DY260376
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY260376 vs. ExPASy Swiss-Prot
Match: ROAA_HUMAN (Heterogeneous nuclear ribonucleoprotein A/B OS=Homo sapiens GN=HNRNPAB PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.340e-13 Identity = 51/147 (34.69%), Postives = 71/147 (48.30%), Query Frame = 1 Query: 226 KKIFVGRL-PQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRV-SRRSHEICGQQVAIDSATPLD---------DAGPSQNFMMNAAETFGGYGGPMRTYGRMYGNLDFDDWGYGMGSGRPSRGDWKYRPY 633 KKIFVG L P+ T E +R YF FG I + +P DPK RGF F+TF EE +V ++ H + G + I A P + ++N + GG GG +++ + YGN +GY G G P G + Y PY Sbjct: 153 KKIFVGGLNPESPTEEKIREYFGEFGEIEAIELPMDPKLNKRRGFVFITFKEEEPVKKVLEKKFHTVSGSKCEIKVAQPKEVYQQQQYGSGGRGNRNRGNRGSGGGGGGGGQSQSWNQGYGNYWNQGYGYQQGYG-PGYGGYDYSPY 298
BLAST of DY260376 vs. ExPASy Swiss-Prot
Match: SQD_DROME (RNA-binding protein squid OS=Drosophila melanogaster GN=sqd PE=1 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 3.301e-12 Identity = 49/162 (30.25%), Postives = 74/162 (45.68%), Query Frame = 1 Query: 229 KIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTF-AEEVVADRVSRRSHEICGQQVAIDSATPLDD--------AGP---------------SQNFMMNAAETFGGYGGPMRTYGR----------MYGNLDFDDWGYGMGSGRPSRG 612 KIFVG L E + E+++ YF +FG I++V +P D +++ +GF F+TF +E+VV D + +I G++V + ATP + GP N + ++GGYGG YG Y D+ GYG G G G Sbjct: 137 KIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLLKTPKQKIAGKEVDVKRATPKPENQMMGGMRGGPRGGMRGGRGGYGGRGGYNNQWDGQGSYGGYGGGYGGYGAGGYGDYYAGGYYNGYDYGYDGYGYGGGFEGNG 298
BLAST of DY260376 vs. ExPASy Swiss-Prot
Match: RB27C_DROME (Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila melanogaster GN=Hrb27C PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.638e-11 Identity = 38/128 (29.69%), Postives = 63/128 (49.22%), Query Frame = 1 Query: 223 GKKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFAEEVVADRVSRRSH-EICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGNLDFDDWGYGMGSGRP 603 G K+F+G LP T DLR +F+R+G++ +V + D ++ RGFGF++F EE + V+ + + G+QV I A P D +G + +G G +G + ++ G G P Sbjct: 95 GYKVFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLNGKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPP 222
BLAST of DY260376 vs. ExPASy Swiss-Prot
Match: HNDLB_XENLA (Heterogeneous nuclear ribonucleoprotein D-like-B OS=Xenopus laevis GN=hnrpdl-B PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 6.226e-11 Identity = 49/137 (35.77%), Postives = 65/137 (47.45%), Query Frame = 1 Query: 226 KKIFVGRLPQEATAEDLRRYFSRFGRILDVYVPKDPKRTGHRGFGFVTFA-EEVVADRVSRRSHEICGQQVAIDSATPLDDAGPSQNFMMNAAETFGGYGGPMRTYGRMYGNLDFDDWGYGMGSGRPSRGDWKYRPY 633 KK+FVG L E T E +++YF FG I ++ +P D K RGF FVT+ EE V + R H+I + I +A P + Q + GG GG R GR G ++ D YG S GD Y Y Sbjct: 119 KKVFVGGLSPETTEEQIKQYFGGFGEIENIELPMDTKTNERRGFCFVTYTDEEPVQKLLESRFHQIGTGKCEIKAAQPKEVYRQQQQ-----KQQKGGRGG-TRGRGRGQGYSNYYDQNYGGYGNNDSYGDQGYGGY 249 The following BLAST results are available for this feature:
BLAST of DY260376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY260376 ID=DY260376; Name=DY260376; organism=Citrus clementina; type=EST; length=1149bpback to top |