DY262551

Overview
NameDY262551
Unique NameDY262551
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1288
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262551 vs. ExPASy Swiss-Prot
Match: MDM20_MOUSE (N-terminal acetyltransferase B complex subunit MDM20 OS=Mus musculus GN=Mdm20 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.505e-16
Identity = 62/222 (27.93%), Postives = 104/222 (46.85%), Query Frame = 3
Query:  261 ERRVRPIWDAIDSRQFKNALKQSTALLAKYPNSPYALALKALVLERMGKCDESLSVSLQAKDLLYQNXXXXXXXXXXXXXQIVFQRLDRLDLATSCYEYACGKYHNNMDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCG---NXXXXXXXXXXXXXXXHVASHSLHEPEALI-VYISILETTAKYGDALEILSGTLGSLLVIE 914
            +RR+RPI+D +D+   K A++Q+  LL K+ +   A  LKA+ L+R GK +E+ +++ +   L                  I+++ + R +L T  YE A  K  N+ ++   LF  Y R   + K QQ  + +YK   +  +  W+V S+ +Q +     N                +      E EA + +Y  ILE   KY +AL+++ G LG  L  E
Sbjct:   12 DRRLRPIYDYLDNGNNKMAIQQADKLLKKHKDLHCAKVLKAIGLQRTGKQEEAFTLAQEVAAL------EPTDDNSLQALTILYREMHRPELVTKLYEAAVKKVPNSEEYHSHLFMAYARVGEYKKMQQAGMALYKIVPKNPYYFWSVMSLIMQSISARDENLSKTMFLPLAERMVEKMVKEDKIEAEAEVELYYMILERLGKYQEALDVIRGKLGEKLTSE 227          
BLAST of DY262551 vs. ExPASy Swiss-Prot
Match: MDM20_HUMAN (N-terminal acetyltransferase B complex subunit MDM20 OS=Homo sapiens GN=MDM20 PE=1 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.505e-16
Identity = 62/222 (27.93%), Postives = 104/222 (46.85%), Query Frame = 3
Query:  261 ERRVRPIWDAIDSRQFKNALKQSTALLAKYPNSPYALALKALVLERMGKCDESLSVSLQAKDLLYQNXXXXXXXXXXXXXQIVFQRLDRLDLATSCYEYACGKYHNNMDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCG---NXXXXXXXXXXXXXXXHVASHSLHEPEALI-VYISILETTAKYGDALEILSGTLGSLLVIE 914
            +RR+RPI+D +D+   K A++Q+  LL K+ +   A  LKA+ L+R GK +E+ +++ +   L                  I+++ + R +L T  YE A  K  N+ ++   LF  Y R   + K QQ  + +YK   +  +  W+V S+ +Q +     N                +      E EA + +Y  ILE   KY +AL+++ G LG  L  E
Sbjct:   12 DRRLRPIYDYLDNGNNKMAIQQADKLLKKHKDLHCAKVLKAIGLQRTGKQEEAFTLAQEVAAL------EPTDDNSLQALTILYREMHRPELVTKLYEAAVKKVPNSEEYHSHLFMAYARVGEYKKMQQAGMALYKIVPKNPYYFWSVMSLIMQSISAQDENLSKTMFLPLAERMVEKMVKEDKIEAEAEVELYYMILERLGKYQEALDVIRGKLGEKLTSE 227          
BLAST of DY262551 vs. ExPASy Swiss-Prot
Match: MDM20_RAT (N-terminal acetyltransferase B complex subunit MDM20 OS=Rattus norvegicus GN=Mdm20 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 4.378e-16
Identity = 61/222 (27.48%), Postives = 104/222 (46.85%), Query Frame = 3
Query:  261 ERRVRPIWDAIDSRQFKNALKQSTALLAKYPNSPYALALKALVLERMGKCDESLSVSLQAKDLLYQNXXXXXXXXXXXXXQIVFQRLDRLDLATSCYEYACGKYHNNMDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCG---NXXXXXXXXXXXXXXXHVASHSLHEPEALI-VYISILETTAKYGDALEILSGTLGSLLVIE 914
            +RR+RPI+D +D+   K A++Q+  LL K+ +   A  LKA+ L+R G+ +E+ +++ +   L                  I+++ + R +L T  YE A  K  N+ ++   LF  Y R   + K QQ  + +YK   +  +  W+V S+ +Q +     N                +      E EA + +Y  ILE   KY +AL+++ G LG  L  E
Sbjct:   12 DRRLRPIYDYLDNGNNKMAIQQADKLLKKHRDLHCAKVLKAIGLQRTGRQEEAFTLAQEVAAL------EPTDDNSLQALTILYREMHRPELVTKLYEAAVKKVPNSEEYHSHLFMAYARVGEYKKMQQAGMALYKIVPKNPYYFWSVMSLIMQSISARDENLSKTMFLPLAERMVEKMVKEDKIEAEAEVELYYMILERLGKYQEALDVIRGKLGEKLTSE 227          
BLAST of DY262551 vs. ExPASy Swiss-Prot
Match: PSDIN_DROME (Phagocyte signaling-impaired protein OS=Drosophila melanogaster GN=psidin PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.706e-15
Identity = 58/229 (25.33%), Postives = 101/229 (44.10%), Query Frame = 3
Query:  225 MASKFGLAGGIPERRVRPIWDAIDSRQFKNALKQSTALLAKYPNSPYALALKALVLERMGKCDESLSVSLQAKDLLYQNXXXXXXXXXXXXXQIVFQRLDRLDLATSCYEYACGKYHNNMDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCG------NXXXXXXXXXXXXXXXHVASHSLHEPEALIVYISILETTAKYGDALEILSGTL 893
            MA + G+   + ERR+RP++D ++    + AL++S  LL K+PN   A ALK L L R+G+ DES        +                     ++ +++LD     Y++A  +   N + +  LF  +VR   +  QQ  A+++YK   +  +  W+V S+  Q + G                      H+    +   +   +Y+ IL+   KY +A E L+G L
Sbjct:    1 MAQQQGMDSALFERRLRPVYDNLEVGNNRKALQESEKLLRKHPNLLCARALKGLSLLRLGRYDESHGCLQTVAE------EKPTDDSTLQVLSFCYREMEQLDKIVELYQHAVKQNPGNEELLAHLFISHVRVEDYKAQQAVALQLYKAQPKNAYYFWSVISVVFQGIRGPESALPEKRKIYLGLAQRMVDKHIKEGKMETEQEAFLYLHILKLQNKYQEAWEFLTGEL 223          
BLAST of DY262551 vs. ExPASy Swiss-Prot
Match: PSDIN_DROPS (Phagocyte signaling-impaired protein OS=Drosophila pseudoobscura pseudoobscura GN=psidin PE=3 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 1.408e-14
Identity = 61/244 (25.00%), Postives = 111/244 (45.49%), Query Frame = 3
Query:  240 GLAGGIPERRVRPIWDAIDSRQFKNALKQSTALLAKYPNSPYALALKALVLERMGKCDESLS-VSLQAKDLLYQNXXXXXXXXXXXXXQIVFQRLDRLDLATSCYEYACGKYHNNMDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCG------NXXXXXXXXXXXXXXXHVASHSLHEPEALIVYISILETTAKYGDALEILSGTL------GSLLVIEFDKLRI 932
            G+   + ERR+RPI+D ++    + AL++S  LL K+P+   A ALK L L R+G+ +ES   +   A+D                     ++ +++L+     Y++A  K   N + +  LF  YVR   +  QQ  A+++YK   +  +  W+V S+  Q + G                      H+    L   +   +Y+ IL+   K+ +A E L+G L      G+ + ++F+ L++
Sbjct:    5 GMDTALFERRLRPIYDNLEVGNNRKALQESEKLLRKHPSMLCARALKGLALLRLGRYEESHGCLQAVAED-------KPTDDSTLQVLSFCYREMEQLNKIVELYQHAVKKNPGNEELLAHLFISYVRVEDYKAQQAVALQLYKAQPKNAYYFWSVISVVFQGIRGPESAVPEKRKIYLGLAQRMVEKHIREGKLESEQEAFLYLHILKLQKKFQEAWEFLTGELCAKLYPGAPVSMKFELLKV 241          
BLAST of DY262551 vs. ExPASy Swiss-Prot
Match: PSDIN_ANOGA (Phagocyte signaling-impaired protein OS=Anopheles gambiae GN=psidin PE=3 SV=4)

HSP 1 Score: 75.485 bits (184), Expect = 7.727e-13
Identity = 53/217 (24.42%), Postives = 92/217 (42.40%), Query Frame = 3
Query:  261 ERRVRPIWDAIDSRQFKNALKQSTALLAKYPNSPYALALKALVLERMGKCDESLSVSLQAKDLLYQNXXXXXXXXXXXXXQIVFQRLDRLDLATSCYEYACGKYHNNMDHMMGLFNCYVREYSFVKQQQTAIKMYKHAGEERFLLWAVCSIQLQVLCG------NXXXXXXXXXXXXXXXHVASHSLHEPEALIVYISILETTAKYGDALEILSGTL 893
            ER++RPIW++I+   +K AL+    +L K P    A ALKA   +R+G+ ++S  +    ++                   + ++   RLD   + +  A  +   + + +  LF  Y+R   F   Q  A+++YK      +  WAV S+ LQ L G                       +A + L   +   +Y+ IL+   KY +A + L G L
Sbjct:    9 ERKLRPIWESIEIGNYKKALQDVEKMLKKKPTLQCARALKAWAYQRLGRTEDSAPLIAALEE------EQPIEATTLHALTLYYKETQRLDKICTLFSNAVRQVPGSEELLSQLFIAYMRIDDFKALQSVALQLYKLRPRNSYYFWAVMSVVLQALRGPDAHNAQKAQLLLVLAQRMVDKFIAENKLEGAQEAQLYLQILQEQHKYSEAYDFLQGAL 219          
The following BLAST results are available for this feature:
BLAST of DY262551 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
MDM20_MOUSE1.505e-1627.93N-terminal acetyltransferase B complex subunit MDM... [more]
MDM20_HUMAN1.505e-1627.93N-terminal acetyltransferase B complex subunit MDM... [more]
MDM20_RAT4.378e-1627.48N-terminal acetyltransferase B complex subunit MDM... [more]
PSDIN_DROME3.706e-1525.33Phagocyte signaling-impaired protein OS=Drosophila... [more]
PSDIN_DROPS1.408e-1425.00Phagocyte signaling-impaired protein OS=Drosophila... [more]
PSDIN_ANOGA7.727e-1324.42Phagocyte signaling-impaired protein OS=Anopheles ... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA100BB10RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262551 ID=DY262551; Name=DY262551; organism=Citrus clementina; type=EST; length=1288bp
TACAAGCGTGCGACCTTTTCCTTATCATTTCTATTTACACCCGTATTCAA
AACACAATACACTGCTGTAGACTCCAGTCCTTCGCTCTGCTTTATTATAA
TCAGATCATGTTAGGTTAGGTTTCCAGTTTCCACAGAAACAGAGCGCAAA
GGTTTTAAACAGGATCTTTTTGTTTACCCCAAGTCAAGTCCCCAGCTGGA
AGAACTACATACAGAACAAAACAAATGGCTTCGAAATTTGGATTGGCCGG
TGGCATACCGGAGCGGCGTGTCCGTCCGATATGGGACGCCATCGATTCTC
GTCAGTTCAAGAACGCTCTGAAGCAGTCCACTGCTCTGCTCGCCAAATAC
CCCAATTCTCCTTACGCTCTTGCGCTTAAAGCTCTGGTTTTGGAGAGAAT
GGGGAAATGTGATGAGTCATTATCTGTTTCTTTACAAGCGAAAGACTTAT
TGTATCAGAATGACTCTACTCTGATGGATGATCTTACTCTCAGCACTTTG
CAGATTGTTTTCCAACGACTTGATCGCTTGGACTTGGCAACAAGCTGTTA
CGAGTATGCTTGTGGAAAATATCACAACAATATGGATCACATGATGGGGC
TTTTCAACTGTTATGTTCGTGAATATTCCTTTGTGAAGCAACAACAGACA
GCTATTAAAATGTACAAGCATGCTGGTGAAGAAAGGTTTCTACTGTGGGC
AGTGTGTAGCATCCAATTACAGGTGCTTTGCGGAAATGGCGGAGAGAAGC
TCTTACTATTAGCTGAAGGTTTACTTAAGAAACATGTTGCCTCCCATAGC
TTGCATGAGCCTGAAGCCCTTATCGTCTACATTTCCATATTGGAAACAAC
AGCAAAGTATGGTGATGCTCTGGAAATTCTCTCTGGAACATTAGGATCAC
TTTTAGTGATTGAATTCGATAAGTTACGCATACAGGTACTTTCTGAAGCT
TTCACATTCGTTTTAAGATCAAGACAATACTGTTTGGCTTAATATTTTCC
TGATTTTATGAATATATACAAATATGTCTTTTGACCTGCCAATCCTTCAA
TTCCTTAGGACTCCTTGCCCCTTTTAAAGGTTTTTTATTTCCTTCTTCGG
GGATCCCTATTTTTTCTTGAAAAATTGGAAACTGGGAAAAATGGAAAAGG
AGGGAATGAATTTCCCTACTAAGGAAAGATCCGGAAAGGAAAAGGGGGAA
AAATTGAAAATTTAAAAAAAAAGGGGGGAAAAAGGGGTATCCTCTTCTTT
TTGGGGGGGGGGGGTAGTTCTCTAATTTTTTAAAATAA
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