DY262765

Overview
NameDY262765
Unique NameDY262765
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1245
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262765 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.963e-48
Identity = 118/311 (37.94%), Postives = 166/311 (53.38%), Query Frame = 3
Query:   30 KSLTAFAESAVRVPPRNRSRGRANGGF---SSSVISGLAQGSGEYFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTDPVFDPAKSRSFATVPCRSPLCRKLDSSGCNRRNTCLYQVSYGDGSITVGDFSTETLTFRGTRVARVALGCGHDNEGLFV-XXXXXXXXXXXXXSFPTQTGRRFNRKFSYCLVDRSTSAKPSSMVFGDSA--VSRTARFTPLLANPKLDTFYYVELVGISVGGAHVRGITASLFKLDPAGNGGVIIDSGTSVTRLTRPAYIALRDAFRAGASSLKRAPDFSLFDTCFE 944
            K+LT + E   R   R   R R+       SS + + +  G GEY   + +GTP      ++DTGSD++W QC PC +C+SQ  P+F+P  S SF+T+PC S  C+ L S  CN  N C Y   YGDGS T G  +TET TF  + V  +A GCG DN+G                 S P+Q G     +FSYC+    +S+ PS++  G +A  V   +  T L+ +    T+YY+ L GI+VGG ++ GI +S F+L   G GG+IIDSGT++T L + AY A+  AF    +        S   TCF+
Sbjct:   53 KNLTKY-ELIKRAIKRGERRMRSINAMLQSSSGIETPVYAGDGEYLMNVAIGTPDSSFSAIMDTGSDLIWTQCEPCTQCFSQPTPIFNPQDSSSFSTLPCESQYCQDLPSETCN-NNECQYTYGYGDGSTTQGYMATETFTFETSSVPNIAFGCGEDNQGFGQGNGAGLIGMGWGPLSLPSQLG---VGQFSYCMTSYGSSS-PSTLALGSAASGVPEGSPSTTLIHSSLNPTYYYITLQGITVGGDNL-GIPSSTFQLQDDGTGGMIIDSGTTLTYLPQDAYNAVAQAFTDQINLPTVDESSSGLSTCFQ 356          

HSP 2 Score: 21.9422 bits (45), Expect = 1.963e-48
Identity = 9/22 (40.91%), Postives = 14/22 (63.64%), Query Frame = 1
Query:  967 KVPTVVLQFKGGKVSLPGNNYL 1032
            +VP + +QF GG ++L   N L
Sbjct:  365 QVPEISMQFDGGVLNLGEQNIL 386          
BLAST of DY262765 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 2.559e-48
Identity = 117/311 (37.62%), Postives = 163/311 (52.41%), Query Frame = 3
Query:   30 KSLTAFA--ESAVRVPPRNRSRGRANGGFSSSVISGLAQGSGEYFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTDPVFDPAKSRSFATVPCRSPLCRKLDSSGCNRRNTCLYQVSYGDGSITVGDFSTETLTFRGTRVARVALGCGHDNEGLFV-XXXXXXXXXXXXXSFPTQTGRRFNRKFSYCLVDRSTSAKPSSMVFGDSAVSRTARF--TPLLANPKLDTFYYVELVGISVGGAHVRGITASLFKLDP-AGNGGVIIDSGTSVTRLTRPAYIALRDAFRAGASSLKRAPDFSLFDTCFE 944
            K+LT F   E A+    R   R  A     S V + +  G GEY   L +GTP +    ++DTGSD++W QC PC +C++Q+ P+F+P  S SF+T+PC S LC+ L S  C+  N C Y   YGDGS T G   TETLTF    +  +  GCG +N+G                 S P+Q       KFSYC+    +S  PS+++ G  A S TA    T L+ + ++ TFYY+ L G+SVG   +  I  S F L+   G GG+IIDSGT++T     AY ++R  F +  +        S FD CF+
Sbjct:   52 KNLTKFQLLERAIERGSRRLQRLEAMLNGPSGVETSVYAGDGEYLMNLSIGTPAQPFSAIMDTGSDLIWTQCQPCTQCFNQSTPIFNPQGSSSFSTLPCSSQLCQALSSPTCS-NNFCQYTYGYGDGSETQGSMGTETLTFGSVSIPNITFGCGENNQGFGQGNGAGLVGMGRGPLSLPSQLD---VTKFSYCMTPIGSST-PSNLLLGSLANSVTAGSPNTTLIQSSQIPTFYYITLNGLSVGSTRL-PIDPSAFALNSNNGTGGIIIDSGTTLTYFVNNAYQSVRQEFISQINLPVVNGSSSGFDLCFQ 356          

HSP 2 Score: 28.4906 bits (62), Expect = 2.559e-48
Identity = 10/21 (47.62%), Postives = 14/21 (66.67%), Query Frame = 1
Query:  967 KVPTVVLQFKGGKVSLPGNNY 1029
            ++PT V+ F GG + LP  NY
Sbjct:  365 QIPTFVMHFDGGDLELPSENY 385          
BLAST of DY262765 vs. ExPASy Swiss-Prot
Match: ASPL2_ARATH (Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 9.946e-18
Identity = 73/267 (27.34%), Postives = 111/267 (41.57%), Query Frame = 3
Query:  147 GEYFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTD-----PVFDPAKSRSFATVPCRSPLCRKL-DSSGCNRRNTCLYQVSYGDGSITVGDFSTETLTFR--------GTRVARVALGCGHDNEGLFVXXXXXXXXXXXXXSFPTQTGRRF------NRKFSYCLVDRSTSAKPSSMVFGDSAVSRTARFTPLLANPKLDTFYYVELVGISVGGAHVRGITASLFKLDPAGNGGVIIDSGTSVTRLTRPAYIALRDAFRA 887
            G YFT++ +G+PP+  ++ +DTGSD++WI C PC KC ++T+      +FD   S +   V C    C  +  S  C     C Y + Y D S + G F  + LT          G     V  GCG D  G                   T    +        R FS+CL     + K   +       S   + TP++ N      Y V L+G+ V G  +  +  S+ +     NGG I+DSGT++    +  Y +L +   A
Sbjct:   72 GLYFTKIKLGSPPKEYHVQVDTGSDILWINCKPCPKCPTKTNLNFRLSLFDMNASSTSKKVGCDDDFCSFISQSDSCQPALGCSYHIVYADESTSDGKFIRDMLTLEQVTGDLKTGPLGQEVVFGCGSDQSGQLGNGDSAVDGVMGFGQSNTSVLSQLAATGDAKRVFSHCL----DNVKGGGIFAVGVVDSPKVKTTPMVPN---QMHYNVMLMGMDVDGTSL-DLPRSIVR-----NGGTIVDSGTTLAYFPKVLYDSLIETILA 325          
BLAST of DY262765 vs. ExPASy Swiss-Prot
Match: NEP2_NEPDI (Aspartic proteinase nepenthesin-2 (Fragments) OS=Nepenthes distillatoria PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 5.286e-11
Identity = 36/89 (40.45%), Postives = 47/89 (52.81%), Query Frame = 3
Query:  219 DVVWIQCAPCKKCYSQTDPVFDPAKSRSFATVPCRSPLCRKLDSSGCNRRNTCLYQVSYGDGSITVGDFSTETLTFRGTRVARVALGCG 485
            D++W QC PC +C+SQ         S SF+T+PC S  C+ L S  C+    C Y   YGDGS T G  + E     G+ V  +A GCG
Sbjct:   20 DLIWTQCEPCTQCFSQ--------DSSSFSTLPCESQYCQDLPSETCD----CQYTYGYGDGSSTQGYMAXED----GSSVPNIAFGCG 92          
The following BLAST results are available for this feature:
BLAST of DY262765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
NEP2_NEPGR1.963e-4837.94Aspartic proteinase nepenthesin-2 OS=Nepenthes gra... [more]
NEP1_NEPGR2.559e-4837.62Aspartic proteinase nepenthesin-1 OS=Nepenthes gra... [more]
ASPL2_ARATH9.946e-1827.34Aspartic proteinase-like protein 2 OS=Arabidopsis ... [more]
NEP2_NEPDI5.286e-1140.45Aspartic proteinase nepenthesin-2 (Fragments) OS=N... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA100DE08RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262765 ID=DY262765; Name=DY262765; organism=Citrus clementina; type=EST; length=1245bp
TCCGCATCCAACGCGACGTCTTACGTGTCAAATCCTTAACCGCCTTCGCT
GAATCTGCCGTTCGTGTTCCCCCGCGCAACCGCTCCCGCGGGCGTGCCAA
CGGAGGCTTTAGTAGCTCCGTCATATCAGGGCTCGCACAAGGCAGCGGCG
AGTACTTCACGCGCCTCGGAGTTGGCACACCCCCTAGGTATGTCTACATG
GTCTTAGACACCGGTAGCGACGTCGTTTGGATACAGTGCGCTCCGTGCAA
GAAATGCTACTCTCAAACCGACCCTGTCTTCGACCCTGCCAAGTCCCGCT
CGTTTGCTACCGTACCCTGTCGGTCCCCTTTGTGCCGCAAGCTCGACTCT
TCTGGCTGTAACCGCAGGAACACGTGTCTTTACCAAGTCTCCTACGGAGA
CGGTTCTATCACCGTCGGTGATTTTTCCACTGAAACGCTGACGTTTCGTG
GCACCAGAGTTGCGCGCGTGGCCCTCGGTTGTGGACACGACAATGAGGGC
CTCTTCGTTGCTGCTGCGGGCTTATTGGGGCTCGGTCGTGGGAGGTTGTC
ATTTCCAACTCAAACCGGTCGCCGGTTCAACCGTAAGTTTTCTTACTGTT
TAGTGGACCGATCCACTTCTGCTAAACCTTCATCGATGGTATTCGGTGAC
TCGGCCGTTTCACGAACCGCCCGGTTCACTCCGTTACTCGCAAACCCTAA
GCTCGACACATTCTACTATGTTGAACTAGTTGGAATCAGCGTCGGCGGTG
CTCATGTCCGCGGCATCACTGCTTCTTTGTTCAAACTCGATCCGGCCGGT
AACGGTGGGGTCATCATAGACTCGGGTACGTCCGTGACCCGTTTGACCCG
ACCCGCTTACATCGCATTGCGTGATGCTTTCCGAGCTGGAGCATCCTCCT
TGAAGCGTGCGCCAGACTTTTCGCTGTTTGATACGTGCTTCGAATGGTCG
GGGAAGACGAAAGTGAAAGGTGCCAACGGTGGTGTTGCAATTCAAAGGTG
GCAAAGTGTCGTTGCCGGGCAATAATTATCTAAAAACCCGGGGAAAATAA
GCGAAAAATTTTGGCTTTAATTTTGAGGAAACCAGGAACGGGGTGTCCTA
TTATTGAAAAAATTCCCCCAAAAGGGGCTTTCCGGGTTTGTTATTAAAAT
TGGGCGCCTTCTCCGGAATATGGGTTTTTTCCCCCCCCCGGGGTGGGCCT
TTGAGGTGTCATATTTGCGCGGGGGGGGGATATTTTTTAAAGAGG
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