DY262548
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY262548 vs. ExPASy Swiss-Prot
Match: PEL12_ARATH (Probable pectate lyase 12 OS=Arabidopsis thaliana GN=At3g53190 PE=2 SV=2) HSP 1 Score: 350.903 bits (899), Expect = 1.709e-96 Identity = 175/265 (66.04%), Postives = 191/265 (72.08%), Query Frame = 3 Query: 213 SALNLTLPH-QHPDPDAVAQDVQRRVNVSLSRRQALAINAQ-----CQTGNPIDDCWHCDPNWAANRQRLADCSIGFAQGTLGGKGGQIYVITDSSDKDPANPTPGTLRHAVIQTEPLWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYXXXXXXXXXXXXXCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNN*FSHHNEVMLLGHHEQYALDMGDAVTL 989 S LN TL HPDP+ VA VQ +VN S++RRQAL Q C TGNPIDDCW CDPNW NRQ LADC IGF Q LGGKGGQ Y +TDSSD D NP PGTLR+ VIQ EPLWI F SNM+IKLK ELI NSYKT+DGRGANV I G GC+TLQY C SGNT + SSPTH G+R KSDGDGISIFGS+ IW+DHCSLS C DGLIDA+MGSTGITISNN FSHHNEVMLLGH + Y D G VT+ Sbjct: 24 SMLNRTLLLIPHPDPELVAYQVQWKVNASITRRQALDTTDQAGSTPCITGNPIDDCWKCDPNWPNNRQGLADCGIGFGQYALGGKGGQFYFVTDSSDDDAVNPKPGTLRYGVIQEEPLWIVFPSNMMIKLKQELIFNSYKTLDGRGANVHIVGGGCITLQYVSNIIIHNIHIHHCYQSGNTNVRSSPTHYGFRTKSDGDGISIFGSKDIWIDHCSLSRCKDGLIDAVMGSTGITISNNFFSHHNEVMLLGHSDHYEPDSGMQVTI 288 HSP 2 Score: 25.0238 bits (53), Expect = 1.709e-96 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2 Query: 986 IALNHFGVALVQRM 1027 IA NHFG L+QRM Sbjct: 288 IAFNHFGEKLIQRM 301
BLAST of DY262548 vs. ExPASy Swiss-Prot
Match: PEL13_ARATH (Probable pectate lyase 13 OS=Arabidopsis thaliana GN=PMR6 PE=1 SV=1) HSP 1 Score: 348.977 bits (894), Expect = 3.793e-96 Identity = 174/269 (64.68%), Postives = 199/269 (73.98%), Query Frame = 3 Query: 219 LNLTLPHQHPDPDAVAQDVQRRVNVSLSRRQ-----------ALAINAQCQTGNPIDDCWHC-DPNWAANRQRLADCSIGFAQGTLGGKGGQIYVITDSSDKDPANPTPGTLRHAVIQTEPLWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYXXXXXXXXXXXXXCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNN*FSHHNEVMLLGHHEQYALDMGDAVTL 989 LNLTLPHQHP PD+VA V R VN SL+RRQ + + ++ C+TGNPIDDCW C D +W+ NRQRLADCSIGF GTLGGK G+IYV+TDSSD +P NPTPGTLR+ VIQ EPLWI F+SNMLI+LK ELIINSYKT+DGRG+ V ITGNGCLTLQY CKPS RG+SDGDGISIFGSQKIWVDHCS+S+CTDGLIDA+MGST ITISNN F+HH+EVMLLGH + YA D G VT+ Sbjct: 26 LNLTLPHQHPSPDSVALHVIRSVNESLARRQLSSPSSSSSSSSSSSSSSCRTGNPIDDCWRCSDADWSTNRQRLADCSIGFGHGTLGGKNGKIYVVTDSSDNNPTNPTPGTLRYGVIQEEPLWIVFSSNMLIRLKQELIINSYKTLDGRGSAVHITGNGCLTLQYVQHIIIHNLHIYDCKPSAG---------FEKRGRSDGDGISIFGSQKIWVDHCSMSHCTDGLIDAVMGSTAITISNNYFTHHDEVMLLGHDDNYAPDTGMQVTI 285 HSP 2 Score: 25.7942 bits (55), Expect = 3.793e-96 Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 2 Query: 986 IALNHFGVALVQRM 1027 IA NHFG LVQRM Sbjct: 285 IAFNHFGQGLVQRM 298
BLAST of DY262548 vs. ExPASy Swiss-Prot
Match: PEL5_ARATH (Probable pectate lyase 5 OS=Arabidopsis thaliana GN=At1g67750 PE=2 SV=2) HSP 1 Score: 308.145 bits (788), Expect = 6.555e-84 Identity = 146/247 (59.11%), Postives = 174/247 (70.45%), Query Frame = 3 Query: 249 DPDAVAQDVQRRVNVSLSRRQALAINAQCQTGNPIDDCWHCDPNWAANRQRLADCSIGFAQGTLGGKGGQIYVITDSSDKDPANPTPGTLRHAVIQTEPLWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYXXXXXXXXXXXXXCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNN*FSHHNEVMLLGHHEQYALDMGDAVTL 989 +P+ V Q+V ++N S R+ L + C TGNPIDDCW CDP W NRQRLADC+IGF + +GG+ G+IYV+TDSSDKD NP PGTLRHAVIQ EPLWI FA +M+IKLK ELI+NS+KTIDGRGA+V I G C+T+QY CK GN + SP+H G+R SDGD +SIFG +WVDHCSLS C DGLIDAI GST ITISNN SHHN+VMLLGH + Y D VT+ Sbjct: 32 EPELVVQEVNEKINAS---RRNLGV-LSCGTGNPIDDCWRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHDCKRKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAITISNNYLSHHNKVMLLGHSDSYTRDKNMQVTI 274 HSP 2 Score: 25.7942 bits (55), Expect = 6.555e-84 Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 2 Query: 986 IALNHFGVALVQRM 1027 IA NHFG LVQRM Sbjct: 274 IAFNHFGEGLVQRM 287
BLAST of DY262548 vs. ExPASy Swiss-Prot
Match: PEL18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2) HSP 1 Score: 306.605 bits (784), Expect = 1.898e-83 Identity = 139/248 (56.05%), Postives = 179/248 (72.18%), Query Frame = 3 Query: 246 PDPDAVAQDVQRRVNVSLSRRQALAINAQCQTGNPIDDCWHCDPNWAANRQRLADCSIGFAQGTLGGKGGQIYVITDSSDKDPANPTPGTLRHAVIQTEPLWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYXXXXXXXXXXXXXCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNN*FSHHNEVMLLGHHEQYALDMGDAVTL 989 PDP++V ++V + +N S++ R+ L C TGNPIDDCW CDP+W +RQRLADC+IGF + +GG+ G+IYV+TDS + +P +P PGTLRHAV+Q EPLWI F +M I+LK ELI+NS+KTIDGRGA+V I+G C+T+QY CK GN M+ SSP H G+R SDGDG+SIFG +WVDHCS S C DGLIDAIMGST IT+SNN +HH++VMLLGH + Y+ D VT+ Sbjct: 28 PDPESVVEEVHKSINASVAGRRKLGY-LSCTTGNPIDDCWRCDPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGGNAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNHMTHHDKVMLLGHSDTYSRDKNMQVTI 274 HSP 2 Score: 25.7942 bits (55), Expect = 1.898e-83 Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 2 Query: 986 IALNHFGVALVQRM 1027 IA NHFG LVQRM Sbjct: 274 IAFNHFGEGLVQRM 287
BLAST of DY262548 vs. ExPASy Swiss-Prot
Match: PEL22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 1.219e-82 Identity = 145/259 (55.98%), Postives = 180/259 (69.50%), Query Frame = 3 Query: 213 SALNLTLPHQHPDPDAVAQDVQRRVNVSLSRRQALAINAQCQTGNPIDDCWHCDPNWAANRQRLADCSIGFAQGTLGGKGGQIYVITDSSDKDPANPTPGTLRHAVIQTEPLWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYXXXXXXXXXXXXXCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNN*FSHHNEVMLLGHHEQYALDMGDAVTL 989 SAL +LP DP+ V ++V R++N S+SRR+ + C +GNPIDDCW CD +W NR+RLADC IGF + +GG+ G+IYV+TD + DP NP PGTLR+AVIQ EPLWI F +M I+LK ELI+NS+KT+DGRGA+V I+G C+T+QY CK GNT + SP H GYR SDGDG+SIFG +WVDHCSLS C DGLIDAI GST ITISNN +HHN+VMLLGH + Y D VT+ Sbjct: 42 SALASSLPVS--DPELVVEEVHRKINESISRRKLGFFS--CGSGNPIDDCWRCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQDEPLWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDCKQGGNTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITISNNYLTHHNKVMLLGHSDTYEQDKNMQVTI 296 HSP 2 Score: 25.7942 bits (55), Expect = 1.219e-82 Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 2 Query: 986 IALNHFGVALVQRM 1027 IA NHFG LVQRM Sbjct: 296 IAFNHFGEGLVQRM 309
BLAST of DY262548 vs. ExPASy Swiss-Prot
Match: PEL1_ARATH (Probable pectate lyase 1 OS=Arabidopsis thaliana GN=At1g04680 PE=2 SV=2) HSP 1 Score: 299.671 bits (766), Expect = 7.830e-82 Identity = 141/254 (55.51%), Postives = 174/254 (68.50%), Query Frame = 3 Query: 237 HQHPDPDAVAQDVQRRVNVSL---SRRQALAINAQCQTGNPIDDCWHCDPNWAANRQRLADCSIGFAQGTLGGKGGQIYVITDSSDKDPANPTPGTLRHAVIQTEPLWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYXXXXXXXXXXXXXCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNN*FSHHNEVMLLGHHEQYALDMGDAVTL 989 H +PD VA +V +S+ + R+ L C TGNPIDDCW CDPNW NR+RLADC IGF + +GG+ G+ YV+TD D +P NP PGTLRHAVIQ PLWI F +M+I+LK ELI+NS+KTIDGRGANV I GC+T+Q+ CKP+GN M+ SS TH G+R +DGD ISIFGS +W+DH SLS+C DGL+DA+MGST ITISNN +HHNEVMLLGH + Y D VT+ Sbjct: 43 HAVTNPDEVADEVLALTEMSVRNHTERRKLGYFT-CGTGNPIDDCWRCDPNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDNPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIVHGLHIHDCKPTGNAMVRSSETHFGWRTMADGDAISIFGSSHVWIDHNSLSHCADGLVDAVMGSTAITISNNHLTHHNEVMLLGHSDSYMRDKAMQVTI 295 HSP 2 Score: 27.335 bits (59), Expect = 7.830e-82 Identity = 11/14 (78.57%), Postives = 12/14 (85.71%), Query Frame = 2 Query: 986 IALNHFGVALVQRM 1027 IA NHFGV L+QRM Sbjct: 295 IAYNHFGVGLIQRM 308
BLAST of DY262548 vs. ExPASy Swiss-Prot
Match: PEL15_ARATH (Probable pectate lyase 15 OS=Arabidopsis thaliana GN=At4g13710 PE=2 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 8.552e-81 Identity = 138/249 (55.42%), Postives = 173/249 (69.48%), Query Frame = 3 Query: 249 DPDAVAQDVQRRVNVSLSRRQALAINA--QCQTGNPIDDCWHCDPNWAANRQRLADCSIGFAQGTLGGKGGQIYVITDSSDKDPANPTPGTLRHAVIQTEPLWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYXXXXXXXXXXXXXCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNN*FSHHNEVMLLGHHEQYALDMGDAVTL 989 DPD VA +V + V +S R A C TGNPIDDCW CD NW NR+RLADC IGF + +GG+ G+ Y++TD +D+D NP PGTLRHAVIQ EPLWI F +M+I+LK ELI+NS+KTID RG+NV I C+T+Q+ CKP+GN M+ SSP+H G+R +DGD +SIFGS IW+DH SLS+C DGL+DA+MGST IT+SNN F+HHNEVMLLGH + Y D VT+ Sbjct: 88 DPDMVADEVAKLVQMSEQNRTARRKLGFFSCGTGNPIDDCWRCDRNWHKNRKRLADCGIGFGRNAIGGRDGRFYIVTDPTDEDVVNPKPGTLRHAVIQEEPLWIVFKRDMVIELKQELIMNSFKTIDARGSNVHIANGACITIQFITNVIIHGLHIHDCKPTGNAMVRSSPSHFGWRTMADGDAVSIFGSSHIWIDHNSLSHCADGLVDAVMGSTAITVSNNHFTHHNEVMLLGHSDSYTKDKLMQVTI 336 HSP 2 Score: 25.409 bits (54), Expect = 8.552e-81 Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = 2 Query: 986 IALNHFGVALVQRM 1027 IA NHFG LVQRM Sbjct: 336 IAYNHFGEGLVQRM 349
BLAST of DY262548 vs. ExPASy Swiss-Prot
Match: PEL8_ARATH (Probable pectate lyase 8 OS=Arabidopsis thaliana GN=At3g07010 PE=2 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 1.456e-80 Identity = 142/253 (56.13%), Postives = 170/253 (67.19%), Query Frame = 3 Query: 237 HQHP--DPDAVAQDVQRRVNVSLSRRQALAINAQCQTGNPIDDCWHCDPNWAANRQRLADCSIGFAQGTLGGKGGQIYVITDSSDKDPANPTPGTLRHAVIQTEPLWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYXXXXXXXXXXXXXCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNN*FSHHNEVMLLGHHEQYALDMGDAVTL 989 H+H +PD VA V + S RR+ + C TGNPIDDCW CD W R+RLADCSIGF + +GG+ G+ YV+TD D DP NP PGTLRHAVIQ EPLWI F +M+I LK ELI+NS+KTIDGRG NV I CLT+QY CKP+GN M+ SSP+H G+R +DGD ISIFGS IW+DH SLS C DGL+DA+M ST IT+SNN F+HHNEVMLLGH + Y D VT+ Sbjct: 32 HEHAVENPDEVAAMVDMSIRNSTERRRLGYFS--CATGNPIDDCWRCDRKWQLRRKRLADCSIGFGRNAIGGRDGRFYVVTDPGDDDPVNPIPGTLRHAVIQDEPLWIIFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACLTIQYVTNIIVHGIHVHDCKPTGNAMVRSSPSHYGFRSMADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMSSTAITVSNNFFTHHNEVMLLGHSDSYTRDKVMQVTI 282 HSP 2 Score: 25.0238 bits (53), Expect = 1.456e-80 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2 Query: 986 IALNHFGVALVQRM 1027 IA NHFG L+QRM Sbjct: 282 IAYNHFGEGLIQRM 295
BLAST of DY262548 vs. ExPASy Swiss-Prot
Match: PEL14_ARATH (Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 1.116e-77 Identity = 139/253 (54.94%), Postives = 169/253 (66.80%), Query Frame = 3 Query: 237 HQHP--DPDAVAQDVQRRVNVSLSRRQALAINAQCQTGNPIDDCWHCDPNWAANRQRLADCSIGFAQGTLGGKGGQIYVITDSSDKDPANPTPGTLRHAVIQTEPLWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYXXXXXXXXXXXXXCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNN*FSHHNEVMLLGHHEQYALDMGDAVTL 989 H+H DP+ +A V + S RR+ L + C TGNPIDDCW CD W R+RLADC+IGF + +GG+ G+ Y++TD SD DP P PGTLR+AVIQ EPLWI F +M+I L ELI+NS+KTIDGRG NV I G CLT+QY CK +GN M+ SS +H G+R +DGDGISIFGS IW+DH SLS C DGLIDAIMGST ITISNN +HHNE +LLGH + Y D VT+ Sbjct: 33 HEHAVKDPEEIAAMVDMSIRNSTYRRK-LGFFSSCSTGNPIDDCWRCDKKWHRRRKRLADCAIGFGRNAVGGRDGRYYIVTDPSDHDPVTPKPGTLRYAVIQDEPLWIVFKRDMVITLSQELIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIIIHGINIHDCKRTGNAMVRSSESHYGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAIMGSTAITISNNYLTHHNEAILLGHTDSYTRDKMMQVTI 284 HSP 2 Score: 25.0238 bits (53), Expect = 1.116e-77 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2 Query: 986 IALNHFGVALVQRM 1027 IA NHFG L+QRM Sbjct: 284 IAYNHFGEGLIQRM 297
BLAST of DY262548 vs. ExPASy Swiss-Prot
Match: PEL20_ARATH (Probable pectate lyase 20 OS=Arabidopsis thaliana GN=At5g48900 PE=2 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 1.456e-77 Identity = 136/253 (53.75%), Postives = 173/253 (68.38%), Query Frame = 3 Query: 237 HQHP--DPDAVAQDVQRRVNVSLSRRQALAINAQCQTGNPIDDCWHCDPNWAANRQRLADCSIGFAQGTLGGKGGQIYVITDSSDKDPANPTPGTLRHAVIQTEPLWITFASNMLIKLKHELIINSYKTIDGRGANVEITGNGCLTLQYXXXXXXXXXXXXXCKPSGNTMIASSPTHVGYRGKSDGDGISIFGSQKIWVDHCSLSYCTDGLIDAIMGSTGITISNN*FSHHNEVMLLGHHEQYALDMGDAVTL 989 H+H +P+ VA V + S +RR+ + C TGNPIDDCW CD W + R+ LA+C+IGF + +GG+ G+ YV++D +D +P NP PGTLRHAVIQ EPLWI F +M+I LK ELI+NS+KTIDGRG NV I C+T+Q+ C+P+GN M+ SSP+H G+R +DGDGISIFGS IW+DH SLS C DGLIDA+M ST ITISNN F+HHNEVMLLGH + Y D VT+ Sbjct: 33 HEHAVENPEEVAAMVDMSIRNSTARRRLGYFS--CSTGNPIDDCWRCDRRWQSRRKHLANCAIGFGRNAIGGRDGRYYVVSDPNDDNPVNPKPGTLRHAVIQEEPLWIVFKRDMVITLKEELIMNSFKTIDGRGVNVHIANGACITIQFVTNIIIHGIHIHDCRPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSNCADGLIDAVMASTAITISNNYFTHHNEVMLLGHSDTYTRDKVMQVTI 283 HSP 2 Score: 25.0238 bits (53), Expect = 1.456e-77 Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2 Query: 986 IALNHFGVALVQRM 1027 IA NHFG L+QRM Sbjct: 283 IAYNHFGEGLIQRM 296 The following BLAST results are available for this feature:
BLAST of DY262548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262548 ID=DY262548; Name=DY262548; organism=Citrus clementina; type=EST; length=1345bpback to top |