DY260477

Overview
NameDY260477
Unique NameDY260477
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1214
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY260477_ssr1056 microsatellite DY260477_ssr1056:1056..1065. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig1553 contig Ccv1_Contig1553:1..1214. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY260477 vs. ExPASy Swiss-Prot
Match: DFRA_VITVI (Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.809e-48
Identity = 107/247 (43.32%), Postives = 154/247 (62.35%), Query Frame = 3
Query:   66 KVVCVTGASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTGHLLALDGASERLQLFKANLLEEGSYDSVVDGCDGVFHTASPFYHDVKDPQVELLDPAVKGTVNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVPINPAMVIGPLLQPTLNTSAAAVLSLIKGSPNLPQCDFREG--LNVKNVANAHIPAFEIPSGQ 791
            + VCVTGASG+I SWLV  LL R  TV+A+VRDP + KK  HLL L  A   L L+KA+L +EGS+D  + GC GVFH A+P   + KDP+ E++ P ++G + ++ SCA   +++R+V TSS   V    + + P  V DE+ +SD E C+  K+  W Y +SKTLAE AAWK+AKE +ID + I P +V+GP +  ++  S    LS I G+        R+G  +++ ++ NAHI  FE P  +
Sbjct:    6 ETVCVTGASGFIGSWLVMRLLERRLTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQ-EHQLP--VYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGN-EAHYSIIRQGQFVHLDDLCNAHIYLFENPKAE 248          
BLAST of DY260477 vs. ExPASy Swiss-Prot
Match: DFRA_MALDO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 6.875e-48
Identity = 102/244 (41.80%), Postives = 151/244 (61.89%), Query Frame = 3
Query:   72 VCVTGASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTGHLLALDGASERLQLFKANLLEEGSYDSVVDGCDGVFHTASPFYHDVKDPQVELLDPAVKGTVNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVPINPAMVIGPLLQPTLNTSAAAVLS-LIKGSPNLPQCDFREGLNVKNVANAHIPAFEIPSGQ 791
            VCVTGASG+I SWLV  LL  GYTV+A+VRDP + KK  HLL L  A   L L+KA+L +EGS+D  + GC GVFH A+P   + KDP+ E++ P + G +++L +C K  +++++V TSS   V      +    V DE+ +SD E C+  K+  W Y +SKTLAE AAWK+AKE +ID + I P +VIGP L P++  S    LS +++   +       + +++ ++  +HI  +E P  +
Sbjct:    8 VCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIQGCSGVFHVATPMDFESKDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTVNVEEHQKP---VYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIYLYEHPKAE 248          
BLAST of DY260477 vs. ExPASy Swiss-Prot
Match: DFRA_PYRCO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 3.412e-47
Identity = 98/209 (46.89%), Postives = 135/209 (64.59%), Query Frame = 3
Query:   72 VCVTGASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTGHLLALDGASERLQLFKANLLEEGSYDSVVDGCDGVFHTASPFYHDVKDPQVELLDPAVKGTVNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVPINPAMVIGPLLQPTLNTSAAAVLSLI 689
            VCVTGASG+I SWLV  LL  GYTV+A+VRDP + KK  HLL L  A   L L+KA+L +EGS+D  + GC GVFH A+P   + +DP+ E++ P + G +++L +C K  +++++V TSS   V      +    V DE+ +SD E C+  K+  W Y +SKTLAE AAWK+AKE +ID + I P +VIGP L P++  S    LS I
Sbjct:    8 VCVTGASGFIGSWLVMRLLEHGYTVRATVRDPTNQKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIQGCSGVFHVATPMDFESRDPENEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTVNVEEHQKP---VYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVIGPFLMPSMPPSLITGLSPI 213          
BLAST of DY260477 vs. ExPASy Swiss-Prot
Match: DFRA_CALCH (Dihydroflavonol-4-reductase OS=Callistephus chinensis GN=F PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 2.212e-46
Identity = 104/245 (42.45%), Postives = 151/245 (61.63%), Query Frame = 3
Query:   72 VCVTGASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTGHLLALDGASERLQLFKANLLEEGSYDSVVDGCDGVFHTASPFYHDVKDPQVELLDPAVKGTVNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVPINPAMVIGPLLQPTLNTSAAAVLSLIKGSPNLPQCDFREG--LNVKNVANAHIPAFEIPSGQ 791
            VCVTGA+G+I SWLV  LL RGY V+A+VR+P D KK  HLL L  A   L L+KA+L +EGS+D  ++GC GVFH A+P   + KDP+ E++ P ++G ++++ SCAK  ++K++V TSS   V       T   V DE+ +SD +     K+  W Y +SKTLAE AA + AKE +ID V I P +V+GP + PT   S    LSLI G+ +      ++G  +++ ++   HI  +E P  +
Sbjct:    9 VCVTGAAGFIGSWLVMRLLERGYIVRATVRNPGDMKKVKHLLELPKAETNLTLWKADLTQEGSFDEAIEGCHGVFHVATPMDFESKDPENEIIKPTIEGILSIIRSCAKAKTVKKLVYTSSAGTV---NVQETQLPVYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAMEAAKENNIDFVSIIPPLVVGPFINPTFPPSLITALSLINGAES-HYSIIKQGQYVHLDDLCECHIFLYENPEAK 249          
BLAST of DY260477 vs. ExPASy Swiss-Prot
Match: DFRA_ARATH (Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=2 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 2.212e-46
Identity = 105/242 (43.39%), Postives = 146/242 (60.33%), Query Frame = 3
Query:   66 KVVCVTGASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTGHLLALDGASERLQLFKANLLEEGSYDSVVDGCDGVFHTASPFYHDVKDPQVELLDPAVKGTVNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVPINPAMVIGPLLQPTLNTSAAAVLSLIKGSPNLPQCDFREG--LNVKNVANAHIPAFE 776
            + VCVTGASG+I SWLV  LL RGY V+A+VRDP + KK  HLL L  A   L L+KA+L EEGSYD  ++GCDGVFH A+P   + KDP+ E++ P V G + ++ +C K  +++R V TSS   V      +    V DE  +SD E     K+  W Y +SKTLAE AAW FA+EK +D + I P +V+GP +  ++  S    LS I  +        R+G  +++ ++ NAHI  +E
Sbjct:    6 ETVCVTGASGFIGSWLVMRLLERGYFVRATVRDPGNLKKVQHLLDLPNAKTLLTLWKADLSEEGSYDDAINGCDGVFHVATPMDFESKDPENEVIKPTVNGMLGIMKACVKAKTVRRFVFTSSAGTVNVEEHQKN---VYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAWDFAEEKGLDFISIIPTLVVGPFITTSMPPSLITALSPITRN-EAHYSIIRQGQYVHLDDLCNAHIFLYE 243          
BLAST of DY260477 vs. ExPASy Swiss-Prot
Match: DFRA_DIACA (Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 4.927e-46
Identity = 99/212 (46.70%), Postives = 136/212 (64.15%), Query Frame = 3
Query:   63 GKVVCVTGASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTGHLLALDGASERLQLFKANLLEEGSYDSVVDGCDGVFHTASPFYHDVKDPQVELLDPAVKGTVNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVPINPAMVIGPLLQPTLNTSAAAVLSLI 689
            G+ VCVTGASG+I SWL+  LL RGYTV+A+VRDP++ KK  HLL L  A   L L+KA+L EEGS+D+ VDGC GVFH A+P   + KDP+ E++ P + G +++L SC K   ++RVV TSS   V       T   V DET +S  +  +  K+  W Y +SK LAE AAWK+A E +++ + I P +V+GP + P++  S    LS I
Sbjct:   22 GETVCVTGASGFIGSWLIMRLLERGYTVRATVRDPDNTKKVQHLLDLPNAKTNLTLWKADLHEEGSFDAAVDGCTGVFHIATPMDFESKDPENEMIKPTINGMLDILKSCVK-AKLRRVVFTSSGGTVNVEA---TQKPVYDETCWSALDFIRSVKMTGWMYFVSKILAEQAAWKYAAENNLEFISIIPPLVVGPFIMPSMPPSLITALSPI 229          
BLAST of DY260477 vs. ExPASy Swiss-Prot
Match: DFRA_PETHY (Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 1.434e-45
Identity = 103/242 (42.56%), Postives = 148/242 (61.16%), Query Frame = 3
Query:   72 VCVTGASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTGHLLALDGASERLQLFKANLLEEGSYDSVVDGCDGVFHTASPFYHDVKDPQVELLDPAVKGTVNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVPINPAMVIGPLLQPTLNTSAAAVLSLIKGSPNLPQCDFREG--LNVKNVANAHIPAFEIP 782
            VCVTGA+G+I SWLV  LL RGY V A+VRDP + KK  HLL L  A   L L+KA+L  EGS+D  + GC GVFH A+P   + KDP+ E++ P V+G ++++ SCAK  ++KR+V TSS   +    + +   +  D+T +SD +     K+  W Y  SK LAE AA + AK+K+ID + I P +V+GP + PT   S    LSLI G+     C  ++G  +++ ++  AHI  +E P
Sbjct:   18 VCVTGAAGFIGSWLVMRLLERGYNVHATVRDPENKKKVKHLLELPKADTNLTLWKADLTVEGSFDEAIQGCQGVFHVATPMDFESKDPENEVIKPTVRGMLSIIESCAKANTVKRLVFTSSAGTLDVQEQQK---LFYDQTSWSDLDFIYAKKMTGWMYFASKILAEKAAMEEAKKKNIDFISIIPPLVVGPFITPTFPPSLITALSLITGN-EAHYCIIKQGQYVHLDDLCEAHIFLYEHP 255          
BLAST of DY260477 vs. ExPASy Swiss-Prot
Match: DFRA_GERHY (Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 9.292e-45
Identity = 101/245 (41.22%), Postives = 147/245 (60.00%), Query Frame = 3
Query:   72 VCVTGASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTGHLLALDGASERLQLFKANLLEEGSYDSVVDGCDGVFHTASPFYHDVKDPQVELLDPAVKGTVNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVPINPAMVIGPLLQPTLNTSAAAVLSLIKGSPNLPQCDFREG--LNVKNVANAHIPAFEIPSGQ 791
            VCVTGA+G+I SWLV  LL RGY V A+VRDP D KK  HLL L  A   L+L+KA+L +EGS+D  + GC GVFH A+P   + KDP+ E++ P ++G ++++ SC K  ++K++V TSS   V  NG+ +    V DE+ +SD +     K+  W Y +SKTLAE AAW   K  +I  + I P +V+GP +  T   S    LSLI G+        ++G  +++ ++   HI  +E P  +
Sbjct:    9 VCVTGAAGFIGSWLVMRLLERGYVVHATVRDPGDLKKVKHLLELPKAQTNLKLWKADLTQEGSFDEAIQGCHGVFHLATPMDFESKDPENEIIKPTIEGVLSIIRSCVKAKTVKKLVFTSSAGTV--NGQEKQLH-VYDESHWSDLDFIYSKKMTAWMYFVSKTLAEKAAWDATKGNNISFISIIPTLVVGPFITSTFPPSLVTALSLITGN-EAHYSIIKQGQYVHLDDLCECHIYLYENPKAK 249          
BLAST of DY260477 vs. ExPASy Swiss-Prot
Match: DFRA_MAIZE (Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 1.342e-43
Identity = 101/251 (40.24%), Postives = 156/251 (62.15%), Query Frame = 3
Query:   48 GAAAAGK-VVCVTGASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTGHLLALDGASERLQLFKANLLEEGSYDSVVDGCDGVFHTASPFYHDVKDPQVELLDPAVKGTVNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVPINPAMVIGPLLQPTLNTSAAAVLSLIKG-SPNLPQCDFREGLNVKNVANAHIPAFEIPS 785
            GA A+ K  V VTGASG++ SWLV  LL  GYTV+A+VRDP +  KT  L+ L GA+ERL ++KA+L EEGS+   + GC GVFH A+P     KDP+ E++ P V+G ++++ +C +  +++R+V TSS   V    + R    V DE  ++D + C++ K+  W Y +SKTLAE AA  +A E  +D+V I P +V+GP +  ++  S    L+LI G +P+       + +++ ++ +A I  FE P+
Sbjct:    4 GAGASEKGTVLVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVGKTKPLMDLPGATERLSIWKADLAEEGSFHDAIRGCTGVFHVATPMDFLSKDPENEVIKPTVEGMISIMRACKEAGTVRRIVFTSSAGTVNLEERQRP---VYDEESWTDVDFCRRVKMTGWMYFVSKTLAEKAALAYAAEHGLDLVTIIPTLVVGPFISASMPPSLITALALITGNAPHYSILKQVQLIHLDDLCDAEIFLFENPA 251          
BLAST of DY260477 vs. ExPASy Swiss-Prot
Match: DFRA_HORVU (Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 2.289e-43
Identity = 91/212 (42.92%), Postives = 137/212 (64.62%), Query Frame = 3
Query:   72 VCVTGASGYIASWLVKLLLSRGYTVKASVRDPNDPKKTGHLLALDGASERLQLFKANLLEEGSYDSVVDGCDGVFHTASPFYHDVKDPQVELLDPAVKGTVNVLNSCAKFPSIKRVVLTSSMAAVAYNGKPRTPDVVVDETWFSDPEVCKQSKL--W-YVLSKTLAEDAAWKFAKEKSIDMVPINPAMVIGPLLQPTLNTSAAAVLSLIKGS 698
            V VTGASG++ SWLV  LL  GYTV+A+VRDP + +KT  LL L GA ERL ++KA+L E+GS++  + GC GVFH A+P   D +DP+ E++ P V+G ++++ +C +  ++KR+V TSS  +V    +PR      D+  +SD + C++ K+  W Y +SK LAE AA ++A E  +D + I P +V+GP L   +  S    L+LI G+
Sbjct:    8 VVVTGASGFVGSWLVMKLLQAGYTVRATVRDPANVEKTKPLLELPGAKERLSIWKADLSEDGSFNEAIAGCTGVFHVATPMDFDSQDPENEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEERPRP---AYDQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAMEYASENGLDFISIIPTLVVGPFLSAGMPPSLVTALALITGN 216          
The following BLAST results are available for this feature:
BLAST of DY260477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
DFRA_VITVI1.809e-4843.32Dihydroflavonol-4-reductase OS=Vitis vinifera GN=D... [more]
DFRA_MALDO6.875e-4841.80Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_PYRCO3.412e-4746.89Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_CALCH2.212e-4642.45Dihydroflavonol-4-reductase OS=Callistephus chinen... [more]
DFRA_ARATH2.212e-4643.39Dihydroflavonol-4-reductase OS=Arabidopsis thalian... [more]
DFRA_DIACA4.927e-4646.70Dihydroflavonol-4-reductase OS=Dianthus caryophyll... [more]
DFRA_PETHY1.434e-4542.56Dihydroflavonol-4-reductase OS=Petunia hybrida GN=... [more]
DFRA_GERHY9.292e-4541.22Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=... [more]
DFRA_MAIZE1.342e-4340.24Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3... [more]
DFRA_HORVU2.289e-4342.92Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP12YJ18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY260477 ID=DY260477; Name=DY260477; organism=Citrus clementina; type=EST; length=1214bp
CACTCCGAGACGTTATTATTACGAAGAATCAGTAGCTAAAAATGAGCGGT
GCAGCAGCAGCCGGGAAGGTCGTGTGCGTGACCGGAGCATCTGGTTACAT
AGCATCATGGCTTGTCAAGCTTCTTCTTTCTCGTGGCTATACTGTCAAGG
CCTCTGTTCGTGATCCCAATGATCCAAAAAAGACGGGACACTTACTTGCA
CTTGATGGAGCTTCGGAAAGACTTCAGTTGTTTAAGGCAAACCTTTTGGA
AGAAGGATCTTATGATTCAGTTGTTGATGGGTGCGATGGTGTTTTCCATA
CTGCATCCCCTTTTTATCATGATGTCAAGGATCCGCAGGTGGAGTTACTT
GATCCTGCAGTGAAAGGAACTGTTAATGTTCTTAACTCATGTGCAAAGTT
CCCTTCTATCAAACGAGTGGTTTTAACATCTTCAATGGCTGCAGTTGCAT
ACAACGGAAAACCTCGAACCCCTGATGTGGTAGTTGATGAGACTTGGTTC
TCGGATCCAGAGGTTTGCAAGCAATCAAAGCTTTGGTATGTGCTTTCAAA
GACATTGGCTGAGGATGCGGCTTGGAAATTTGCAAAGGAGAAGAGTATTG
ACATGGTCCCCATTAACCCAGCAATGGTTATCGGTCCTCTCTTACAGCCA
ACCCTTAATACAAGTGCTGCTGCTGTTCTAAGCTTAATTAAAGGAAGCCC
AAACTTACCCCAATGCGACTTTAGGGAGGGGTTAAACGTTAAAAATGTTG
CTAATGCCCATATTCCAGCATTTGAAATTCCCTCCGGCCAGTGGACAAAA
TTGTTTTAGTTGAAAAAATTTTTACCCTATTTCAAACCTCCGGGAACCCC
GTAACCCAACTTTACCCCTACTTTTTAACTTTCCCAAAAAATTGGCGGAA
CAAAAAACCCCTATGTTCCCATCAATTTCGGTTTTTAAAGGAAAAAACCC
CAAAAAATTTGGGTTTTTGGATTTCTCCCCCATTATAAAGCGGCACCCTC
CCGGGAAAACCCTTTTAATTTCCTAAAAGGAAAAAGGTGTTTTTGTAATT
TCTTTGCGCGCGCGCGGGCTTCCCCTCTTTCCCTCCCCCCCCCACTCTAT
ATTCCATACAAAAAACCCGCCGCTCACGAAACACTAGGGTCTTTCTTCTG
CGGTGCGTCGACCACAAGTATACTCTTTATTCTTTGTCATCATTCACTCC
TCCACAATGTTCCT
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