DY262747

Overview
NameDY262747
Unique NameDY262747
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1028
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig995 contig Ccv1_Contig995:34..1061. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.539e-21
Identity = 78/255 (30.59%), Postives = 121/255 (47.45%), Query Frame = 1
Query:  127 ILGFEDIFSVKVWRASMAELLGTAVLVFAL----DTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKV 876
            ++ F+ +++   W+A  AE L  A+L+F L     TI     +       +++S                ISGGHINP V+ A   T   S +++  YI AQC+G I GA  L  V    +     +GG  +  V     G +  G G    L +E+I +F  +F +++ + DS++    G V + I     +G L  ++        Y GA +NPAR  GPA++ G   W+ HW++W GP I A +A ALY  V
Sbjct:   23 MVAFKGVWTQAFWKAVTAEFL--AMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSV-----VGGLGVTTV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSVALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGAVLAGALYEYV 251          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 2.539e-21
Identity = 77/255 (30.20%), Postives = 121/255 (47.45%), Query Frame = 1
Query:  127 ILGFEDIFSVKVWRASMAELLGTAVLVFAL----DTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKV 876
            ++ F+ +++   W+A  AE L  A+L+F L     TI     +       +++S                ISGGHINP V+ A   T   S +++  YI AQC+G I GA  L  V    +     +GG  +  V     G +  G G    L +E+I +F  +F +++ + DS++    G + + I I   +G L  ++        Y GA +NPAR  GPA++ G   W+ HW++W GP I A +A  LY  V
Sbjct:   23 MVAFKGVWTQTFWKAVTAEFL--AMLIFVLLSLGSTINWGGAEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPPSV-----VGGLGVTTV----HGNLSAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGISVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGAVLAGGLYEYV 251          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 3.315e-21
Identity = 77/255 (30.20%), Postives = 121/255 (47.45%), Query Frame = 1
Query:  127 ILGFEDIFSVKVWRASMAELLGTAVLVFAL----DTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKV 876
            ++ F+ +++   W+A  AE L  A+L+F L     TI     +       +++S                ISGGHINP V+ A   T   S +++  YI AQC+G I GA  L  V    +     +GG  +  V     G +  G G    L +E+I +F  +F +++ + DS++    G + + I     +G L  ++        Y GA +NPAR  GPA++ G   W+ HW++W GP I A +A ALY  V
Sbjct:   26 MVAFKGVWTQAFWKAVTAEFL--AMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNV-----VGGLGVTTV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGAVLAGALYEYV 254          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 4.330e-21
Identity = 80/255 (31.37%), Postives = 118/255 (46.27%), Query Frame = 1
Query:  142 DIFSVKVW---RASMAELLGTAVLVFALDTIVI-----SSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            D+  +++W   RA +AE + T + ++     VI     SS         L ++                ISGGHINP V+F   L    S  RA +YI+AQC+GGI G   +K +    + H ++  G        G   +V  G  T  AL  EII +FV ++ +V+ A D ++      V V   +   +G  VF+    T      G G+NPAR +G A++      WD HW+FWAGP I  +A A Y + I
Sbjct:   27 DVGELRLWSFYRALIAEFIATLLFLYITVATVIGYKVQSSADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGI----MKHQYNANG--------GGANMVASGYSTGTALGAEIIGTFVLVY-TVFSATDPKRNARDSHVPVLAPL--PIGFAVFMVHLATIP--ITGTGINPARSIGAAVIYNQKKAWDDHWIFWAGPFIGALAAAAYHQYI 264          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 7.386e-21
Identity = 90/298 (30.20%), Postives = 127/298 (42.62%), Query Frame = 1
Query:   49 QPFATPKQEQRLMDEEKKQNPSTWKKILGFE--DIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFP-------ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVV----------TNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVT-VCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            QP  T  Q  +   + K+  P+ +     FE  ++ S   WRA +AE + T + ++    I + ++    ++PN+  S              F        ISGGHINP V+F   L    S +RA  YI+ QC+G I GA  +K              N +AH ++ G                 GLG       EII +FV     V+  F +  AK   R + V I+    +G  VF+    T      G G+NPAR LG A++    H WD HWVFW GP I     ALY  V+
Sbjct:   19 QPIGTSAQSDK---DYKEPPPAPF-----FEPGELSSWSFWRAGIAEFIATFLFLY----ITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGS----------------GLGA------EIIGTFVL----VYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP--ITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVV 276          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 7.386e-21
Identity = 90/298 (30.20%), Postives = 127/298 (42.62%), Query Frame = 1
Query:   49 QPFATPKQEQRLMDEEKKQNPSTWKKILGFE--DIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFP-------ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVV----------TNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVT-VCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            QP  T  Q  +   + K+  P+ +     FE  ++ S   WRA +AE + T + ++    I + ++    ++PN+  S              F        ISGGHINP V+F   L    S +RA  YI+ QC+G I GA  +K              N +AH ++ G                 GLG       EII +FV     V+  F +  AK   R + V I+    +G  VF+    T      G G+NPAR LG A++    H WD HWVFW GP I     ALY  V+
Sbjct:   19 QPIGTSAQSDK---DYKEPPPAPF-----FEPGELSSWSFWRAGIAEFIATFLFLY----ITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGS----------------GLGA------EIIGTFVL----VYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP--ITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVV 276          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 7.386e-21
Identity = 76/255 (29.80%), Postives = 121/255 (47.45%), Query Frame = 1
Query:  127 ILGFEDIFSVKVWRASMAELLGTAVLVFAL----DTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKV 876
            ++ F+ +++   W+A  AE L  A+L+F L     TI     +       +++S                ISGGHINP V+ A   T   S +++  YI AQC+G I GA  L  V    +     +GG  + +V     G +  G G    L +E+I +F  +F +++ + DS++    G + + I     +G L  ++        Y GA +NPAR  GPA++ G   W+ HW++W GP I A +A  LY  V
Sbjct:   23 MVAFKGVWTQAFWKAVTAEFL--AMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSV-----VGGLGVTMV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGAVLAGGLYEYV 251          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 9.646e-21
Identity = 74/253 (29.25%), Postives = 118/253 (46.64%), Query Frame = 1
Query:  127 ILGFEDIFSVKVWRASMAELLGTAVLVF--ALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKV 876
            ++ F+ +++   W+A  AE L T + V      TI     +       +++S                ISGGHINP V+ A   T   S +++  YI+AQC+G I GA  L  V    +     +GG  +  V     G +  G G    L +E+I +F  +F +++ + DS++    G + + I     +G L  ++        Y GA +NPAR  GPA++ G   W  HW++W GP + A +A ALY  V
Sbjct:   23 MVAFKGVWTQAFWKAVSAEFLATLIFVLLGVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSV-----VGGLGVTTV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WANHWIYWVGPIMGAVLAGALYEYV 251          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.260e-20
Identity = 76/255 (29.80%), Postives = 120/255 (47.06%), Query Frame = 1
Query:  127 ILGFEDIFSVKVWRASMAELLGTAVLVFAL----DTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFPISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVVTNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVTVCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALVRGGHLWDRHWVFWAGPAI-ACVAFALYTKV 876
            ++ F+ +++   W+A  AE L  A+L+F L     TI     +       +++S                ISGGHINP V+ A   T   S +++  YI AQC+G I GA  L  V    +     +GG  +  V     G +  G G    L +E+I +F  +F +++ + DS++    G + + I     +G L  ++        Y GA +NPAR  GPA++ G   W+ HW++W GP I A +A  LY  V
Sbjct:   23 MVAFKGVWTQAFWKAVTAEFL--AMLIFVLLSLGSTINWGGKENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSV-----VGGLGVTTV----HGNLTAGHG----LLVELIITFQLVF-TIFASCDSKRTDVTGSIALAIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGAVLAGGLYEYV 251          
BLAST of DY262747 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.645e-20
Identity = 88/296 (29.73%), Postives = 125/296 (42.23%), Query Frame = 1
Query:   49 QPFATPKQEQRLMDEEKKQNPSTWKKILGFEDIFSVKVWRASMAELLGTAVLVFALDTIVISSIQTDTKTPNLVMSXXXXXXXXXXXXXXFP-------ISGGHINPLVSFAAALTGIASFSRAAIYILAQCVGGIFGALALKAVV----------TNKIAHNFSLGGCTLNVVVPGPDGLVEIGLGTRQALWLEIICSFVFLFASVWMAFDSRQAKALGRVT-VCIVIGTVLGLLVFVSTTVTAQKGYAGAGLNPARCLGPALV-RGGHLWDRHWVFWAGPAIACVAFALYTKVI 879
            QP  T  Q     D++ K+ P     +    ++ S   WRA +AE + T + ++    I + ++    ++PN+  S              F        ISGGHINP V+F   L    S +RA  YI+ QC+G I GA  +K              N IAH ++ G                 GLG       EII +FV     V+  F +  AK   R + V I+    +G  VF+    T      G G+NPAR LG A++    + WD HWVFW GP I     ALY  ++
Sbjct:   19 QPIGTSAQS----DKDYKEPPPA--PLFEPGELASWSFWRAGIAEFIATFLFLY----ITVLTVMGVKRSPNMCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTIAHGYTKGS----------------GLGA------EIIGTFVL----VYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIP--ITGTGINPARSLGAAIIFNKDNAWDDHWVFWVGPFIGAALAALYHVIV 276          
The following BLAST results are available for this feature:
BLAST of DY262747 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 136
Match NameE-valueIdentityDescription
AQP4_RAT2.539e-2130.59Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1[more]
AQP4_BOVIN2.539e-2130.20Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3[more]
AQP4_NOTAL3.315e-2130.20Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1[more]
PIP26_ORYSJ4.330e-2131.37Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP11_VICFA7.386e-2130.20Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH7.386e-2130.20Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
AQP4_HUMAN7.386e-2129.80Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2[more]
AQP4_MOUSE9.646e-2129.25Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2[more]
AQP4_DIPME1.260e-2029.80Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=... [more]
PIP12_ARATH1.645e-2029.73Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA100DD02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262747 ID=DY262747; Name=DY262747; organism=Citrus clementina; type=EST; length=1028bp
TCGGAACTGGCCGGTGATATAGAGGGTGAATATGGTGGTAACAGAGTCCA
GCCTTTTGCTACACCAAAGCAAGAGCAGAGACTGATGGATGAAGAGAAGA
AACAGAATCCCTCCACATGGAAAAAGATTTTGGGATTTGAAGACATTTTT
TCTGTGAAAGTGTGGAGAGCATCAATGGCTGAGCTGCTTGGTACAGCAGT
GCTGGTTTTTGCACTGGACACAATTGTCATTTCCTCCATTCAAACAGACA
CAAAGACCCCAAATCTTGTAATGTCAACTTTGGTCGCAATCACAATAACA
ATCCTCCTACTTGCAACTTTTCCAATTTCTGGTGGCCACATCAACCCATT
AGTGTCCTTTGCTGCAGCACTCACTGGCATCGCGTCCTTCTCAAGGGCAG
CCATATACATTTTGGCTCAATGTGTTGGTGGCATTTTCGGTGCACTAGCG
CTGAAAGCTGTGGTGACCAACAAAATTGCACATAATTTTTCACTTGGAGG
CTGCACCCTGAATGTTGTGGTACCTGGGCCAGATGGGCTTGTTGAGATCG
GCTTGGGGACTAGGCAGGCCCTTTGGCTTGAGATAATTTGCTCGTTTGTG
TTCCTTTTTGCTTCTGTGTGGATGGCTTTTGACTCCAGACAAGCCAAGGC
TCTTGGCAGAGTTACCGTATGCATTGTCATTGGAACAGTGTTGGGTCTTC
TGGTTTTTGTCTCGACAACTGTTACTGCTCAAAAGGGCTATGCCGGAGCT
GGGCTCAACCCGGCAAGATGTTTGGGCCCAGCACTCGTTAGAGGAGGCCA
TCTCTGGGATCGCCACTGGGTTTTCTGGGCCGGGCCGGCTATCGCTTGCG
TGGCATTTGCTTTGTACACTAAGGTCATTCCAAGTCAGAATTTGCACACC
ATCAAGTGATGTAGCTTGAAATTCAATCACCCTTTATTGGCTTCTTAGGA
TTAATTTGAAGGTGTTTCATGTTTTTANGGGATTAAAAAAGTGAAATATC
TATTGAAAATTATATTTTATTGTCTAAT
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