DY260438

Overview
NameDY260438
Unique NameDY260438
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1232
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14751 contig Ccv1_Contig14751:472..1703. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260438 vs. ExPASy Swiss-Prot
Match: EDL16_ARATH (Sugar transporter ERD6-like 16 OS=Arabidopsis thaliana GN=At5g18840 PE=2 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 8.013e-52
Identity = 114/202 (56.44%), Postives = 130/202 (64.36%), Query Frame = 2
Query:    2 WLAVFFSNGSLLLDIGRFFTGYGIGVFSYVVPIFIAEIAPXXXXXXXXXXXXXXIVTGSSVAYIIGSIIPWRIXXXXXXXXXXXXXXXXXXXXESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGIKGIGFYYK*NPLC*LVFPLENSGTILYACVR 607
            WLAVFF+ G+LLLD+GRFFTGYGIGVFSYVVP++IAEI+P              IV GSSV+++IGS+I W+                     ESPRWLAK G +KEF+VAL+KLRGKDADIT EA  IQV I  L  LPKA I+DL   KY RSVIIGVSLMV QQFVGI GIGFY          F     GTI  ACV+
Sbjct:  125 WLAVFFTKGALLLDVGRFFTGYGIGVFSYVVPVYIAEISPKNLRGGLTTLNQLMIVIGSSVSFLIGSLISWKTLALTGLAPCIVLLFGLCFIPESPRWLAKAGHEKEFRVALQKLRGKDADITNEADGIQVSIQALEILPKARIQDLVSKKYGRSVIIGVSLMVFQQFVGINGIGFYAS-ETFVKAGFTSGKLGTIAIACVQ 325          
BLAST of DY260438 vs. ExPASy Swiss-Prot
Match: ERDL7_ARATH (Sugar transporter ERD6-like 7 OS=Arabidopsis thaliana GN=At2g48020 PE=2 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 8.582e-46
Identity = 97/177 (54.80%), Postives = 114/177 (64.41%), Query Frame = 2
Query:    2 WLAVFFSNGSLLLDIGRFFTGYGIGVFSYVVPIFIAEIAPXXXXXXXXXXXXXXIVTGSSVAYIIGSIIPWRIXXXXXXXXXXXXXXXXXXXXESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGIKGIGFY 532
            WLA+ F+ G + LD+GR  TGYG+G FSYVVPIFIAEIAP              I TG SV++IIG+++ WR+                    ESPRWLAKVG D EF+ ALRKLRGK ADI+ EAAEIQ YI TL  LPKA + DLF+ +YIRSV+I   LMV QQF GI GI FY
Sbjct:  109 WLAIIFAKGVVALDLGRLATGYGMGAFSYVVPIFIAEIAPKTFRGALTTLNQILICTGVSVSFIIGTLVTWRVLALIGIIPCAASFLGLFFIPESPRWLAKVGRDTEFEAALRKLRGKKADISEEAAEIQDYIETLERLPKAKMLDLFQRRYIRSVLIAFGLMVFQQFGGINGICFY 285          
BLAST of DY260438 vs. ExPASy Swiss-Prot
Match: ERDL5_ARATH (Sugar transporter ERD6-like 5 OS=Arabidopsis thaliana GN=At1g54730 PE=2 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 7.780e-39
Identity = 82/177 (46.33%), Postives = 110/177 (62.15%), Query Frame = 2
Query:    2 WLAVFFSNGSLLLDIGRFFTGYGIGVFSYVVPIFIAEIAPXXXXXXXXXXXXXXIVTGSSVAYIIGSIIPWRIXXXXXXXXXXXXXXXXXXXXESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGIKGIGFY 532
            WLA++ S  ++ LD+GRF  GYG+GVFS+VVP++IAEI P              I  G SV Y++GS I WRI                    ESPRWLAKVG  +EF++AL++LRG+ ADI+ E+ EI+ Y   L  L + SI DLF+ +Y +S+++GV LMVLQQF G+ GI FY
Sbjct:  113 WLAIYLSKVAIWLDVGRFLVGYGMGVFSFVVPVYIAEITPKGLRGGFTTVHQLLICLGVSVTYLLGSFIGWRILALIGMIPCVVQMMGLFVIPESPRWLAKVGKWEEFEIALQRLRGESADISYESNEIKDYTRRLTDLSEGSIVDLFQPQYAKSLVVGVGLMVLQQFGGVNGIAFY 289          
BLAST of DY260438 vs. ExPASy Swiss-Prot
Match: ERDL8_ARATH (Sugar transporter ERD6-like 8 OS=Arabidopsis thaliana GN=At3g05150 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.123e-37
Identity = 80/177 (45.20%), Postives = 104/177 (58.76%), Query Frame = 2
Query:    2 WLAVFFSNGSLLLDIGRFFTGYGIGVFSYVVPIFIAEIAPXXXXXXXXXXXXXXIVTGSSVAYIIGSIIPWRIXXXXXXXXXXXXXXXXXXXXESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGIKGIGFY 532
            WL ++ + G + LD GRF TGYG G  S+VVP+FIAEI+P              IV G +  ++IG+++ WR                     ESPRWL  VG   +F++AL+KLRG  A+ITREA EIQ Y+ +L  LPKA++ DL   K IR VI+GV LM  QQFVGI G+ FY
Sbjct:  116 WLIIYLAKGDVPLDFGRFLTGYGCGTLSFVVPVFIAEISPRKLRGALATLNQLFIVIGLASMFLIGAVVNWRTLALTGVAPCVVLFFGTWFIPESPRWLEMVGRHSDFEIALQKLRGPQANITREAGEIQEYLASLAHLPKATLMDLIDKKNIRFVIVGVGLMFFQQFVGINGVIFY 292          
BLAST of DY260438 vs. ExPASy Swiss-Prot
Match: EDL10_ARATH (Sugar transporter ERD6-like 10 OS=Arabidopsis thaliana GN=At3g05160 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 5.400e-32
Identity = 71/177 (40.11%), Postives = 101/177 (57.06%), Query Frame = 2
Query:    2 WLAVFFSNGSLLLDIGRFFTGYGIGVFSYVVPIFIAEIAPXXXXXXXXXXXXXXIVTGSSVAYIIGSIIPWRIXXXXXXXXXXXXXXXXXXXXESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGIKGIGFY 532
            WL++ F+   L LD+GR   G G+G+ SYVVP++IAEI P                +G S+ Y  G++I WR+                    ESPRWLAK+G  KE + +L +LRGKDAD++ EAAEIQV    L    K+S  D+F+ KY R++++G+ LM++QQ  G  GI +Y
Sbjct:  102 WLSIAFAKNVLWLDLGRISLGIGVGLTSYVVPVYIAEITPKHVRGAFSASTLLLQNSGISLIYFFGTVINWRVLAVIGALPCFIPVIGIYFIPESPRWLAKIGSVKEVENSLHRLRGKDADVSDEAAEIQVMTKMLEEDSKSSFCDMFQKKYRRTLVVGIGLMLIQQLSGASGITYY 278          
BLAST of DY260438 vs. ExPASy Swiss-Prot
Match: EDL11_ARATH (Sugar transporter ERD6-like 11 OS=Arabidopsis thaliana GN=At3g05165 PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 9.211e-32
Identity = 69/177 (38.98%), Postives = 99/177 (55.93%), Query Frame = 2
Query:    2 WLAVFFSNGSLLLDIGRFFTGYGIGVFSYVVPIFIAEIAPXXXXXXXXXXXXXXIVTGSSVAYIIGSIIPWRIXXXXXXXXXXXXXXXXXXXXESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGIKGIGFY 532
            WL++ F+     LD+GR   G G+G+ SYVVP++IAEI P                +G S+ Y  G++I WR+                    ESPRWLAK+ L KE + +L +LRGKD D++ EAAEIQV    L    K+S  D+F+ KY R++++G+ LM++QQ  G  GI +Y
Sbjct:  111 WLSIAFAKNVFWLDLGRISLGIGVGLISYVVPVYIAEITPKHVRGAFTASNQLLQNSGVSLIYFFGTVINWRVMAVIGAIPCILQTIGIFFIPESPRWLAKIRLSKEVESSLHRLRGKDTDVSGEAAEIQVMTKMLEEDSKSSFSDMFQKKYRRTLVVGIGLMLIQQLSGASGITYY 287          
BLAST of DY260438 vs. ExPASy Swiss-Prot
Match: ERDL9_ARATH (Sugar transporter ERD6-like 9 OS=Arabidopsis thaliana GN=At3g05155 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 7.798e-31
Identity = 70/177 (39.55%), Postives = 98/177 (55.37%), Query Frame = 2
Query:    2 WLAVFFSNGSLLLDIGRFFTGYGIGVFSYVVPIFIAEIAPXXXXXXXXXXXXXXIVTGSSVAYIIGSIIPWRIXXXXXXXXXXXXXXXXXXXXESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGIKGIGFY 532
            WLA+  +   + LD+GRFF G G+G+ SYVVP++IAEI P                 G + AY +G+ + WRI                    ESPRWLAK G D+E +V L+KLRG +ADI +E  EI   ++++ +    S+R LFK KY   + IG+ LM+LQQ  G  G+G+Y
Sbjct:  108 WLAIALAKNIIWLDLGRFFVGIGVGLLSYVVPVYIAEITPKTVRGTFTFSNQLLQNCGVATAYYLGNFMSWRIIALIGILPCLIQLVGLFFVPESPRWLAKEGRDEECEVVLQKLRGDEADIVKETQEI---LISVEASANISMRSLFKKKYTHQLTIGIGLMLLQQLSGSAGLGYY 281          
BLAST of DY260438 vs. ExPASy Swiss-Prot
Match: EDL17_ARATH (Sugar transporter ERD6-like 17 OS=Arabidopsis thaliana GN=SFP1 PE=2 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 1.921e-29
Identity = 69/177 (38.98%), Postives = 99/177 (55.93%), Query Frame = 2
Query:    2 WLAVFFSNGSLLLDIGRFFTGYGIGVFSYVVPIFIAEIAPXXXXXXXXXXXXXXIVTGSSVAYIIGSIIPWRIXXXXXXXXXXXXXXXXXXXXESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGIKGIGFY 532
            WL++ F+   +LL+ GR  +G G G+ SYVVP++IAEI P                 G ++ Y  G+ I WR                     ESPRWLAKVG DKE + +L +LRG+DADI+REA+EIQV    + +  K+S  DLF+ KY  ++++G+ LM++QQF G   +  Y
Sbjct:  112 WLSIAFAKEVVLLNFGRIISGIGFGLTSYVVPVYIAEITPKHVRGTFTFSNQLLQNAGLAMIYFCGNFITWRTLALLGALPCFIQVIGLFFVPESPRWLAKVGSDKELENSLFRLRGRDADISREASEIQVMTKMVENDSKSSFSDLFQRKYRYTLVVGIGLMLIQQFSGSAAVISY 288          
BLAST of DY260438 vs. ExPASy Swiss-Prot
Match: EDL13_ARATH (Putative sugar transporter ERD6-like 13 OS=Arabidopsis thaliana GN=At3g20460 PE=3 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 1.921e-29
Identity = 69/177 (38.98%), Postives = 96/177 (54.24%), Query Frame = 2
Query:    2 WLAVFFSNGSLLLDIGRFFTGYGIGVFSYVVPIFIAEIAPXXXXXXXXXXXXXXIVTGSSVAYIIGSIIPWRIXXXXXXXXXXXXXXXXXXXXESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGIKGIGFY 532
            WL + FS  +  LDIGR F G   GV SYVVP++I EIAP              +    +V Y++GS+I W+                     ESPRWL++ G  KE +V+L++LRG + DIT+EAAEI+ Y+  L+   +    DLF  +Y R V +G+ L+VLQQ  G+ G  FY
Sbjct:  134 WLMIAFSQATWSLDIGRLFLGVAAGVASYVVPVYIVEIAPKKVRGTFSAINSLVMCASVAVTYLLGSVISWQKLALISTVPCVFEFVGLFFIPESPRWLSRNGRVKESEVSLQRLRGNNTDITKEAAEIKKYMDNLQEFKEDGFFDLFNPRYSRVVTVGIGLLVLQQLGGLSGYTFY 310          
BLAST of DY260438 vs. ExPASy Swiss-Prot
Match: ERD6_ARATH (Sugar transporter ERD6 OS=Arabidopsis thaliana GN=ERD6 PE=1 SV=3)

HSP 1 Score: 129.798 bits (325), Expect = 3.276e-29
Identity = 69/177 (38.98%), Postives = 97/177 (54.80%), Query Frame = 2
Query:    2 WLAVFFSNGSLLLDIGRFFTGYGIGVFSYVVPIFIAEIAPXXXXXXXXXXXXXXIVTGSSVAYIIGSIIPWRIXXXXXXXXXXXXXXXXXXXXESPRWLAKVGLDKEFQVALRKLRGKDADITREAAEIQVYILTLRSLPKASIRDLFKSKYIRSVIIGVSLMVLQQFVGIKGIGFY 532
            WL V  +  ++ LD GR   G G+G+FSYV+P++IAEIAP                 G S+ +IIG+ IPWR+                    ESPRWLAK+G DKE + +L++LRG D DI+REA  I+  I    +  +  + +LF+ +Y   +IIGV LM LQQ  G  G+ +Y
Sbjct:  139 WLCVALAQNAMWLDCGRLLLGIGVGIFSYVIPVYIAEIAPKHVRGSFVFANQLMQNCGISLFFIIGNFIPWRLLTVVGLVPCVFHVFCLFFIPESPRWLAKLGRDKECRSSLQRLRGSDVDISREANTIRDTIDMTENGGETKMSELFQRRYAYPLIIGVGLMFLQQLCGSSGVTYY 315          
The following BLAST results are available for this feature:
BLAST of DY260438 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
EDL16_ARATH8.013e-5256.44Sugar transporter ERD6-like 16 OS=Arabidopsis thal... [more]
ERDL7_ARATH8.582e-4654.80Sugar transporter ERD6-like 7 OS=Arabidopsis thali... [more]
ERDL5_ARATH7.780e-3946.33Sugar transporter ERD6-like 5 OS=Arabidopsis thali... [more]
ERDL8_ARATH1.123e-3745.20Sugar transporter ERD6-like 8 OS=Arabidopsis thali... [more]
EDL10_ARATH5.400e-3240.11Sugar transporter ERD6-like 10 OS=Arabidopsis thal... [more]
EDL11_ARATH9.211e-3238.98Sugar transporter ERD6-like 11 OS=Arabidopsis thal... [more]
ERDL9_ARATH7.798e-3139.55Sugar transporter ERD6-like 9 OS=Arabidopsis thali... [more]
EDL17_ARATH1.921e-2938.98Sugar transporter ERD6-like 17 OS=Arabidopsis thal... [more]
EDL13_ARATH1.921e-2938.98Putative sugar transporter ERD6-like 13 OS=Arabido... [more]
ERD6_ARATH3.276e-2938.98Sugar transporter ERD6 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YH21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260438 ID=DY260438; Name=DY260438; organism=Citrus clementina; type=EST; length=1232bp
GTGGCTAGCTGTATTTTTCTCAAATGGATCTTTGTTACTTGACATTGGAA
GATTTTTCACAGGATATGGGATTGGAGTTTTCTCTTATGTGGTTCCAATA
TTTATAGCTGAAATAGCACCGAGGAATCTCCGTGGACTACTTACAACATT
GAATCAGCTCCTTATTGTTACTGGATCTTCAGTTGCGTACATAATAGGAT
CAATCATTCCATGGAGAATTCTGGCTCTGACTGGACTTGTTCCATGCGTT
TTGCTGCTTGTGGGTCTGTGCTTTGTTCCGGAGTCCCCTAGATGGCTGGC
AAAGGTTGGACTTGACAAAGAATTTCAGGTTGCTCTGCGAAAACTTCGTG
GCAAAGATGCCGATATTACTCGCGAAGCAGCTGAAATCCAAGTTTATATC
CTTACTCTTCGAAGCCTTCCAAAAGCTAGTATCCGGGATCTGTTCAAAAG
CAAATATATCCGCTCTGTGATTATTGGGGTGTCATTGATGGTATTACAAC
AGTTTGTTGGAATTAAGGGAATTGGATTCTATTACAAGTGAAACCCTTTG
TGCTAGCTGGTCTTTCCTCTGGAAAACTCCGGAACTATACTTTATGCCTG
TGTCAGGTTCCGATTACTGTAGTAGGTGATTTTTCTATGGATATAACACC
GCCAAACAACCCACTTCTTACGATTTCCACATATTGGAAACTCTTTTGGT
TCCCTCCCATCCCGCATCCTCCTTTTCTCTCCCCAGGGGCCTAACCTTTT
TTCACTAAATGCAACTCGCCAATAACCCCCCTTTCCTTAAACTAAATTCG
CCTCCATCTCAACTAACCCACTCACATCCGTGCCCCTCTCTCTCCTGTAT
GTTCATCAATCTACATGTTCTAACTACTACTCATACTCTCCGCGAGTGTC
GCATCCTCCTTGGCCGGCACCAGCTCCCTCTCATTGAATCATCCACAACT
ACTTATATCGCCTCACCACACACTTCCCGTTTCCTTCTACTTCCCCCTTC
AACGATAAACCTACGATTTCATTTACACTGACATTTTACCTTATTATTTC
TCAATGCTAGACCAACCCCCGCGCGCTCTTATCCCCCAACCTCTTCATCG
TACTCTTGATAAATCTCCCCCTATCACCTCTACCACTCATCACCCTCATG
CTCTACTCTATCTACAACTATCTCCAACTACCATCCCGCAGTCATTACTC
CCTCGCCTACCTTTCCTTCGACTCTCACATCT
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