DY262759

Overview
NameDY262759
Unique NameDY262759
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1211
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262759 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 2.349e-56
Identity = 129/325 (39.69%), Postives = 175/325 (53.85%), Query Frame = -3
Query:   19 SENGTTSPAKPAIPWTTRLALTFVSAIGDSGRRPDGTINRRLMNFLDVKSRXXXXXXXXXXXXXXXXXXSRPLWFRLFTPTDS--TPSL------------PVLIFFHGGGFTYLSAASKSYDAVCRRFARKFPAFVVSVNYRLCPEHRYPSQYDDGFDVLRFLDDHRDSVLPPNADLS-RCFLAGDSAGANLAHHVALRASGSPFRFVKLLGLVSIQPFFGGEERTESEIRLSGSPLVSTARTDWIWKAFLPDGSNRDHEASNVSGPNAVDVSGLEYPDTVVVVGGFDPLQDWQRRYYEWLKKSGKEATLIEYPNMIHAFYVFP 948
            SE      +K  +P  T + ++      +  RRPDGT NR L  FLD K                       L  R++ P D+  +PS+            PV++FFHGG F + SA S  YD +CRR      A VVSVNYR  PE+RYP  YDDG+ VL++++    S L    D   R FLAGDS+G N+ H+VA+RA  S    + +LG + + P FGG ERTESE RL G   V+    DW W+AFLP+G +R+H A +  GP +  + GL +P ++VVV G D +QDWQ +Y E LKK+G+E  L+        FY+ P
Sbjct:    4 SEEVNLIESKTVVPLNTWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNS--SSWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVESR---IDVLGNILLNPMFGGTERTESEKRLDGKYFVTVRDRDWYWRAFLPEGEDREHPACSPFGPRSKSLEGLSFPKSLVVVAGLDLIQDWQLKYAEGLKKAGQEVKLLYLEQATIGFYLLP 323          
BLAST of DY262759 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 2.275e-51
Identity = 120/319 (37.62%), Postives = 163/319 (51.10%), Query Frame = -3
Query:   19 AKPAIPWTTRLALTFVSAIGDSGRRPDGTINRRLMNFLDVKSRXXXXXXXXXXXXXXXXXXSRPLWFRLFTPT----DSTPSL------------PVLIFFHGGGFTYLSAASKSYDAVCRRFARKFPAFVVSVNYRLCPEHRYPSQYDDGFDVLRFLDDHRDSVLPPNADLS-RCFLAGDSAGANLAHHVALRASGSPFRFVKLLGLVSIQPFFGGEERTESEIRLSGSPLVSTARTDWIWKAFLPDGSNRDHEASNVSGPNAVDVSGLEYPDTVVVVGGFDPLQDWQRRYYEWLKKSGKEATLIEYPNMIHAFYVFP 924
            ++  +P  T + ++      +  RRPDGT NR L  +LD K                       L  R++ P     +  PS+            PV++FFHGG F + SA S  YD +CRR        VVSVNYR  PE+ YP  YDDG+  L +++    S L    D     FLAGDS+G N+AH+VALRA  S    + +LG + + P FGG ERTESE  L G   V+    DW WKAFLP+G +R+H A N   P    + G+ +P ++VVV G D ++DWQ  Y E LKK+G+E  L+        FY+ P
Sbjct:   12 SRTVVPLNTWVLISNFKVAYNILRRPDGTFNRHLAEYLDRKVTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSR--SWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESG---IDVLGNILLNPMFGGNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQEVKLMHLEKATVGFYLLP 325          
BLAST of DY262759 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 2.972e-51
Identity = 119/301 (39.53%), Postives = 155/301 (51.50%), Query Frame = -3
Query:   19 RRPDGTINRRLMNFLDVKSRXXXXXXXXXXXXXXXXXXSRPLW----------------FRLFTPTDSTPSLPVLIFFHGGGFTYLSAASKSYDAVCRRFARKFPAFVVSVNYRLCPEHRYPSQYDDGFDVLRF------LDDHRDSVLPPNADLSRCFLAGDSAGANLAHHVALRASGSPFRFVKLLGLVSIQPFFGGEERTESEIRLSGSPLVSTARTDWIWKAFLPDGSNRDHEASNVSGPNAVDVSGLEYPDTVVVVGGFDPLQDWQRRYYEWLKKSGKEATLIEYPNMIHAFYVFP 855
            RRPDG+ NR L  FLD K                    +  L                   L  P  +T  +PVLIFFHGG FT+ SA S  YD  CRR        VVSV+YR  PEHRYP  YDDG++ L +      L   +DS +         +LAGDS+G N+AH+VA+RA+      VK+LG + + P FGG+ERT+SE  L G   V+    DW W+A+LP+G +RDH A N  GP    + G+ +P ++VVV G D +QDWQ  Y + LKK+G E  L+        FY  P
Sbjct:   35 RRPDGSFNRDLAEFLDRKVPANSFPLDGVFSFDHVDSTTNLLTRIYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRVWLQSGKDSNV-------YVYLAGDSSGGNIAHNVAVRATNEG---VKVLGNILLHPMFGGQERTQSEKTLDGKYFVTIQDRDWYWRAYLPEGEDRDHPACNPFGPRGQSLKGVNFPKSLVVVAGLDLVQDWQLAYVDGLKKTGLEVNLLYLKQATIGFYFLP 325          
BLAST of DY262759 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 1.526e-47
Identity = 100/240 (41.67%), Postives = 140/240 (58.33%), Query Frame = -3
Query:   19 RPLWFRLFTPTDSTPSLPVLIFFHGGGFTYLSAASKSYDAVCRRFARKFPAFVVSVNYRLCPEHRYPSQYDDGFDVLRFLDDHRDSVLPPNADLSRCFLAGDSAGANLAHHVALRASGSPFRFVKLLGLVSIQPFFGGEERTESEIRLSGSPLVSTARTDWIWKAFLPDGSNRDHEASNVSGPNAVDVSGLEYPDTVVVVGGFDPLQDWQRRYYEWLKKSGKEATLIEYPNMIHAFYVFP 738
            RP+     T   +    PV+IFFHGG F + SA+S  YD++CRRF +     VVSVNYR  PEHRYP  YDDG+  L+++          +A  +R FL+GDS+G N+AHHVA+RA+      VK+ G + +   FGG ERTESE RL G   V+    DW WKA+LP+ ++RDH A N  GPN   + GL +  ++++V G D   D Q  Y + L++ G    +++  N    FY+ P
Sbjct:   98 RPI-LEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRSGGDAQ-ARVFLSGDSSGGNIAHHVAVRAADEG---VKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALREDGHHVKVVQCENATVGFYLLP 332          
BLAST of DY262759 vs. ExPASy Swiss-Prot
Match: AAAD_RABIT (Arylacetamide deacetylase OS=Oryctolagus cuniculus GN=AADAC PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 9.346e-13
Identity = 46/122 (37.70%), Postives = 68/122 (55.74%), Query Frame = -3
Query:  361 RLFTPTDSTPSLPVLIFF-HGGGFTYLSAASKSYDAVCRRFARKFPAFVVSVNYRLCPEHRYPSQYDDGFDVLRFLDDHRDSVLPPNADLSRCFLAGDSAGANLAHHVALRASGSPFRFVKL 723
            R++ P   + +L   +F+ HGGG+   SAA   YD + RR A +    VVS NYRL PE+ +P Q++D +D L++    +D +     D  R  ++GDSAG NLA  VA +    P   +KL
Sbjct:   91 RVYVPKRKSKTLRRGLFYIHGGGWCVGSAALSGYDLLSRRTADRLDVVVVSTNYRLAPEYHFPIQFEDVYDALKWF-LRQDVLEKYGVDPERVGVSGDSAGGNLAAAVAQQLIKDPDVKIKL 211          
BLAST of DY262759 vs. ExPASy Swiss-Prot
Match: AAAD_BOVIN (Arylacetamide deacetylase OS=Bos taurus GN=AADAC PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 6.058e-12
Identity = 48/131 (36.64%), Postives = 70/131 (53.44%), Query Frame = -3
Query:  337 RLFTPTDSTPSLPVLIFF-HGGGFTYLSAASKSYDAVCRRFARKFPAFVVSVNYRLCPEHRYPSQYDDGFDVLR-FLDDHRDSVLPPNADLSRCFLAGDSAGANLAHHVALRASGSPFRFVKLLGLVSIQP 723
            R++ P   T SL   +F+ HGGG+ + S    SYD + R  A +  A V+S NYRL P++ +P Q++D +  L+ FLD    ++     D  R  ++GDSAG NLA  VA +    P   +KL     I P
Sbjct:   92 RIYVPQQKTKSLRRGLFYIHGGGWCFGSNDYYSYDLLSRWTAERLDAVVISTNYRLAPKYHFPVQFEDVYTALKWFLDP--QNLESYGVDPGRIGISGDSAGGNLAAAVAQQLLEDPDVKIKLKVQTLIYP 220          
BLAST of DY262759 vs. ExPASy Swiss-Prot
Match: YR526_MIMIV (Putative alpha/beta hydrolase R526 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R526 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 7.912e-12
Identity = 58/239 (24.27%), Postives = 98/239 (41.00%), Query Frame = -3
Query:   13 LFTPTDSTPSLPVLIFFHGGGFTYLSAASKSYDAVCRRFARKFPAFVVSVNYRLCPEHRYPSQYDDGFDVLRFLDDHRDSVLPPNADLSRCFLAGDSAGANLAHHVAL---RASGSPFRFVKLLGLVSIQPFFGGEERTESEIRLSGSPLVSTARTDWIWKAFLPDGSNRDHEASNVSGPNAVDVSGLEYPDTVVVVGGFDPLQDWQRRYYEWLKKSGKEATLIEYPNMIHAFYVFPEL 720
            +  P  +   LPV+ + HG G  ++    +++         K    V+ VNY L PE ++P+Q  + +D L +   +       N D +   + GDS G N+A  +A+     +G  F++  LL      P       T+S       P +S    +W ++ +     N++    ++S  NA D S    P T++VV   D L+D    Y   L   G     +     IH F +   L
Sbjct:   94 IIRPKGNRDRLPVVFYVHGAG--WVMGGLQTHGRFVSEIVNKANVTVIFVNYSLAPEKKFPTQIVECYDALVYFYSNAQRY---NLDFNNIIVVGDSVGGNMATVLAMLTREKTGPRFKYQILL-----YPVISAAMNTQSYQTFENGPWLSKKSMEWFYEQYTE--PNQNLMIPSISPINATDRSIQYLPPTLLVVDENDVLRDEGEAYAHRLSNLGVPTKSVRVLGTIHDFMLLNPL 320          
BLAST of DY262759 vs. ExPASy Swiss-Prot
Match: YFZ3_SCHPO (AB hydrolase superfamily protein C1039.03 OS=Schizosaccharomyces pombe GN=SPAC1039.03 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.033e-11
Identity = 61/236 (25.85%), Postives = 108/236 (45.76%), Query Frame = -3
Query:   37 RLFTPTDSTPS--LPVLIFFHGGGFTYLSAASKSYDAVCRRFARKFPAFVVSVNYRLCPEHRYPSQYDDGFDVLRFLDDHRDSV-LPPNADLSRCFLAGDSAGANLAHHVALRASGSPFRFVKLLGLVSIQPFFGGEERTESEIR---LSGSPLVSTARTDWIWKAFLPDGSN-RDHEASNVSGPNAVDVSGLEYPDTVVVVGGFDPLQDWQRRYYEWLKKSGKEATLIEYPNMIH 723
            R+F P  + P    P  ++FHGGG+   +  +++  A       +    VV+V+YRL PE  +P+  DDG++ L +  ++ D++ + PN    +  + G SAG N+A  ++ + + SP  F  L+  + + P        ++         +P +  A+  W  + +LP+  +  + EAS    P   D S       ++   G D L      Y E L K+G E+T+  Y    H
Sbjct:   87 RIFRPHGTAPEGGWPCFLWFHGGGWVLGNINTENSFAT--HMCEQAKCVVVNVDYRLAPEDPFPACIDDGWEALLYCYENADTLGINPN----KIAVGGSSAGGNIAAVLSHKVAASPANFPPLVLQLLVVPVCDNTANAKTHKSWELFENTPQLPAAKMMWYRRHYLPNEKDWSNPEASPFFYP---DSSFKNVCPALICAAGCDVLSSEAIAYNEKLTKAGVESTIKIYEGCPH 313          
BLAST of DY262759 vs. ExPASy Swiss-Prot
Match: ADCL2_HUMAN (Arylacetamide deacetylase-like 2 OS=Homo sapiens GN=AADACL2 PE=2 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 1.033e-11
Identity = 40/106 (37.74%), Postives = 62/106 (58.49%), Query Frame = -3
Query:  412 RLFTPT-DSTPSLPVLIFFHGGGFTYLSAASKSYDAVCRRFARKFPAFVVSVNYRLCPEHRYPSQYDDGFDVLRFLDDHRDSVLPP-NADLSRCFLAGDSAGANLA 723
            RL+ P   S      +I+FHGGGF + S+  +++D + R  A    A VV V+YRL P+H +P+Q++DG   ++F     + +L     D +R  +AGDS+G NLA
Sbjct:   92 RLYLPKRKSETRRRAVIYFHGGGFCFGSSKQRAFDFLNRWTANTLDAVVVGVDYRLAPQHHFPAQFEDGLAAVKFF--LLEKILTKYGVDPTRICIAGDSSGGNLA 195          
BLAST of DY262759 vs. ExPASy Swiss-Prot
Match: AAAD_MOUSE (Arylacetamide deacetylase OS=Mus musculus GN=Aadac PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 6.698e-11
Identity = 46/116 (39.66%), Postives = 61/116 (52.59%), Query Frame = -3
Query:  337 LIFFHGGGFTYLSAASKSYDAVCRRFARKFPAFVVSVNYRLCPEHRYPSQYDDGFDVLR-FLDDHRDSVLPPNADLSRCFLAGDSAGANLAHHVALRASGSPFRFVKLLGLVSIQP 681
            L + HGGG+   SAA  SYD + R  A K  A VVS +Y L P+H +P Q++D +  LR FL +  D +     D  R  ++GDSAG NLA  V  +    P   +KL     I P
Sbjct:  106 LFYIHGGGWCLGSAAHFSYDTLSRWTAHKLDAVVVSTDYGLAPKHHFPRQFEDVYRSLRWFLQE--DVLEKYGVDPRRVGVSGDSAGGNLAAAVTQQLIQDPDVKIKLKVQALIYP 219          
The following BLAST results are available for this feature:
BLAST of DY262759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
GI1L3_ARATH2.349e-5639.69Probable gibberellin receptor GID1L3 OS=Arabidopsi... [more]
GI1L1_ARATH2.275e-5137.62Probable gibberellin receptor GID1L1 OS=Arabidopsi... [more]
GI1L2_ARATH2.972e-5139.53Probable gibberellin receptor GID1L2 OS=Arabidopsi... [more]
GID1_ORYSJ1.526e-4741.67Gibberellin receptor GID1 OS=Oryza sativa subsp. j... [more]
AAAD_RABIT9.346e-1337.70Arylacetamide deacetylase OS=Oryctolagus cuniculus... [more]
AAAD_BOVIN6.058e-1236.64Arylacetamide deacetylase OS=Bos taurus GN=AADAC P... [more]
YR526_MIMIV7.912e-1224.27Putative alpha/beta hydrolase R526 OS=Acanthamoeba... [more]
YFZ3_SCHPO1.033e-1125.85AB hydrolase superfamily protein C1039.03 OS=Schiz... [more]
ADCL2_HUMAN1.033e-1137.74Arylacetamide deacetylase-like 2 OS=Homo sapiens G... [more]
AAAD_MOUSE6.698e-1139.66Arylacetamide deacetylase OS=Mus musculus GN=Aadac... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA100DE02RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262759 ID=DY262759; Name=DY262759; organism=Citrus clementina; type=EST; length=1211bp
AGAAGCCTCGGGCAATTCCGGAAAAACATAAAACGCATGGATCATGTTTG
GATACTCGATCAGTGTTGCTTCTTTTCCTGATTTTTTCAACCACTCGTAA
TATCTTCTTTGCCAATCCTGCAACGGGTCGAACCCCCCCACCACCACAAC
CGTGTCCGGATATTCCAAGCCCGAAACATCCACCGCGTTGGGCCCACTCA
CGTTCGATGCTTCGTGGTCTCGATTTGACCCGTCTGGCAAAAACGCCTTC
CATATCCAGTCGGTTCGGGCCGTGGAGACCAAAGGCGACCCGGATAATCG
GATCTCCGACTCGGTTCTCTCCTCGCCGCCGAAGAAGGGTTGGATCGAAA
CCAACCCCAGAAGTTTGACGAACCGAAATGGAGACCCAGAAGCCCGAAGT
GCCACGTGGTGGGCCAAGTTGGCACCCGCACTGTCGCCCGCTAAGAAGCA
CCTAGACAAGTCGGCATTGGGTGGTAACACGGAATCGCGATGGTCGTCGA
GGAATCTCAGAACGTCGAACCCGTCGTCGTATTGTGAAGGGTAACGATGT
TCGGGACAGAGACGGTAGTTTACGGACACGACAAAAGCGGGGAATTTGCG
GGCGAAACGACGGCAAACGGCGTCGTAGGATTTGGAAGCGGCGCTGAGGT
AAGTGAAGCCACCTCCGTGGAAGAAAATGAGGACGGGAAGGGAAGGGGTG
GAATCGGTGGGGGTGAAGAGACGGAACCAGAGTGGGCGGGAGGGGTCGAC
GGTGACGTCAGATGTGGAAACGGAGTTGACGGGGTTGGGATTAGGACGGC
TCTTGACGTCCAGGAAGTTCATGAGACGACGGTTGATGGTGCCGTCAGGG
CGACGGCCGGAGTCGCCGATGGCGGAGACGAAGGTCAGAGCAAGTCTGGT
TGTCCATGGGATAGCCGGTTTTGCGGGACTGGTGGTTCCATTCTCGGAGG
GAACCAAATGATGATAAAGGTTAAAATAAAGGGGGGGGGGGGAATTTGTT
CTTTTATTTCAAAAAATTTAATAAAAGTGCAATTGTTTCGGGTGGGAATA
ACCCAAAATGAAAAAAAGAAAAAAAAAAAAAAAATGGTTACTGGTGGGGG
GTTGGAAATCCCCTTCCCTTAACTAATTTTATCTCTAAACCTGAAACCCC
AATTTTTTAAAAAAAGGGGGGGGAGGAGCGCAAAATTTTTTTTGGGCCTA
TTTTTTTTTTT
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