DY262548

Overview
NameDY262548
Unique NameDY262548
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1345
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY262548_ssr75 microsatellite DY262548_ssr75:75..89. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of DY262548 vs. ExPASy Swiss-Prot
Match: PEL12_ARATH (Probable pectate lyase 12 OS=Arabidopsis thaliana GN=At3g53190 PE=2 SV=2)

HSP 1 Score: 350.903 bits (899), Expect = 1.709e-96
Identity = 175/265 (66.04%), Postives = 191/265 (72.08%), Query Frame = 3
Query:  213 SALNLTLPH-QHPDPDAVAQDVQRRVNVSLSRRQALAINAQ-----CQTGNPIDDCWHCDPNWAANRQRLADCSIGFAQGTLGGKGGQIYVITDSSDKDPANPTPGTLRHAVIQTEPLWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYXXXXXXXXXXXXXCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNN*FSHHNEVMLLGHHEQYALDMGDAVTL 989
            S LN TL    HPDP+ VA  VQ +VN S++RRQAL    Q     C TGNPIDDCW CDPNW  NRQ LADC IGF Q  LGGKGGQ Y +TDSSD D  NP PGTLR+ VIQ EPLWI F SNM+IKLK ELI NSYKT+DGRGANV I G GC+TLQY             C  SGNT + SSPTH G+R KSDGDGISIFGS+ IW+DHCSLS C DGLIDA+MGSTGITISNN FSHHNEVMLLGH + Y  D G  VT+
Sbjct:   24 SMLNRTLLLIPHPDPELVAYQVQWKVNASITRRQALDTTDQAGSTPCITGNPIDDCWKCDPNWPNNRQGLADCGIGFGQYALGGKGGQFYFVTDSSDDDAVNPKPGTLRYGVIQEEPLWIVFPSNMMIKLKQELIFNSYKTLDGRGANVHIVGGGCITLQYVSNIIIHNIHIHHCYQSGNTNVRSSPTHYGFRTKSDGDGISIFGSKDIWIDHCSLSRCKDGLIDAVMGSTGITISNNFFSHHNEVMLLGHSDHYEPDSGMQVTI 288          

HSP 2 Score: 25.0238 bits (53), Expect = 1.709e-96
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  986 IALNHFGVALVQRM 1027
            IA NHFG  L+QRM
Sbjct:  288 IAFNHFGEKLIQRM 301          
BLAST of DY262548 vs. ExPASy Swiss-Prot
Match: PEL13_ARATH (Probable pectate lyase 13 OS=Arabidopsis thaliana GN=PMR6 PE=1 SV=1)

HSP 1 Score: 348.977 bits (894), Expect = 3.793e-96
Identity = 174/269 (64.68%), Postives = 199/269 (73.98%), Query Frame = 3
Query:  219 LNLTLPHQHPDPDAVAQDVQRRVNVSLSRRQ-----------ALAINAQCQTGNPIDDCWHC-DPNWAANRQRLADCSIGFAQGTLGGKGGQIYVITDSSDKDPANPTPGTLRHAVIQTEPLWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYXXXXXXXXXXXXXCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNN*FSHHNEVMLLGHHEQYALDMGDAVTL 989
            LNLTLPHQHP PD+VA  V R VN SL+RRQ           + + ++ C+TGNPIDDCW C D +W+ NRQRLADCSIGF  GTLGGK G+IYV+TDSSD +P NPTPGTLR+ VIQ EPLWI F+SNMLI+LK ELIINSYKT+DGRG+ V ITGNGCLTLQY             CKPS              RG+SDGDGISIFGSQKIWVDHCS+S+CTDGLIDA+MGST ITISNN F+HH+EVMLLGH + YA D G  VT+
Sbjct:   26 LNLTLPHQHPSPDSVALHVIRSVNESLARRQLSSPSSSSSSSSSSSSSSCRTGNPIDDCWRCSDADWSTNRQRLADCSIGFGHGTLGGKNGKIYVVTDSSDNNPTNPTPGTLRYGVIQEEPLWIVFSSNMLIRLKQELIINSYKTLDGRGSAVHITGNGCLTLQYVQHIIIHNLHIYDCKPSAG---------FEKRGRSDGDGISIFGSQKIWVDHCSMSHCTDGLIDAVMGSTAITISNNYFTHHDEVMLLGHDDNYAPDTGMQVTI 285          

HSP 2 Score: 25.7942 bits (55), Expect = 3.793e-96
Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  986 IALNHFGVALVQRM 1027
            IA NHFG  LVQRM
Sbjct:  285 IAFNHFGQGLVQRM 298          
BLAST of DY262548 vs. ExPASy Swiss-Prot
Match: PEL5_ARATH (Probable pectate lyase 5 OS=Arabidopsis thaliana GN=At1g67750 PE=2 SV=2)

HSP 1 Score: 308.145 bits (788), Expect = 6.555e-84
Identity = 146/247 (59.11%), Postives = 174/247 (70.45%), Query Frame = 3
Query:  249 DPDAVAQDVQRRVNVSLSRRQALAINAQCQTGNPIDDCWHCDPNWAANRQRLADCSIGFAQGTLGGKGGQIYVITDSSDKDPANPTPGTLRHAVIQTEPLWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYXXXXXXXXXXXXXCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNN*FSHHNEVMLLGHHEQYALDMGDAVTL 989
            +P+ V Q+V  ++N S   R+ L +   C TGNPIDDCW CDP W  NRQRLADC+IGF +  +GG+ G+IYV+TDSSDKD  NP PGTLRHAVIQ EPLWI FA +M+IKLK ELI+NS+KTIDGRGA+V I G  C+T+QY             CK  GN  +  SP+H G+R  SDGD +SIFG   +WVDHCSLS C DGLIDAI GST ITISNN  SHHN+VMLLGH + Y  D    VT+
Sbjct:   32 EPELVVQEVNEKINAS---RRNLGV-LSCGTGNPIDDCWRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHDCKRKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAITISNNYLSHHNKVMLLGHSDSYTRDKNMQVTI 274          

HSP 2 Score: 25.7942 bits (55), Expect = 6.555e-84
Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  986 IALNHFGVALVQRM 1027
            IA NHFG  LVQRM
Sbjct:  274 IAFNHFGEGLVQRM 287          
BLAST of DY262548 vs. ExPASy Swiss-Prot
Match: PEL18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2)

HSP 1 Score: 306.605 bits (784), Expect = 1.898e-83
Identity = 139/248 (56.05%), Postives = 179/248 (72.18%), Query Frame = 3
Query:  246 PDPDAVAQDVQRRVNVSLSRRQALAINAQCQTGNPIDDCWHCDPNWAANRQRLADCSIGFAQGTLGGKGGQIYVITDSSDKDPANPTPGTLRHAVIQTEPLWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYXXXXXXXXXXXXXCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNN*FSHHNEVMLLGHHEQYALDMGDAVTL 989
            PDP++V ++V + +N S++ R+ L     C TGNPIDDCW CDP+W  +RQRLADC+IGF +  +GG+ G+IYV+TDS + +P +P PGTLRHAV+Q EPLWI F  +M I+LK ELI+NS+KTIDGRGA+V I+G  C+T+QY             CK  GN M+ SSP H G+R  SDGDG+SIFG   +WVDHCS S C DGLIDAIMGST IT+SNN  +HH++VMLLGH + Y+ D    VT+
Sbjct:   28 PDPESVVEEVHKSINASVAGRRKLGY-LSCTTGNPIDDCWRCDPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGGNAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNHMTHHDKVMLLGHSDTYSRDKNMQVTI 274          

HSP 2 Score: 25.7942 bits (55), Expect = 1.898e-83
Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  986 IALNHFGVALVQRM 1027
            IA NHFG  LVQRM
Sbjct:  274 IAFNHFGEGLVQRM 287          
BLAST of DY262548 vs. ExPASy Swiss-Prot
Match: PEL22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 1.219e-82
Identity = 145/259 (55.98%), Postives = 180/259 (69.50%), Query Frame = 3
Query:  213 SALNLTLPHQHPDPDAVAQDVQRRVNVSLSRRQALAINAQCQTGNPIDDCWHCDPNWAANRQRLADCSIGFAQGTLGGKGGQIYVITDSSDKDPANPTPGTLRHAVIQTEPLWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYXXXXXXXXXXXXXCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNN*FSHHNEVMLLGHHEQYALDMGDAVTL 989
            SAL  +LP    DP+ V ++V R++N S+SRR+    +  C +GNPIDDCW CD +W  NR+RLADC IGF +  +GG+ G+IYV+TD  + DP NP PGTLR+AVIQ EPLWI F  +M I+LK ELI+NS+KT+DGRGA+V I+G  C+T+QY             CK  GNT +  SP H GYR  SDGDG+SIFG   +WVDHCSLS C DGLIDAI GST ITISNN  +HHN+VMLLGH + Y  D    VT+
Sbjct:   42 SALASSLPVS--DPELVVEEVHRKINESISRRKLGFFS--CGSGNPIDDCWRCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQDEPLWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDCKQGGNTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITISNNYLTHHNKVMLLGHSDTYEQDKNMQVTI 296          

HSP 2 Score: 25.7942 bits (55), Expect = 1.219e-82
Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  986 IALNHFGVALVQRM 1027
            IA NHFG  LVQRM
Sbjct:  296 IAFNHFGEGLVQRM 309          
BLAST of DY262548 vs. ExPASy Swiss-Prot
Match: PEL1_ARATH (Probable pectate lyase 1 OS=Arabidopsis thaliana GN=At1g04680 PE=2 SV=2)

HSP 1 Score: 299.671 bits (766), Expect = 7.830e-82
Identity = 141/254 (55.51%), Postives = 174/254 (68.50%), Query Frame = 3
Query:  237 HQHPDPDAVAQDVQRRVNVSL---SRRQALAINAQCQTGNPIDDCWHCDPNWAANRQRLADCSIGFAQGTLGGKGGQIYVITDSSDKDPANPTPGTLRHAVIQTEPLWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYXXXXXXXXXXXXXCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNN*FSHHNEVMLLGHHEQYALDMGDAVTL 989
            H   +PD VA +V     +S+   + R+ L     C TGNPIDDCW CDPNW  NR+RLADC IGF +  +GG+ G+ YV+TD  D +P NP PGTLRHAVIQ  PLWI F  +M+I+LK ELI+NS+KTIDGRGANV I   GC+T+Q+             CKP+GN M+ SS TH G+R  +DGD ISIFGS  +W+DH SLS+C DGL+DA+MGST ITISNN  +HHNEVMLLGH + Y  D    VT+
Sbjct:   43 HAVTNPDEVADEVLALTEMSVRNHTERRKLGYFT-CGTGNPIDDCWRCDPNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDNPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIVHGLHIHDCKPTGNAMVRSSETHFGWRTMADGDAISIFGSSHVWIDHNSLSHCADGLVDAVMGSTAITISNNHLTHHNEVMLLGHSDSYMRDKAMQVTI 295          

HSP 2 Score: 27.335 bits (59), Expect = 7.830e-82
Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 2
Query:  986 IALNHFGVALVQRM 1027
            IA NHFGV L+QRM
Sbjct:  295 IAYNHFGVGLIQRM 308          
BLAST of DY262548 vs. ExPASy Swiss-Prot
Match: PEL15_ARATH (Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 8.552e-81
Identity = 138/249 (55.42%), Postives = 173/249 (69.48%), Query Frame = 3
Query:  249 DPDAVAQDVQRRVNVSLSRRQALAINA--QCQTGNPIDDCWHCDPNWAANRQRLADCSIGFAQGTLGGKGGQIYVITDSSDKDPANPTPGTLRHAVIQTEPLWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYXXXXXXXXXXXXXCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNN*FSHHNEVMLLGHHEQYALDMGDAVTL 989
            DPD VA +V + V +S   R A        C TGNPIDDCW CD NW  NR+RLADC IGF +  +GG+ G+ Y++TD +D+D  NP PGTLRHAVIQ EPLWI F  +M+I+LK ELI+NS+KTID RG+NV I    C+T+Q+             CKP+GN M+ SSP+H G+R  +DGD +SIFGS  IW+DH SLS+C DGL+DA+MGST IT+SNN F+HHNEVMLLGH + Y  D    VT+
Sbjct:   88 DPDMVADEVAKLVQMSEQNRTARRKLGFFSCGTGNPIDDCWRCDRNWHKNRKRLADCGIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTLRHAVIQEEPLWIVFKRDMVIELKQELIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHFGWRTMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSDSYTKDKLMQVTI 336          

HSP 2 Score: 25.409 bits (54), Expect = 8.552e-81
Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  986 IALNHFGVALVQRM 1027
            IA NHFG  LVQRM
Sbjct:  336 IAYNHFGEGLVQRM 349          
BLAST of DY262548 vs. ExPASy Swiss-Prot
Match: PEL8_ARATH (Probable pectate lyase 8 OS=Arabidopsis thaliana GN=At3g07010 PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 1.456e-80
Identity = 142/253 (56.13%), Postives = 170/253 (67.19%), Query Frame = 3
Query:  237 HQHP--DPDAVAQDVQRRVNVSLSRRQALAINAQCQTGNPIDDCWHCDPNWAANRQRLADCSIGFAQGTLGGKGGQIYVITDSSDKDPANPTPGTLRHAVIQTEPLWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYXXXXXXXXXXXXXCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNN*FSHHNEVMLLGHHEQYALDMGDAVTL 989
            H+H   +PD VA  V   +  S  RR+    +  C TGNPIDDCW CD  W   R+RLADCSIGF +  +GG+ G+ YV+TD  D DP NP PGTLRHAVIQ EPLWI F  +M+I LK ELI+NS+KTIDGRG NV I    CLT+QY             CKP+GN M+ SSP+H G+R  +DGD ISIFGS  IW+DH SLS C DGL+DA+M ST IT+SNN F+HHNEVMLLGH + Y  D    VT+
Sbjct:   32 HEHAVENPDEVAAMVDMSIRNSTERRRLGYFS--CATGNPIDDCWRCDRKWQLRRKRLADCSIGFGRNAIGGRDGRFYVVTDPGDDDPVNPIPGTLRHAVIQDEPLWIIFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACLTIQYVTNIIVHGIHVHDCKPTGNAMVRSSPSHYGFRSMADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMSSTAITVSNNFFTHHNEVMLLGHSDSYTRDKVMQVTI 282          

HSP 2 Score: 25.0238 bits (53), Expect = 1.456e-80
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  986 IALNHFGVALVQRM 1027
            IA NHFG  L+QRM
Sbjct:  282 IAYNHFGEGLIQRM 295          
BLAST of DY262548 vs. ExPASy Swiss-Prot
Match: PEL14_ARATH (Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 1.116e-77
Identity = 139/253 (54.94%), Postives = 169/253 (66.80%), Query Frame = 3
Query:  237 HQHP--DPDAVAQDVQRRVNVSLSRRQALAINAQCQTGNPIDDCWHCDPNWAANRQRLADCSIGFAQGTLGGKGGQIYVITDSSDKDPANPTPGTLRHAVIQTEPLWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYXXXXXXXXXXXXXCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNN*FSHHNEVMLLGHHEQYALDMGDAVTL 989
            H+H   DP+ +A  V   +  S  RR+ L   + C TGNPIDDCW CD  W   R+RLADC+IGF +  +GG+ G+ Y++TD SD DP  P PGTLR+AVIQ EPLWI F  +M+I L  ELI+NS+KTIDGRG NV I G  CLT+QY             CK +GN M+ SS +H G+R  +DGDGISIFGS  IW+DH SLS C DGLIDAIMGST ITISNN  +HHNE +LLGH + Y  D    VT+
Sbjct:   33 HEHAVKDPEEIAAMVDMSIRNSTYRRK-LGFFSSCSTGNPIDDCWRCDKKWHRRRKRLADCAIGFGRNAVGGRDGRYYIVTDPSDHDPVTPKPGTLRYAVIQDEPLWIVFKRDMVITLSQELIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIIIHGINIHDCKRTGNAMVRSSESHYGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAIMGSTAITISNNYLTHHNEAILLGHTDSYTRDKMMQVTI 284          

HSP 2 Score: 25.0238 bits (53), Expect = 1.116e-77
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  986 IALNHFGVALVQRM 1027
            IA NHFG  L+QRM
Sbjct:  284 IAYNHFGEGLIQRM 297          
BLAST of DY262548 vs. ExPASy Swiss-Prot
Match: PEL20_ARATH (Probable pectate lyase 20 OS=Arabidopsis thaliana GN=At5g48900 PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 1.456e-77
Identity = 136/253 (53.75%), Postives = 173/253 (68.38%), Query Frame = 3
Query:  237 HQHP--DPDAVAQDVQRRVNVSLSRRQALAINAQCQTGNPIDDCWHCDPNWAANRQRLADCSIGFAQGTLGGKGGQIYVITDSSDKDPANPTPGTLRHAVIQTEPLWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYXXXXXXXXXXXXXCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNN*FSHHNEVMLLGHHEQYALDMGDAVTL 989
            H+H   +P+ VA  V   +  S +RR+    +  C TGNPIDDCW CD  W + R+ LA+C+IGF +  +GG+ G+ YV++D +D +P NP PGTLRHAVIQ EPLWI F  +M+I LK ELI+NS+KTIDGRG NV I    C+T+Q+             C+P+GN M+ SSP+H G+R  +DGDGISIFGS  IW+DH SLS C DGLIDA+M ST ITISNN F+HHNEVMLLGH + Y  D    VT+
Sbjct:   33 HEHAVENPEEVAAMVDMSIRNSTARRRLGYFS--CSTGNPIDDCWRCDRRWQSRRKHLANCAIGFGRNAIGGRDGRYYVVSDPNDDNPVNPKPGTLRHAVIQEEPLWIVFKRDMVITLKEELIMNSFKTIDGRGVNVHIANGACITIQFVTNIIIHGIHIHDCRPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSNCADGLIDAVMASTAITISNNYFTHHNEVMLLGHSDTYTRDKVMQVTI 283          

HSP 2 Score: 25.0238 bits (53), Expect = 1.456e-77
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  986 IALNHFGVALVQRM 1027
            IA NHFG  L+QRM
Sbjct:  283 IAYNHFGEGLIQRM 296          
The following BLAST results are available for this feature:
BLAST of DY262548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
PEL12_ARATH1.709e-9666.04Probable pectate lyase 12 OS=Arabidopsis thaliana ... [more]
PEL13_ARATH3.793e-9664.68Probable pectate lyase 13 OS=Arabidopsis thaliana ... [more]
PEL5_ARATH6.555e-8459.11Probable pectate lyase 5 OS=Arabidopsis thaliana G... [more]
PEL18_ARATH1.898e-8356.05Probable pectate lyase 18 OS=Arabidopsis thaliana ... [more]
PEL22_ARATH1.219e-8255.98Probable pectate lyase 22 OS=Arabidopsis thaliana ... [more]
PEL1_ARATH7.830e-8255.51Probable pectate lyase 1 OS=Arabidopsis thaliana G... [more]
PEL15_ARATH8.552e-8155.42Probable pectate lyase 15 OS=Arabidopsis thaliana ... [more]
PEL8_ARATH1.456e-8056.13Probable pectate lyase 8 OS=Arabidopsis thaliana G... [more]
PEL14_ARATH1.116e-7754.94Putative pectate lyase 14 OS=Arabidopsis thaliana ... [more]
PEL20_ARATH1.456e-7753.75Probable pectate lyase 20 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100BB07RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262548 ID=DY262548; Name=DY262548; organism=Citrus clementina; type=EST; length=1345bp
CTGTTCATTCAAGAGCAGGAAAGACATCTCCATTCTGCAATTTGCACCAG
CAGGCAGAAGCAAAAGCAAAAGCAAAAGCAAAGCAAAGCAAGGCAGCAGA
CAAACAAATACCCACCACCGTTATCATTCTTGTACCTTCAACAATGCTTC
TAAACACCTGCATTCTCTTAGAATGCCTCTTCTTCCTCATTTTCTCCTCT
TCTGCTACAATTTCTGCTCTCAATCTCACTTTACCCCATCAGCATCCTGA
CCCTGACGCTGTTGCTCAAGATGTGCAAAGGAGAGTTAATGTATCTCTAT
CAAGAAGACAAGCGCTCGCCATTAACGCCCAATGCCAAACCGGAAACCCC
ATCGATGACTGCTGGCACTGCGACCCAAACTGGGCAGCAAACCGGCAACG
GTTAGCCGACTGCAGCATCGGCTTCGCCCAAGGCACCCTCGGCGGCAAAG
GCGGCCAGATCTACGTCATCACCGACTCCTCCGACAAGGACCCGGCGAAC
CCCACGCCGGGCACCCTCCGCCACGCCGTCATCCAAACGGAACCCCTCTG
GATCACCTTCGCCTCCAACATGCTCATCAAGCTCAAACACGAGCTCATCA
TCAACAGCTACAAAACCATCGACGGCCGCGGCGCCAACGTCGAAATCACC
GGCAACGGCTGCCTCACGCTCCAGTACGTGTCCCACGTCATCATCCACAA
CGTCCACATCCACCACTGCAAGCCCTCGGGGAACACGATGATCGCCTCGT
CGCCGACCCACGTCGGGTACCGGGGCAAGTCGGACGGTGACGGGATCTCC
ATATTCGGCTCGCAGAAGATATGGGTGGATCACTGCTCGCTGAGCTACTG
CACCGACGGGCTGATCGACGCGATAATGGGGTCCACGGGGATAACGATCT
CCAACAATTAATTCTCGCACCACAATGAGGTGATGCTGCTGGGGCACCAC
GAACAGTACGCGCTCGATATGGGGGATGCAGTTACATTGCGTTAAACCAC
TTCGGTGTGGCGCTGGTGCAGCGAATGCACGGTGGCGGGCCGGGAACTAC
CCGGGGTCAATATGACTTCCCTCCGGGAAATTGGTAGGCATTTGCGGAGC
CCCAACCCACCCTAAAAATTAAGGGAATCCCTAACCGCTCCCCCCAAAAA
AATAGCCAAAAAGGGAAAAAAACCCGGGGAAAAAAAAAAAAGGAAGGGGG
CGGGGTGTGAATTTTAGAGACAGAAAGGGAAACAAATAGGAAAAAGGGGG
GGCACTTTTTTTGGCGCCCTGGCGGGCGCGGGGGGCCTAAAAAACAAAAA
AACACAAGAAAGGGCCCCCTCGGGTGGGGGGTTAGCACCAAAAAA
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