DY262559

Overview
NameDY262559
Unique NameDY262559
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1104
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262559 vs. ExPASy Swiss-Prot
Match: KCS11_ARATH (3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana GN=KCS11 PE=1 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 3.908e-63
Identity = 122/210 (58.10%), Postives = 156/210 (74.29%), Query Frame = 1
Query:   91 AVDDFSKLWNELRFNFGTLLLCLVSLVFTSTVYLMSRPRKVYLVNFACYKPDNPSQMCSRKLFMQIASKIGIFSEETLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARKETEGVIIGAIDELLDKTGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQVCLHCYFCYLHFSSLS 720
            +V D   LW  L++N  ++++C + LVF  T+Y M+RPR VYLVNF+C+KPD  S+ C++K+FM  +   G F+EE L F +KIL+RSG+G  +Y+P+A+L+ P     M EARKE E V+ GAIDELL KT V P+DIGIL+VN SLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAK LL    + Y   +   +++
Sbjct:   60 SVTDLRSLWEHLQYNLISVVVCSMLLVFLMTIYFMTRPRPVYLVNFSCFKPDE-SRKCTKKIFMDRSKLTGSFTEENLEFQRKILQRSGLGESTYLPEAVLNVPPNPC-MKEARKEAETVMFGAIDELLAKTNVNPKDIGILIVNCSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLHSIPNTYAMVISMENIT 267          
BLAST of DY262559 vs. ExPASy Swiss-Prot
Match: KCS19_ARATH (3-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana GN=KCS19 PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 5.104e-63
Identity = 123/199 (61.81%), Postives = 156/199 (78.39%), Query Frame = 1
Query:   94 VDDFSKLWNELRFNFGTLLLCLVSLVFTSTVYLMSRPRKVYLVNFACYKPDNPSQMCSRKLFMQIASKIGIFSEETLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARKETEGVIIGAIDELLDKTGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQVCLHCY 690
            ++D S L+N LRF+F +  L    L+  ST Y  +RPR+V+L++F+CYKPD PS +C+R+ FM  + ++GIF+E+ L+F +KILERSG+G  +Y P+A+L  P     M EARKE E V+ GAID +L+KTGVKP+DIGILVVN SLFNPTPSLSAM+VN YKLRGNILSYNLGGMGCSAGLISIDLAKQ+LQV  + Y
Sbjct:   72 INDLSLLYNTLRFHFLSATLATALLISLSTAYFTTRPRRVFLLDFSCYKPD-PSLICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPC-MEEARKEAETVMFGAIDAVLEKTGVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNILSYNLGGMGCSAGLISIDLAKQMLQVQPNSY 268          
BLAST of DY262559 vs. ExPASy Swiss-Prot
Match: KCS17_ARATH (3-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana GN=KCS17 PE=2 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 2.371e-60
Identity = 119/201 (59.20%), Postives = 158/201 (78.61%), Query Frame = 1
Query:   91 AVDDFSKLWNEL-RFNFGTLLLCLVSLVFTSTVYLMSRPRKVYLVNFACYKPDNPSQMCSRKLFMQIASKIGIFSEETLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARKETEGVIIGAIDELLDKTGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQVCLHCY 690
            ++ D + L+N L +F+F +  L    L+F +T+Y  +RPR+++L++FACYKPD+ S +C+R+ FM  + ++GIF+E+ L+F +KILERSG+G  +Y P+A+L  P     M+EARKE E V+ GAID +L+KTGV P+DIGILVVN SLFNPTPSLSAM+VN YKLRGN+LSYNLGGMGCSAGLISIDLAKQLLQV  + Y
Sbjct:   64 SLTDLTLLYNHLLKFHFLSSTLFAALLIFLTTLYFTTRPRRIFLLDFACYKPDS-SLICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPC-MSEARKEAETVMFGAIDAVLEKTGVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNVLSYNLGGMGCSAGLISIDLAKQLLQVQPNSY 262          
BLAST of DY262559 vs. ExPASy Swiss-Prot
Match: KCS10_ARATH (3-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana GN=FDH PE=1 SV=2)

HSP 1 Score: 208.764 bits (530), Expect = 4.788e-53
Identity = 103/190 (54.21%), Postives = 143/190 (75.26%), Query Frame = 1
Query:  103 FSKLWNELRFNFGTLLLCLVSLVFTSTVYLMSRPRKVYLVNFACYKPDNPSQMCSRKLFMQIASKIGIFSEETLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARKETEGVIIGAIDELLDKTGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQ 672
            + KLW+   ++  T++      V T+ VY MSRPR VYL++FACYKP +  ++ +++ F+++A K G F EETL F K+IL+ SG+G+ +YVP++ + +      M E R+E   VI GA+DEL +KT VKP+D+G+LVVN S+FNPTPSLSAMV+NHYK+RGNILSYNLGGMGCSAG+I+IDLA+ +LQ
Sbjct:   88 WKKLWD---YDLATVIGFFGVFVLTACVYFMSRPRSVYLIDFACYKPSDEHKV-TKEEFIELARKSGKFDEETLGFKKRILQASGIGDETYVPRS-ISSSENITTMKEGREEASTVIFGALDELFEKTRVKPKDVGVLVVNCSIFNPTPSLSAMVINHYKMRGNILSYNLGGMGCSAGIIAIDLARDMLQ 272          
BLAST of DY262559 vs. ExPASy Swiss-Prot
Match: KCS4_ARATH (3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 6.253e-53
Identity = 111/199 (55.78%), Postives = 142/199 (71.36%), Query Frame = 1
Query:   97 DDFSKLWNELRFNFGTLLLCLVSLVFTSTVYLMSRPRKVYLVNFACY-KPDNPSQMCSRKLFMQIASKIGIFSEETLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARKETEGVIIGAIDELLDKTGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQVCLHCY 690
            DD  +LW  L++N  ++++C   LVF  TVY+M+RPR VYLV+F+CY  PD+     +R  FM+ +   G F +  L F +KILERSG+G  +YVP+AM   P    +MA AR+E E V+ GA+D L   T VKP+DIGILVVN SLFNPTPSLSAM+VN YKLRGNI SYNLGGMGCSAG+I++DLAK +L V  + Y
Sbjct:   74 DDLKQLWIHLQYNLVSIIICSAILVFGLTVYVMTRPRPVYLVDFSCYLPPDHLKAPYAR--FMEHSRLTGDFDDSALEFQRKILERSGLGEDTYVPEAMHYVPP-RISMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSYNLGGMGCSAGVIAVDLAKDMLLVHRNTY 269          
BLAST of DY262559 vs. ExPASy Swiss-Prot
Match: KCS9_ARATH (3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana GN=KCS9 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 5.294e-52
Identity = 106/198 (53.54%), Postives = 141/198 (71.21%), Query Frame = 1
Query:   97 DDFSKLWNELRFNFGTLLLCLVSLVFTSTVYLMSRPRKVYLVNFACYKPDNPSQMCSRKLFMQIASKIGIFSEETLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARKETEGVIIGAIDELLDKTGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQVCLHCY 690
            DD  ++W  L++N    +      +F STVY+MSRPR VYLV+++CY P    Q+  +K FM  +  I  F+E +L F +KILERSG+G  +Y+P+A+   P     MA AR+E+E V+ GA+D+L + T + PRDIG+LVVN SLFNPTPSLSAM+VN YKLRGN+ S+NLGGMGCSAG+ISIDLAK +LQV  + Y
Sbjct:   70 DDLYQIWLHLQYNLVAFIFLSALAIFGSTVYIMSRPRSVYLVDYSCYLPPESLQVKYQK-FMDHSKLIEDFNESSLEFQRKILERSGLGEETYLPEALHCIPPRPTMMA-AREESEQVMFGALDKLFENTKINPRDIGVLVVNCSLFNPTPSLSAMIVNKYKLRGNVKSFNLGGMGCSAGVISIDLAKDMLQVHRNTY 265          
BLAST of DY262559 vs. ExPASy Swiss-Prot
Match: KCS1_ARATH (3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 7.644e-51
Identity = 100/200 (50.00%), Postives = 145/200 (72.50%), Query Frame = 1
Query:   97 DDFSKLWNE--LRFNFGTLLLCLVSLVFTSTVYLMSRPRKVYLVNFACYKPDNPSQMCSRKLFMQIASKIGIFSEETLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARKETEGVIIGAIDELLDKTGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQVCLHCY 690
            D FS+LW+   ++ +  T L CLV L F  T+Y+ +R + VYLV+F+CYKP++  ++ S   F+ +  + G F+++T+ F ++I  R+G+G+ +Y+P+ +   P  + NM+EAR E E V+ GA+D L +KTG+KP ++GIL+VN SLFNPTPSLSAM+VNHYK+R +I SYNLGGMGCSAGLISIDLA  LL+   + Y
Sbjct:   82 DTFSELWSNQAVQLDTATRLTCLVFLSFVLTLYVANRSKPVYLVDFSCYKPEDERKI-SVDSFLTMTEENGSFTDDTVQFQQRISNRAGLGDETYLPRGITSTPP-KLNMSEARAEAEAVMFGALDSLFEKTGIKPAEVGILIVNCSLFNPTPSLSAMIVNHYKMREDIKSYNLGGMGCSAGLISIDLANNLLKANPNSY 279          
BLAST of DY262559 vs. ExPASy Swiss-Prot
Match: KCS2_ARATH (Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis thaliana GN=KCS2 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 9.670e-46
Identity = 95/185 (51.35%), Postives = 129/185 (69.73%), Query Frame = 1
Query:  121 ELRFNFGTLLLCLVSLVFTSTVYLMSRPRKVYLVNFACYKPDNPSQMCSRKLFMQIASKIGIFSEETLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARKETEGVIIGAIDELLDKTGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQV 675
            +L +N    +  +   +  S V+ MSRPR +YL++++CY P + SQ  S + FM  +S I  FSE +L F +KIL RSG+G  +Y+P ++   P     MA AR+E E VI GA+D L + T + PR+IG+LVVN SLFNPTPSLSAM+VN YKLRGNI S+NLGGMGCSAG+I++DLA  +LQ+
Sbjct:   52 QLYYNSTGFIFVITLAIVGSIVFFMSRPRSIYLLDYSCYLPPS-SQKVSYQKFMNNSSLIQDFSETSLEFQRKILIRSGLGEETYLPDSIHSIPP-RPTMAAAREEAEQVIFGALDNLFENTKINPREIGVLVVNCSLFNPTPSLSAMIVNKYKLRGNIKSFNLGGMGCSAGVIAVDLASDMLQI 234          
BLAST of DY262559 vs. ExPASy Swiss-Prot
Match: KCS16_ARATH (3-ketoacyl-CoA synthase 16 OS=Arabidopsis thaliana GN=KCS16 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.824e-44
Identity = 97/205 (47.32%), Postives = 140/205 (68.29%), Query Frame = 1
Query:   91 AVDDFSKLWNELRFNFGTLLLCLVSLVFTSTVYLMSRPRKVYLVNFACYKPDNPSQMCSRKLF--MQIASKIGIFSEET---LSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARKETEGVIIGAIDELLDKTGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQVCLHCY 690
            +  D    +  L+ N  +L +  + L   ST+YLM+RP+ VYLV+F+CY P +  +  ++++   +++  + G + +E+   + F +KILERSG+G  +YVP+ +   P  ++N+A +R ETE VIIGA+D L   TG+ P DIGILVVNSS FNPTPSLS+++VN +KLR NI S NLGGMGCSAG+I+ID AK LLQV  + Y
Sbjct:   39 STQDLQNFYLYLQNNHTSLTMFFLYLALGSTLYLMTRPKPVYLVDFSCYLPPSHLKASTQRIMQHVRLVREAGAWKQESDYLMDFCEKILERSGLGQETYVPEGLQTLPL-QQNLAVSRIETEEVIIGAVDNLFRNTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTY 242          
BLAST of DY262559 vs. ExPASy Swiss-Prot
Match: KCS8_ARATH (3-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana GN=KCS8 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 3.439e-43
Identity = 99/207 (47.83%), Postives = 138/207 (66.67%), Query Frame = 1
Query:   94 VDDFSKL-WNELRFNFGTLLLCLVSLVFTSTVYLMSRPRKVYLVNFACYKPDNPSQMCSRKLF--MQIASKIGIF-----SEETLSFHKKILERSGMGNMSYVPKAMLDNPAGEKNMAEARKETEGVIIGAIDELLDKTGVKPRDIGILVVNSSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQVCLHCY 690
            V+D  K   +  + N  T+ L L  +VF   +Y+++RP+ VYLV+F+CY P +  ++  + L    + A + G+      S+  + F +KILERSG+G  +Y+P+ +   P  ++ M  +RKETE VI GA+D L   TGVKP DIGILVVNSS FNPTPSL++M+VN YKLR NI S NLGGMGCSAG+I++D+AK LLQV  + Y
Sbjct:   29 VEDLQKFSLHHTQNNLQTISLLLFLVVFVWILYMLTRPKPVYLVDFSCYLPPSHLKVSIQTLMGHARRAREAGMCWKNKESDHLVDFQEKILERSGLGQETYIPEGLQCFPL-QQGMGASRKETEEVIFGALDNLFRNTGVKPDDIGILVVNSSTFNPTPSLASMIVNKYKLRDNIKSLNLGGMGCSAGVIAVDVAKGLLQVHRNTY 234          
The following BLAST results are available for this feature:
BLAST of DY262559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
KCS11_ARATH3.908e-6358.103-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana... [more]
KCS19_ARATH5.104e-6361.813-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana... [more]
KCS17_ARATH2.371e-6059.203-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana... [more]
KCS10_ARATH4.788e-5354.213-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana... [more]
KCS4_ARATH6.253e-5355.783-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana ... [more]
KCS9_ARATH5.294e-5253.543-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana ... [more]
KCS1_ARATH7.644e-5150.003-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana ... [more]
KCS2_ARATH9.670e-4651.35Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis ... [more]
KCS16_ARATH1.824e-4447.323-ketoacyl-CoA synthase 16 OS=Arabidopsis thaliana... [more]
KCS8_ARATH3.439e-4347.833-ketoacyl-CoA synthase 8 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100BC07RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262559 ID=DY262559; Name=DY262559; organism=Citrus clementina; type=EST; length=1104bp
TTTCATTTGTTGGCTTCCGTTCATATACACTAGCTTCCGCTTTTAAATTT
TCTTCAGCTCCTGCAACTTCTATTACTACTTAAAACCCTAGCTGTTGATG
ATTTCTCCAAGCTATGGAACGAGCTCAGGTTCAACTTTGGGACACTGCTT
TTATGCTTGGTTTCTCTTGTATTTACATCGACCGTTTACCTAATGAGTCG
CCCGAGAAAAGTTTACTTGGTGAACTTTGCTTGTTACAAGCCTGACAATC
CATCTCAAATGTGCAGCCGAAAACTTTTCATGCAAATAGCGAGCAAAATT
GGGATATTTTCAGAGGAAACTTTATCCTTTCACAAGAAAATTCTAGAGAG
ATCCGGGATGGGGAATATGTCATACGTCCCGAAAGCCATGTTGGACAACC
CGGCGGGTGAGAAAAATATGGCGGAGGCAAGGAAGGAGACTGAGGGTGTA
ATAATCGGAGCAATCGATGAGCTCTTGGACAAAACTGGGGTGAAGCCTAG
AGATATTGGAATTCTTGTGGTGAACAGCAGCTTGTTTAATCCAACGCCAT
CTTTGTCAGCGATGGTTGTGAATCACTACAAGCTTAGAGGCAACATTTTG
AGCTATAATCTTGGTGGTATGGGTTGCAGTGCTGGTCTTATTTCTATCGA
CCTCGCCAAACAGCTTTTGCAGGTTTGCCTTCATTGTTATTTCTGTTATT
TACATTTCTCTAGTCTCTCAGAGTTCATGATAGTTAATTAATGTAATGAA
AAAATTGAGGAGTGTGACAAAATATTGGTGATCTATAGTATGCATTAATT
GATCTCCTCTCAGAGCTATTTAGAATTAATCAAATCATGTGGGTCATCGG
CACAACTGGTTGATAAACACACACCCCCCCGGGGGCCCGCCCCGCGGCGA
TGAATACGAATATTGATTGATTTAAAACAAATGTCTCAGTATATGGATGT
ATAGTTCATCCAGGCTTTTTTCCATAACGTTTAATGCTTCGCTGGTACTT
CGCAATACCAAAAGGAATTCTCCCTCCCAATATGTGTAAGGGAAAGAAAT
TTTTCTTGGATAAATTTTTAAAATATTTTTAATGGGGAATTACTTTTTTT
TTGG
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