DY262848
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY262848 vs. ExPASy Swiss-Prot
Match: CHMP1_DICDI (Charged multivesicular body protein 1 OS=Dictyostelium discoideum GN=chmp1 PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.450e-38 Identity = 81/194 (41.75%), Postives = 131/194 (67.53%), Query Frame = 2 Query: 149 NQIMDLKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIRKRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMANIVKSLESSLATGNLQKMSETMDSFEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVPTKQQEKVDEDDLSRRLAELKAR 730 NQ+ LKFTSK L++Q GNMDGARIYA+N+IR++ + +NYLRLASR+DAV +R++T +M ++ SMANIVKS+E S+ +L+K+++ MD FE+QF +++VQ+ ++E+AM +T+LSTP +V+ L+ QVAD++GL V + + + P+++ ++ + D+L+ RL LK + Sbjct: 3 NQLFQLKFTSKQLEKQSKKSEQSEKAQKIKLKKAIEQGNMDGARIYAQNAIREKNQSLNYLRLASRIDAVASRVETAIRMKSVTGSMANIVKSMEKSMRNMDLEKITQVMDQFERQFEDLDVQSVYVENAMNQTTTLSTPADQVDLLISQVADEHGLNVGMQM-----GSAPSEKVQQGETDELTERLNRLKQK 191
BLAST of DY262848 vs. ExPASy Swiss-Prot
Match: CHM1B_BOVIN (Charged multivesicular body protein 1b OS=Bos taurus GN=CHMP1B PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.149e-35 Identity = 80/200 (40.00%), Postives = 128/200 (64.00%), Query Frame = 2 Query: 125 MGNTEKLLNQIMDLKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIRKRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMANIVKSLESSLATGNLQKMSETMDSFEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVPTKQQEKVDEDDLSRRLAELK 724 M N EK + +LKF +K L R GNM+ ARI+AEN+IR++ + +N+LR+++R+DAV AR+ T M + KSMA +VKS++++L T NL+K+S MD FE QF ++VQ + ME M+ +T+L+TP+G+V+ L+Q++AD+ GL++++ LPQ +V T ++D+LS+RLA L+ Sbjct: 1 MSNMEK---HLFNLKFAAKELGRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQGQVDMLLQEMADEAGLDLNMELPQGQTGSVGT-SVASAEQDELSQRLARLR 196
BLAST of DY262848 vs. ExPASy Swiss-Prot
Match: CHM1B_HUMAN (Charged multivesicular body protein 1b OS=Homo sapiens GN=CHMP1B PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.342e-35 Identity = 79/200 (39.50%), Postives = 127/200 (63.50%), Query Frame = 2 Query: 125 MGNTEKLLNQIMDLKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIRKRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMANIVKSLESSLATGNLQKMSETMDSFEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVPTKQQEKVDEDDLSRRLAELK 724 M N EK + +LKF +K L R GNM+ ARI+AEN+IR++ + +N+LR+++R+DAV AR+ T M + KSMA +VKS++++L T NL+K+S MD FE QF ++VQ + ME M+ +T+L+TP+ +V+ L+Q++AD+ GL++++ LPQ +V T ++D+LS+RLA L+ Sbjct: 1 MSNMEK---HLFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSVGT-SVASAEQDELSQRLARLR 196
BLAST of DY262848 vs. ExPASy Swiss-Prot
Match: CHM1B_DANRE (Charged multivesicular body protein 1b OS=Danio rerio GN=chmp1b PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 5.701e-35 Identity = 77/200 (38.50%), Postives = 130/200 (65.00%), Query Frame = 2 Query: 125 MGNTEKLLNQIMDLKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIRKRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMANIVKSLESSLATGNLQKMSETMDSFEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVPTKQQEKVDEDDLSRRLAELK 724 M + EK + +LKF +K LQR GNM+ ARI+AEN+IR++ + +N+LR+++R+DAV AR+ T M + KSMA +VK ++++L + NL+K+S M+ FE+QF ++VQ ME +M+ +T+L+TP+G+V++LM ++AD+ GL++++ LPQ +V T ++D+LS+RLA+L+ Sbjct: 1 MSSMEK---HLFNLKFAAKELQRNSKKCDKEEKAEKVKVKKAIQKGNMEVARIHAENAIRQKNQSVNFLRMSARVDAVAARVQTAVTMNQVTKSMAGVVKGMDATLKSMNLEKISGLMEKFERQFETLDVQTAQMEDSMSSTTTLTTPQGQVDTLMMEMADEAGLDLNMELPQGQTGSVGT-SVASAEQDELSQRLAKLR 196
BLAST of DY262848 vs. ExPASy Swiss-Prot
Match: CHM1B_CHICK (Charged multivesicular body protein 1b OS=Gallus gallus GN=CHMP1B PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 7.445e-35 Identity = 78/200 (39.00%), Postives = 128/200 (64.00%), Query Frame = 2 Query: 125 MGNTEKLLNQIMDLKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIRKRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMANIVKSLESSLATGNLQKMSETMDSFEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVPTKQQEKVDEDDLSRRLAELK 724 M N EK + +LKF +K L R GNM+ ARI+AEN+IR++ + +N+LR+++R+DAV AR+ T M + KSMA +VKS++++L + NL+K+S MD FE QF ++VQ + ME+ M+ +T+L+TP+ +V+ L+Q++AD+ GL++++ LPQ +V T ++D+LS+RLA L+ Sbjct: 1 MSNMEK---HLFNLKFAAKELNRNSKRCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAINFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKSMNLEKISALMDKFEHQFETLDVQTQQMENTMSNTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSVGT-SVASAEQDELSQRLARLR 196
BLAST of DY262848 vs. ExPASy Swiss-Prot
Match: CH1B1_MOUSE (Charged multivesicular body protein 1b-1 OS=Mus musculus GN=Chmp1b1 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.270e-34 Identity = 78/200 (39.00%), Postives = 127/200 (63.50%), Query Frame = 2 Query: 125 MGNTEKLLNQIMDLKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIRKRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMANIVKSLESSLATGNLQKMSETMDSFEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVPTKQQEKVDEDDLSRRLAELK 724 M N EK + +LKF +K L R GNM+ ARI+AEN+IR++ + +N+LR+++R+DAV AR+ T M + KSMA +VKS++++L + NL+K+S MD FE QF ++VQ + ME M+ +T+L+TP+ +V+ L+Q++AD+ GL++++ LPQ +V T ++D+LS+RLA L+ Sbjct: 1 MSNMEK---HLFNLKFAAKELNRSSKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQGVNFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKSMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSVGT-SVASAEQDELSQRLARLR 196
BLAST of DY262848 vs. ExPASy Swiss-Prot
Match: CH1B2_MOUSE (Charged multivesicular body protein 1b-2 OS=Mus musculus GN=Chmp1b2 PE=2 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.834e-33 Identity = 76/200 (38.00%), Postives = 125/200 (62.50%), Query Frame = 2 Query: 125 MGNTEKLLNQIMDLKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIRKRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMANIVKSLESSLATGNLQKMSETMDSFEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVPTKQQEKVDEDDLSRRLAELK 724 M N EK + +LKF +K L R GN + ARI+AEN+IR++ + +N+LR+++R+DAV AR+ T M + KSMA +VKS++++L + NL+K+S MD FE QF ++VQ + ME M+ +T+L+TP+ +V+ L+Q++AD+ GL++++ LPQ +V ++D+LS+RLA L+ Sbjct: 1 MSNMEK---HLFNLKFAAKELNRNAKKCDKEEKAEKAKIKKAIQKGNTEVARIHAENAIRQKNQAINFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLRSMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSVGA-SVASTEQDELSQRLARLR 196
BLAST of DY262848 vs. ExPASy Swiss-Prot
Match: CHM1B_XENLA (Charged multivesicular body protein 1b OS=Xenopus laevis GN=chmp1b PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 3.128e-33 Identity = 76/200 (38.00%), Postives = 126/200 (63.00%), Query Frame = 2 Query: 125 MGNTEKLLNQIMDLKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIRKRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMANIVKSLESSLATGNLQKMSETMDSFEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVPTKQQEKVDEDDLSRRLAELK 724 M + EK + +LKF +K L R GN + ARI+AEN+IR++ + +N+LR+++R+DAV AR+ T M + KSMA +VKS++++L + NL+K+S MD FE QF ++VQ + ME M+ +T+L+TP+ +V++L+ ++AD+ GL++S+ LPQ +V T ++D+LS+RLA L+ Sbjct: 1 MSSMEK---HLFNLKFAAKELNRNAKKCEKEEKTEKAKIKKAIQKGNTEIARIHAENAIRQKNQGINFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKSMNLEKISALMDKFEHQFETLDVQTQQMEDTMSNTTTLTTPQNQVDNLLHEMADEAGLDLSMELPQGQTGSVGT-SVASTEQDELSQRLARLR 196
BLAST of DY262848 vs. ExPASy Swiss-Prot
Match: CHM1B_XENTR (Charged multivesicular body protein 1b OS=Xenopus tropicalis GN=chmp1b PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 6.969e-33 Identity = 75/200 (37.50%), Postives = 126/200 (63.00%), Query Frame = 2 Query: 125 MGNTEKLLNQIMDLKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIRKRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMANIVKSLESSLATGNLQKMSETMDSFEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVPTKQQEKVDEDDLSRRLAELK 724 M + EK + +LKF +K L R GN + ARI+AEN+IR++ + +N+LR+++R+DAV AR+ T M + KSMA +VKS++++L + NL+K+S MD FE QF ++VQ + ME M+ +T+L+TP+ +V++L+ ++AD+ GL++++ LPQ +V T ++D+LS+RLA L+ Sbjct: 1 MSSMEK---NLFNLKFAAKELHRNAKKCEKEEKTEKAKIKKAIQKGNTEIARIHAENAIRQKNQGINFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDTTLKSMNLEKISALMDKFEHQFETLDVQTQQMEDTMSNTTTLTTPQNQVDNLLHEMADEAGLDLNMELPQGQTGSVGT-SVASTEQDELSQRLARLR 196
BLAST of DY262848 vs. ExPASy Swiss-Prot
Match: CHM1A_PONAB (Charged multivesicular body protein 1a OS=Pongo abelii GN=CHMP1A PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.899e-32 Identity = 74/191 (38.74%), Postives = 118/191 (61.78%), Query Frame = 2 Query: 155 IMDLKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIRKRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMANIVKSLESSLATGNLQKMSETMDSFEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQ-PAAHAVPTKQQEKVDEDDLSRRLAELK 724 + LKFT+K L++ N++ AR+YAEN+IRK+ E +N+LR+ASR+DAV +++ T M + K+MA + K+L+ +L+T +LQK+S MD FE+Q N++V ME +M+ +T+L+TP+ +V+SL+ Q+A++ GLEV L Q P + + + ED LSRRLA L+ Sbjct: 5 LFQLKFTAKQLEKLAKKAEKDSKAEQAKVKKALLQKNVECARVYAENAIRKKNEGVNWLRMASRVDAVASKVQTAVTMKGVTKNMAQVTKALDKALSTMDLQKVSSVMDRFEQQVQNLDVHTSVMEDSMSSATTLTTPQEQVDSLIMQIAEENGLEVLDQLSQLPEGASAVGESSVRSQEDQLSRRLAALR 195 The following BLAST results are available for this feature:
BLAST of DY262848 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >DY262848 ID=DY262848; Name=DY262848; organism=Citrus clementina; type=EST; length=902bpback to top |