DY262455
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY262455 vs. ExPASy Swiss-Prot
Match: VPS91_SCHPO (Vacuolar protein sorting-associated protein 9a OS=Schizosaccharomyces pombe GN=vps901 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.927e-22 Identity = 52/200 (26.00%), Postives = 104/200 (52.00%), Query Frame = 3 Query: 102 FYDFLDRMRNPASLDLVRSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKYVMTKLFSRTF------------ASTSEDVKIDQEISEKICLLQTFLRPEHLDIPTFLQNEASWLLAEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIK 665 F+ FL+++R+ ++ + + +KSF+ F+ K +++F + I+ + WA+ + I++A EG+EK V+ +L++ F + S+DV+ D+ +SEK+ L Q ++ E+LDI + + LA EL++IN APR+K+ + + V+ AD F+P+LI+++++ Sbjct: 115 FHMFLEQLRSSSAEPVAKYLKSFLSEFTKRRWTVNYQVKLIRDFLKFINEKIEQYEPWASGSQAEIDNAKEGMEKLVLNRLYTSLFSPEIAKSGIPLSSEHSDDVEEDRVLSEKMELFQ-WITEENLDIKKQKSSSKFFKLAADELRRINDYHAPRDKI-----ICLLNCCKVIFSYLRNVVKEESADMFVPILIFVVLQ 308 HSP 2 Score: 46.9802 bits (110), Expect = 6.927e-22 Identity = 23/62 (37.10%), Postives = 35/62 (56.45%), Query Frame = 1 Query: 712 VHANPPQLHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFILDLNAKSLSMEETEFEKSMQ 897 + A P L SNI++IQ +R L E YY + L+ A +FI L+ SL++ E EF ++ Sbjct: 307 LQARPAHLVSNIQYIQRFRSPEKLTGEVMYYLSTLMGAMSFIETLDCSSLTITEEEFNAQIE 368
BLAST of DY262455 vs. ExPASy Swiss-Prot
Match: VPS9_YEAST (Vacuolar protein sorting-associated protein 9 OS=Saccharomyces cerevisiae GN=VPS9 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.551e-17 Identity = 62/214 (28.97%), Postives = 99/214 (46.26%), Query Frame = 3 Query: 102 FYDF---LDRMRNPASLDLVRSIKSFIVSFSFNNA--NPENDGKRVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKYVMTKLFSRTFAST-------------SEDVKIDQEISEKICLLQTFLRPEHLDIPTFLQN---EASWLLAEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIKLQDQF 680 FYDF + +++ P + LV+ KSF+ +F + K + +F T + + + + + +A EG+EK +M KL+SR F+ + +D+ D + EKI + F+ P LDIP + N LA KEL KIN K+PR+K+ + +N GAD F+PVLIY I+K Q ++ Sbjct: 60 FYDFQIFIKQLQTPGADPLVKYTKSFLRNFLAQRLLWTVSEEIKLISDFKTFIYDKFTLYEPFRSLDNSKMRNAKEGMEKLIMGKLYSRCFSPSLYEILQKPLDDEHMKDLTNDDTLLEKIRHYR-FISPIMLDIPDTMPNARLNKFVHLASKELGKINRFKSPRDKMVCVLNASKVIFGLLKHTKLEQN----GADSFIPVLIYCILKGQVRY 268 HSP 2 Score: 38.1206 bits (87), Expect = 2.551e-17 Identity = 19/56 (33.93%), Postives = 35/56 (62.50%), Query Frame = 1 Query: 733 LHSNIKFIQLYRRQAMLVSEAAYYFTNLVSAKTFILDLNAKSLSMEETE-FEKSMQ 897 L SN+ +I+ +R + E YY ++L +A FI+ L +SL++++ E FE++ Q Sbjct: 269 LVSNVNYIERFRSPDFIRGEEEYYLSSLQAALNFIMSLTERSLTIDDHEDFEEAYQ 324
BLAST of DY262455 vs. ExPASy Swiss-Prot
Match: RABX5_BOVIN (Rab5 GDP/GTP exchange factor OS=Bos taurus GN=RABGEF1 PE=1 SV=1) HSP 1 Score: 53.1434 bits (126), Expect = 7.698e-16 Identity = 48/193 (24.87%), Postives = 93/193 (48.19%), Query Frame = 3 Query: 102 FYDFLDRMRNPASLDLVRSIKSFIVSFSFN-NANPENDGKRVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKYVMTKLFSRTFA-STSEDVKIDQEISEKICLLQTFLRPEHLDIPTFLQ-NEASWLL--AEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIK 665 F +FL ++ + K F+ + + + + E + Q+F+ + ++ E +E M+ +EKY+MT+L+ F T++D K D I ++I L ++ P+ L +P + E S ++ A ++ ++++ + PR+K+ I++N E ADDFLP LIYI++K Sbjct: 143 FIEFLKTFHKTGQ-EIYKQTKLFLEAMHYKRDLSIEEQSECTQDFYQNVAERMQTR---GKVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALH-WVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKL---ACITKCSKHIFNAIKITKN-EPASADDFLPTLIYIVLK 326 HSP 2 Score: 52.7582 bits (125), Expect = 7.698e-16 Identity = 27/67 (40.30%), Postives = 42/67 (62.69%), Query Frame = 1 Query: 721 NPPQLHSNIKFIQLYRRQAMLVS-EAAYYFTNLVSAKTFILDLNAKSLSMEETEFEKSMQAARLPTK 918 NPP+L SNI++I + + L++ E YYFTNL A FI L+A+SL++ + +F++ M P K Sbjct: 328 NPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPRK 394
BLAST of DY262455 vs. ExPASy Swiss-Prot
Match: RABX5_MOUSE (Rab5 GDP/GTP exchange factor OS=Mus musculus GN=Rabgef1 PE=2 SV=1) HSP 1 Score: 52.7582 bits (125), Expect = 1.300e-15 Identity = 27/67 (40.30%), Postives = 42/67 (62.69%), Query Frame = 1 Query: 721 NPPQLHSNIKFIQLYRRQAMLVS-EAAYYFTNLVSAKTFILDLNAKSLSMEETEFEKSMQAARLPTK 918 NPP+L SNI++I + + L++ E YYFTNL A FI L+A+SL++ + +F++ M P K Sbjct: 327 NPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPRK 393 HSP 2 Score: 52.373 bits (124), Expect = 1.300e-15 Identity = 47/193 (24.35%), Postives = 93/193 (48.19%), Query Frame = 3 Query: 102 FYDFLDRMRNPASLDLVRSIKSFIVSFSFN-NANPENDGKRVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKYVMTKLFSRTFA-STSEDVKIDQEISEKICLLQTFLRPEHLDIPTFLQ-NEASWLLAEK--ELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIK 665 F DFL ++ + K F+ + + + + E + Q+F+ + ++ E +E M+ +EK++MT+L+ F T++D K D I ++I L ++ P+ L +P + E S ++ + ++ ++++ + PR+K+ I++N E ADDFLP LIYI++K Sbjct: 142 FIDFLKTFHKTGQ-EVYKQTKMFLEAMPYKRDLSIEEQSECTQDFYQNVAERMQTR---GKVPPEKVEKIMDQIEKHIMTRLYKFVFCPETTDDEKKDLAIQKRIRALH-WVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITRCSKHIFNAI---KITKN-EPASADDFLPTLIYIVLK 325
BLAST of DY262455 vs. ExPASy Swiss-Prot
Match: RABX5_HUMAN (Rab5 GDP/GTP exchange factor OS=Homo sapiens GN=RABGEF1 PE=1 SV=2) HSP 1 Score: 52.7582 bits (125), Expect = 2.829e-15 Identity = 27/67 (40.30%), Postives = 42/67 (62.69%), Query Frame = 1 Query: 721 NPPQLHSNIKFIQLYRRQAMLVS-EAAYYFTNLVSAKTFILDLNAKSLSMEETEFEKSMQAARLPTK 918 NPP+L SNI++I + + L++ E YYFTNL A FI L+A+SL++ + +F++ M P K Sbjct: 544 NPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPRK 610 HSP 2 Score: 51.2174 bits (121), Expect = 2.829e-15 Identity = 38/129 (29.46%), Postives = 68/129 (52.71%), Query Frame = 3 Query: 291 EAIESAMEGLEKYVMTKLFSRTFA-STSEDVKIDQEISEKICLLQTFLRPEHLDIPT---FLQNEASWLLAEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIK 665 E +E M+ +EKY+MT+L+ F T++D K D I ++I L+ ++ P+ L +P + + A ++ ++++ + PR+K+ I++N E ADDFLP LIYI++K Sbjct: 419 ERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALR-WVTPQMLCVPVNEDIPEVSDMVVKAITDIIEMDSKRVPRDKL---ACITKCSKHIFNAIKITKN-EPASADDFLPTLIYIVLK 542
BLAST of DY262455 vs. ExPASy Swiss-Prot
Match: GAPD1_XENLA (GTPase-activating protein and VPS9 domain-containing protein 1 OS=Xenopus laevis GN=gapvd1 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.235e-13 Identity = 51/172 (29.65%), Postives = 83/172 (48.26%), Query Frame = 3 Query: 159 IKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKYVMTKLFSRTFASTSE-DVKIDQEISEKICLLQTFLRPEH--LDIPTFLQNEASWLLAEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIK 665 I FI F A + + V+EF ++ A+ +W NA+ E ++ A +E+ +M ++F F + D+ DQ + E I L + H L IP EA W A+ E++ I+A K PR+KV S++ + GADDF+PVL++++IK Sbjct: 1239 IHEFIQDFQKLTAADDKTAQ-VEEFLQSLYGAMAQDVIWQNASEEQLQDAQIAIERSIMNRIFKLAFNPNQDADILRDQVLHEHIKRLSKVVTANHRALQIPEVYLREAPWPSAQTEIRTISAYKTPRDKV---QCILRMCSTIMNLLSLANEYSVPGADDFVPVLVFVLIK 1406
BLAST of DY262455 vs. ExPASy Swiss-Prot
Match: GAPD1_HUMAN (GTPase-activating protein and VPS9 domain-containing protein 1 OS=Homo sapiens GN=GAPVD1 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.613e-13 Identity = 51/174 (29.31%), Postives = 84/174 (48.28%), Query Frame = 3 Query: 153 RSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKYVMTKLFSRTFASTSE-DVKIDQEISEKICLLQTFLRPEH--LDIPTFLQNEASWLLAEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIK 665 + I+ FI F A + + V++F + A+ +W NA+ E ++ A +E+ VM ++F F + D+ DQ + E I L + H L IP EA W A+ E++ I+A K PR+KV S++ + GADDF+PVL++++IK Sbjct: 1263 KKIREFIQDFQKLTAADDKTAQ-VEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKV---QCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIK 1432
BLAST of DY262455 vs. ExPASy Swiss-Prot
Match: GAPD1_BOVIN (GTPase-activating protein and VPS9 domain-containing protein 1 OS=Bos taurus GN=GAPVD1 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.613e-13 Identity = 51/174 (29.31%), Postives = 84/174 (48.28%), Query Frame = 3 Query: 153 RSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKYVMTKLFSRTFASTSE-DVKIDQEISEKICLLQTFLRPEH--LDIPTFLQNEASWLLAEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIK 665 + I+ FI F A + + V++F + A+ +W NA+ E ++ A +E+ VM ++F F + D+ DQ + E I L + H L IP EA W A+ E++ I+A K PR+KV S++ + GADDF+PVL++++IK Sbjct: 1198 KKIREFIQDFQKLTAADDKTAQ-VEDFLQFLYGAMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLKEAPWPSAQSEIRTISAYKTPRDKV---QCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIK 1367
BLAST of DY262455 vs. ExPASy Swiss-Prot
Match: GAPD1_MOUSE (GTPase-activating protein and VPS9 domain-containing protein 1 OS=Mus musculus GN=Gapvd1 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 4.692e-13 Identity = 50/174 (28.74%), Postives = 83/174 (47.70%), Query Frame = 3 Query: 153 RSIKSFIVSFSFNNANPENDGKRVQEFFTTMESAIKDHPLWANATIEAIESAMEGLEKYVMTKLFSRTFASTSE-DVKIDQEISEKICLLQTFLRPEH--LDIPTFLQNEASWLLAEKELQKINALKAPREKVXXXXXXXXXXXXXXXXASISENVELGGADDFLPVLIYIIIK 665 + I+ FI F A + + V++F + + +W NA+ E ++ A +E+ VM ++F F + D+ DQ + E I L + H L IP EA W A+ E++ I+A K PR+KV S++ + GADDF+PVL++++IK Sbjct: 1243 KKIREFIQDFQKLTAADDKTAQ-VEDFLQFLYGVMAQDVIWQNASEEQLQDAQLAIERSVMNRIFKLAFYPNQDGDILRDQVLHEHIQRLSKVVTANHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKV---QCILRMCSTIMNLLSLANEDSVPGADDFVPVLVFVLIK 1412 The following BLAST results are available for this feature:
BLAST of DY262455 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262455 ID=DY262455; Name=DY262455; organism=Citrus clementina; type=EST; length=1321bpback to top |