DY260367

Overview
NameDY260367
Unique NameDY260367
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1303
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY260367_ssr435 microsatellite DY260367_ssr435:435..446. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig857 contig Ccv1_Contig857:28..1328. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260367 vs. ExPASy Swiss-Prot
Match: ITH5_CUCMA (Inhibitor of trypsin and hageman factor OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.930e-19
Identity = 44/66 (66.67%), Postives = 53/66 (80.30%), Query Frame = 3
Query:  207 CPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTKDYRIDRVRVWVNKKGKVIRVPRIG 404
            CP KSSWP LVG  G VA AIIE++NP V A++L EGTPVTKD+R +RVR+WVNK+G V+  PRIG
Sbjct:    3 CPGKSSWPHLVGVGGSVAKAIIERQNPNVKAVILEEGTPVTKDFRCNRVRIWVNKRGLVVSPPRIG 68          
BLAST of DY260367 vs. ExPASy Swiss-Prot
Match: BGIA_MOMCH (Glu S.griseus protease inhibitor OS=Momordica charantia PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 6.424e-15
Identity = 37/66 (56.06%), Postives = 47/66 (71.21%), Query Frame = 3
Query:  207 CPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTKDYRIDRVRVWVNKKGKVIRVPRIG 404
            C  K SWP+LVG  G  A A+IE+ENP V A+++  G+PVT D+R DRVRVWV ++G V R P IG
Sbjct:    3 CQGKRSWPQLVGSTGAAAKAVIERENPRVRAVIVRVGSPVTADFRCDRVRVWVTERGIVARPPAIG 68          
BLAST of DY260367 vs. ExPASy Swiss-Prot
Match: ICI_LINUS (Proteinase inhibitor OS=Linum usitatissimum PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 8.390e-15
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 3
Query:  207 CPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTKDYRIDRVRVWVNKKGKVIRVPRI 401
            CP K++WPELVGK+G +AAA +E+EN  VHAIVL EG+ +TKD+R DRV V VN  G V  VP I
Sbjct:    4 CPGKNAWPELVGKSGNMAAATVERENRNVHAIVLKEGSAMTKDFRCDRVWVIVNDHGVVTSVPHI 68          
BLAST of DY260367 vs. ExPASy Swiss-Prot
Match: HPI_HEVBR (Protease inhibitor HPI OS=Hevea brasiliensis GN=PI1 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 7.103e-14
Identity = 38/69 (55.07%), Postives = 50/69 (72.46%), Query Frame = 3
Query:  198 AFDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTKDYRIDRVRVWVNKKGKVIRVPRIG 404
            A  CP K+SWPELVG NG++AA II+ EN  V AIV+ EG P+T+D   +RVRV+V++   V +VP IG
Sbjct:    2 ASQCPVKNSWPELVGTNGDIAAGIIQTENANVKAIVVKEGLPITQDLNFNRVRVFVDENRVVTQVPAIG 70          
BLAST of DY260367 vs. ExPASy Swiss-Prot
Match: ATSI_AMACA (Trypsin/subtilisin inhibitor OS=Amaranthus caudatus PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.340e-12
Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = 3
Query:  198 AFDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAIVLLEGTPVTKDYRIDRVRVWVNKKGKVIRVPRI 401
            A +CP K  WPELVG+ G  AAAIIE+ENP V +IV  E +  TKD+R DRV V V+  G V+R PR+
Sbjct:    1 ARECPGKQEWPELVGEYGYKAAAIIERENPNVRSIVKHERSGFTKDFRCDRVWVVVDSTGVVVRTPRV 68          
BLAST of DY260367 vs. ExPASy Swiss-Prot
Match: ICI1_SOLPE (Wound-induced proteinase inhibitor 1 OS=Solanum peruvianum PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.285e-12
Identity = 39/83 (46.99%), Postives = 54/83 (65.06%), Query Frame = 3
Query:  174 DGPNLV--MSAFD----CPRKSSWPELVGKNGEVAAAIIEKENPCVHAI-VLLEGTPVTKDYRIDRVRVWVNKKGKVIRVPRI 401
            DGP ++  +  F+    C  K  WPEL+G     A  IIEKENP +  I +LL G+PVTKD+R DRVR++VN  G V+++PR+
Sbjct:   28 DGPEVIKLLKEFESDSRCKGKQFWPELIGVPALYAKGIIEKENPSITNIPILLNGSPVTKDFRCDRVRLFVNILGDVVQIPRV 110          
BLAST of DY260367 vs. ExPASy Swiss-Prot
Match: ICID_SOLTU (Wound-induced proteinase inhibitor 1 OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.134e-11
Identity = 35/79 (44.30%), Postives = 52/79 (65.82%), Query Frame = 3
Query:  174 DGPNLV--MSAFDCPRKSSWPELVGKNGEVAAAIIEKENPCVHAI-VLLEGTPVTKDYRIDRVRVWVNKKGKVIRVPRI 401
            DGP ++     F+C  K  WPEL+G   ++A  IIEKEN  +  + +LL G+PVT DYR +RVR++ N  G V+++PR+
Sbjct:   28 DGPEVIELQKEFECNGKQRWPELIGVPTKLAKGIIEKENSLITNVQILLNGSPVTMDYRCNRVRLFDNILGDVVQIPRV 106          
The following BLAST results are available for this feature:
BLAST of DY260367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
ITH5_CUCMA1.930e-1966.67Inhibitor of trypsin and hageman factor OS=Cucurbi... [more]
BGIA_MOMCH6.424e-1556.06Glu S.griseus protease inhibitor OS=Momordica char... [more]
ICI_LINUS8.390e-1561.54Proteinase inhibitor OS=Linum usitatissimum PE=1 S... [more]
HPI_HEVBR7.103e-1455.07Protease inhibitor HPI OS=Hevea brasiliensis GN=PI... [more]
ATSI_AMACA1.340e-1255.88Trypsin/subtilisin inhibitor OS=Amaranthus caudatu... [more]
ICI1_SOLPE2.285e-1246.99Wound-induced proteinase inhibitor 1 OS=Solanum pe... [more]
ICID_SOLTU1.134e-1144.30Wound-induced proteinase inhibitor 1 OS=Solanum tu... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP12YE10FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260367 ID=DY260367; Name=DY260367; organism=Citrus clementina; type=EST; length=1303bp
CGAAATAACAATTCTTTGCAATGAAGAGTTCATTACCAGCACTCGCCCTT
TTCTTCTTTCTCTTGGCCTTCGCCGCAAAACCGTCTTTGGCCGCTCGTCA
CGAGCCTTGCCTGACCGATGGCAAGGAGCTTGGCTCTGAAGTCATCGTAT
CTGCATTGAAAGGAGTTGTGGAAGATGGACCAAACCTAGTCATGTCTGCA
TTTGATTGTCCACGCAAGAGCTCATGGCCAGAGCTGGTTGGTAAAAACGG
GGAGGTTGCTGCTGCTATTATAGAGAAAGAGAATCCTTGTGTTCATGCAA
TCGTATTACTTGAGGGAACTCCAGTTACTAAGGACTATAGGATTGACAGG
GTTCGTGTTTGGGTCAACAAGAAAGGGAAGGTGATTAGGGTTCCTCGTAT
TGGTTGAATTTCCTCCATCTACTATCTCATAACTAATAAATAAATAAATG
AAATAAGTGTTGTTGTGGGCTATGAGATAATGCATGCTTGGACTAATTTG
CTCCTTGAATATGTTGCCCCGTCCAAGCAATACATGAATCGTGTTCCTTA
ACAAAAAACATAATATTACCCTTAATTACCTGAAAAAAAAAAAAAAAAAC
ACAACCCCTCCCTCTCTGCTCAAAAGTCANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTTCTCCCCCCACCGCGCCACGACCCCATCCACAAAAAACT
TATATTTCCCCACCCCGACCAAACTCCCCACGTAGCGCCACCCCACTAAC
CGACCACAACCCACAACTACGTCCCCACACCACCCTCACGCAAACTTACA
CGAAAGGACAGCGGGACCCGCGCTATGACATACAAACCAGAAAACAAAAA
GTGATGCTACATTCTGCCACCGCCCTCCGCCTTACCCACCACCGGCTACA
TCTCCTTCTTACCCCTCTACTCCCCCTGTCCACTCTCCCTCGTATAAAAG
TCCGTACCAATTCCCGACGACGCCAACCCAGCCACACCCTCTACCCCGCT
AGGTACCTCCTTCACTCCCCTGTCAGCACCATCAACCGACTACCCTCCCT
CATCTCCCCCCTCCCCCAACGCCCCTTCTCTACCACCGCTCCCGCTCACC
AACCTCACCCCTCACCCTGATCCCGCCCATCACCTGCCCAATCACAATCG
CACTCGACGCACCTTGTCCCCATACTTGTCGTCGATCATGCTACGCTCCC
TTCACTCCTCTCTAACTCCTCGCTCACCCTCACAGCCTCTACGAACACGC
CAGAGACCCTACTGCCACAACCACTGGTGGCGCTAATGACTCCCGACTCC
CAA
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