKLPFILSSLTGHIYHLSTHSYGCRVIQRL 703
BLAST of DY260357 vs. ExPASy Swiss-Prot
Match: PUM2_HUMAN (Pumilio homolog 2 OS=Homo sapiens GN=PUM2 PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 8.902e-18 Identity = 64/234 (27.35%), Postives = 119/234 (50.85%), Query Frame = 2 Query: 125 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYPLNEVADNCYGIATEKNGWWVLPPLCSNTPRGPTHSVLGGKIIPHSLPVFQNNVMATKSVEH*LERSVP 811 R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +M+F E++ +LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++++ QQ IS ++ L + KD NG++V+Q C++ + ++ ++ + ++T G V+ + + T +L ++ H+ + Q+ ++H LE P Sbjct: 707 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQMVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPIL-EELHQHTEQLVQDQ-YGNYVIQHVLEHGRP 935 HSP 2 Score: 71.2478 bits (173), Expect = 1.245e-11 Identity = 48/164 (29.27%), Postives = 86/164 (52.44%), Query Frame = 2 Query: 173 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYPLNEVADNCYGIATEK 652 +RG+++ LA YGCR +Q+ + S+ ++ I + E+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L L +D G+YVIQ+ ++H ED ++E+ ++ K Sbjct: 799 IRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHK 956
BLAST of DY260357 vs. ExPASy Swiss-Prot
Match: PUM2_MOUSE (Pumilio homolog 2 OS=Mus musculus GN=Pum2 PE=1 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 2.590e-17 Identity = 63/234 (26.92%), Postives = 119/234 (50.85%), Query Frame = 2 Query: 125 RNQWLQD----SFDCSSLRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYPLNEVADNCYGIATEKNGWWVLPPLCSNTPRGPTHSVLGGKIIPHSLPVFQNNVMATKSVEH*LERSVP 811 R++ L+D F LRDL G+IV ++DQ+G R +Q+ + E +++F E++ +LM D FGNYV+QK E S +Q+ L + T ++ + L +G R + K LE++++ QQ IS ++ L + KD NG++V+Q C++ + ++ ++ + ++T G V+ + + T +L ++ H+ + Q+ ++H LE P Sbjct: 707 RSRLLEDFRNNRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQK---LALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLPIL-EELHQHTEQLVQDQ-YGNYVIQHVLEHGRP 935 HSP 2 Score: 71.2478 bits (173), Expect = 1.245e-11 Identity = 48/164 (29.27%), Postives = 86/164 (52.44%), Query Frame = 2 Query: 173 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYPLNEVADNCYGIATEK 652 +RG+++ LA YGCR +Q+ + S+ ++ I + E+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++LE+ T Q + +L L L +D G+YVIQ+ ++H ED ++E+ ++ K Sbjct: 799 IRGHVLPLALQMYGCRVIQKALESISSDQQVISEMVKELDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFVLSTHPYGCRVIQRILEHCTAEQTLP-ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVSEIRGKVLALSQHK 956
BLAST of DY260357 vs. ExPASy Swiss-Prot
Match: PUM_DROME (Maternal protein pumilio OS=Drosophila melanogaster GN=pum PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 3.383e-17 Identity = 51/185 (27.57%), Postives = 95/185 (51.35%), Query Frame = 2 Query: 164 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYPLNEVADNCYGIATEKNGWWVLPPLCSNTPRGPTHSVL 718 LRDL +IV ++DQ+G R +Q+ + E +M+F E++ LM D FGNYV+QK E + EQ+ + + + ++++ L +G R + K LE++ +P+Q ++ L + KD NG++V+Q C++ ++ +N Y ++T G V+ + + T +L Sbjct: 1109 LRDLANHIVEFSQDQHGSRFIQQKLERATAAEKQMVFSEILAAAYSLMTDVFGNYVIQKFFEFGTPEQKNTLGMQVKG---HVLQLALQMYGCRVIQKALESI-SPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSLSTHPYGCRVIQRILEHCTAEQTTPIL 1289 HSP 2 Score: 72.4034 bits (176), Expect = 5.589e-12 Identity = 54/217 (24.88%), Postives = 105/217 (48.39%), Query Frame = 2 Query: 173 LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYPLNEVADNCYGIATEKNGWWVLPPLCSNTPRGPTHSVLGG--KIIPHSLPVFQNNVMATKSVEH*LERSVPTK 817 ++G+++ LA YGCR +Q+ + S+ E+ + I E+ V + + D GN+VVQK +E C + + ++ Q+ + + +G R + ++LE+ T +Q + +L L L +D G+YVIQ+ ++H ED +N V ++ K V+ ++ RG ++ ++L V + A V+ ++ S PT+ Sbjct: 1184 VKGHVLQLALQMYGCRVIQKALESISPEQQQEIVHELDGHVLKCVKDQNGNHVVQKCIE-CVDPVALQFIINAFKG--QVYSLSTHPYGCRVIQRILEHCT-AEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALHVMMKDQYANYVVQKMIDVSEPTQ 1396
BLAST of DY260357 vs. ExPASy Swiss-Prot
Match: PUM1_MOUSE (Pumilio homolog 1 OS=Mus musculus GN=Pum1 PE=1 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 6.379e-16 Identity = 46/170 (27.06%), Postives = 91/170 (53.53%), Query Frame = 2 Query: 164 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQ-ISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYPLNEVADNCYGIATEKNGWWVL 670 LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK E S EQ+ + + ++ + L +G R + K LE + + QQ I+ ++ L + KD NG++V+Q C++ + ++ ++ + ++T G V+ Sbjct: 847 LREIAGHIMEFSQDQHGSRFIQLKLERATAAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSHEQKLALAERIRG---HVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVI 1013 HSP 2 Score: 72.0182 bits (175), Expect = 7.299e-12 Identity = 49/164 (29.88%), Postives = 86/164 (52.44%), Query Frame = 2 Query: 173 LRGNIVALAKDQYGCRHLQRTMSSLPKEE--IEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYPLNEVADNCYGIATEK 652 +RG++++LA YGCR +Q+ + +P ++ I + E+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L L +D G+YVIQ+ ++H ED + E+ N ++ K Sbjct: 922 IRGHVLSLALQMYGCRVIQKALEFIPSDQQVINEMVRELDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHK 1079
BLAST of DY260357 vs. ExPASy Swiss-Prot
Match: PUM1_PONAB (Pumilio homolog 1 OS=Pongo abelii GN=PUM1 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.856e-15 Identity = 46/169 (27.22%), Postives = 89/169 (52.66%), Query Frame = 2 Query: 164 LRDLRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTHGIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYPLNEVADNCYGIATEKNGWWVL 670 LR++ G+I+ ++DQ+G R +Q + E +++F E++ +LM+D FGNYV+QK E S EQ+ + + ++ + L +G R + K LE + + QQ +V L + KD NG++V+Q C++ + ++ ++ + ++T G V+ Sbjct: 846 LREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQLMVDVFGNYVIQKFFEFGSLEQKLALAERIRG---HVLSLALQMYGCRVIQKALEFIPSDQQNEMV-RELDGHVLKCVKDQNGNHVVQKCIECVQPQSLQFIIDAFKGQVFALSTHPYGCRVI 1010 HSP 2 Score: 75.0998 bits (183), Expect = 8.622e-13 Identity = 53/184 (28.80%), Postives = 92/184 (50.00%), Query Frame = 2 Query: 128 NQWLQDSFDCSSLRD-------LRGNIVALAKDQYGCRHLQRTMSSLPKEEIEMIFVEVIDRVCELMIDPFGNYVVQKLVELCSEEQRTRILLMLTNDDFQLVRICLNTH--GIRAVLKLLENLTNPQQISLVLAALRPGAVTLTKDTNGHYVIQYCVKHFSHEDTKYPLNEVADNCYGIATEK 652 N +Q F+ SL +RG++++LA YGCR +Q+ + +P ++ + E+ V + + D GN+VVQK +E C + Q + ++ D F+ L+TH G R + ++LE+ P Q +L L L +D G+YVIQ+ ++H ED + E+ N ++ K Sbjct: 899 NYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMVRELDGHVLKCVKDQNGNHVVQKCIE-CVQPQSLQFII----DAFKGQVFALSTHPYGCRVIQRILEHCL-PDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVLSQHK 1076 The following BLAST results are available for this feature:
BLAST of DY260357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260357 ID=DY260357; Name=DY260357; organism=Citrus clementina; type=EST; length=1144bpback to top |