DY262855
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY262855 vs. ExPASy Swiss-Prot
Match: IF41_WHEAT (Eukaryotic initiation factor iso-4F subunit p82-34 OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 268.47 bits (685), Expect = 6.502e-71 Identity = 160/307 (52.12%), Postives = 195/307 (63.52%), Query Frame = 2 Query: 278 LPPHGGVASAF-KMGDLRFEGHERVRYTREQLLQLKEVAQLTEDILKIKQEIESEFDGEGQSWGGRAENNNLQSQFQA------RYLEADNRDWRTRSTTSG-----QEKSLEANQEKMEFGAHEGQLNSQFASAQISTNQGA--GPAPALIKAEVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNEKLPPFSSDEAGGKKSPLSG-SFETLPGGIEGAEHPRAEI-------RKRMPRKKNGTYGSRTKG---LAGEL 1123 L PHGG AS ++GDL E ERVRY+R+QLL L+++ +TE IL+++QEIE+E +G+ QSW N LQ+Q Q R+ E DNRDWR R+ +EKS + +E E G+ QF S++Q A GP PALIKA+VPWSARRGNLSEKDRVLKTVKGILNKLTPEKFD+LKGQL+DSGITT DILK VI LIF+KAV EPTFCPMYA LCS+LN+ LP F S+E GGK+ EGA+ R EI ++ R K + RT G L GEL Sbjct: 40 LRPHGGGASGVSRIGDLHSESRERVRYSRDQLLDLRKITDVTEQILRLQQEIEAELNGDDQSWVRNDSNVQLQTQAQPQVQAQNRFTETDNRDWRARTEKPPAPAVQEEKSWDNIREVKEQYNASGRQQEQFNRQDQSSSQKAQVGPPPALIKADVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDLLKGQLLDSGITTADILKDVISLIFEKAVFEPTFCPMYAQLCSELNDNLPTFPSEEPGGKEITFKRVLLNNCQEAFEGADSLRVEIASLTGPDQEMEKRDKERIFKLRTLGNIRLIGEL 346
BLAST of DY262855 vs. ExPASy Swiss-Prot
Match: C3H43_ORYSJ (Zinc finger CCCH domain-containing protein 43 OS=Oryza sativa subsp. japonica GN=Os06g0520600 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.158e-35 Identity = 90/222 (40.54%), Postives = 131/222 (59.01%), Query Frame = 2 Query: 338 HERVRYTREQLLQLKEVAQLTEDILKIKQEIESEFDGEGQSWGGRAENNNLQSQFQARYLEADNRDWRTRSTTSGQEKSLEAN----QEKMEFGAHEGQLNSQFASAQISTNQG-------AGPAPA-LIKAEVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNEKLPPFSSDE 967 H+R+ YTR+QLLQL + ++ +DILK Q+I E +GE + G AE +++Q+ R+ D+RDW + S + E+ N +E G + + N S+ ++ P + LIKAEVP S +RG +S KD VLKT+K ILN +P+ FD+ KGQLI++ I++ DILK VI LIF+K V EP FC YA LC+ LN+ L PF ++ Sbjct: 235 HQRISYTRDQLLQLCQNVEVPKDILKFCQDINVELNGEDKISGFGAEKDHVQTPSYKRFDATDSRDWHSWSAQTNWEQKFWDNFSEAKEPYSLGWKQEKFNKPDQSSFHFDSKDQWLKFIKCTPCKSTLIKAEVPLSIQRGIISGKDEVLKTLKSILNTFSPKMFDLQKGQLIETRISSADILKDVINLIFEKVVAEPAFCSTYAQLCTYLNQNLTPFPPED 456
BLAST of DY262855 vs. ExPASy Swiss-Prot
Match: IF4G2_RABIT (Eukaryotic translation initiation factor 4 gamma 2 OS=Oryctolagus cuniculus GN=EIF4G2 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.126e-13 Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 710 SARRGNLSEKDR---VLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNEKLPPFSSDEAGGK 979 SA + +EK+R + + V+GILNKLTPEKFD L +L++ G+ + ILKGVI LI DKA+ EP + +YA LC L E P F A G+ Sbjct: 62 SAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPAAEGQ 154
BLAST of DY262855 vs. ExPASy Swiss-Prot
Match: IF4G2_PONAB (Eukaryotic translation initiation factor 4 gamma 2 OS=Pongo abelii GN=EIF4G2 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 2.126e-13 Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 710 SARRGNLSEKDR---VLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNEKLPPFSSDEAGGK 979 SA + +EK+R + + V+GILNKLTPEKFD L +L++ G+ + ILKGVI LI DKA+ EP + +YA LC L E P F A G+ Sbjct: 62 SAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPAAEGQ 154
BLAST of DY262855 vs. ExPASy Swiss-Prot
Match: IF4G2_MOUSE (Eukaryotic translation initiation factor 4 gamma 2 OS=Mus musculus GN=Eif4g2 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 2.126e-13 Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 710 SARRGNLSEKDR---VLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNEKLPPFSSDEAGGK 979 SA + +EK+R + + V+GILNKLTPEKFD L +L++ G+ + ILKGVI LI DKA+ EP + +YA LC L E P F A G+ Sbjct: 62 SAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPAAEGQ 154
BLAST of DY262855 vs. ExPASy Swiss-Prot
Match: IF4G2_HUMAN (Eukaryotic translation initiation factor 4 gamma 2 OS=Homo sapiens GN=EIF4G2 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.126e-13 Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 710 SARRGNLSEKDR---VLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNEKLPPFSSDEAGGK 979 SA + +EK+R + + V+GILNKLTPEKFD L +L++ G+ + ILKGVI LI DKA+ EP + +YA LC L E P F A G+ Sbjct: 62 SAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPAAEGQ 154
BLAST of DY262855 vs. ExPASy Swiss-Prot
Match: IF4G2_BOVIN (Eukaryotic translation initiation factor 4 gamma 2 OS=Bos taurus GN=EIF4G2 PE=2 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 2.126e-13 Identity = 44/93 (47.31%), Postives = 59/93 (63.44%), Query Frame = 2 Query: 710 SARRGNLSEKDR---VLKTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNEKLPPFSSDEAGGK 979 SA + +EK+R + + V+GILNKLTPEKFD L +L++ G+ + ILKGVI LI DKA+ EP + +YA LC L E P F A G+ Sbjct: 62 SAANNSANEKERHDAIFRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRLAEDAPNFDGPAAEGQ 154
BLAST of DY262855 vs. ExPASy Swiss-Prot
Match: IF4G_DICDI (Eukaryotic translation initiation factor 4 gamma OS=Dictyostelium discoideum GN=eif4g PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 8.932e-12 Identity = 65/242 (26.86%), Postives = 108/242 (44.63%), Query Frame = 2 Query: 341 ERVRYTREQLLQLK--EVAQLTEDILKIKQEIES-----EFDGEGQSWGGRAENNNL-----------QSQFQARYLEADNRDWRTRSTTS---GQEKSLEAN------------QEKMEFGAHEGQLNSQFASAQIST---NQGAGPAPALIKA----EVPWSARRGN-LSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITTPD-ILKGVIELIFDKAVLEPTFCPMYALLCSDLNE 940 E++ Y++E ++ LK + + T + +K +IE+ + + G GG +N N+ Q +Y N + ++ + GQ++ + N Q++++ G L Q +T P I + E W + N L + +VL+ ILNK+TPEKFDVL +L++ GI + + KG I+LIFDKA+ E FC MY LC + E Sbjct: 593 EKIVYSKELMMSLKPKSMEEPTGPLKDLKNQIETNTNQNQLNRSGNKIGGNQQNKNMGMGGMNMNPNYPPQMNMKYPPQMNMKYPPKNYNNQVQGQQQQQQGNPNFNKYAPGYQYQQQIQQGMPPPTLQPNPYQPQQATYGITFSRDPVQPSISSQPVNEKRWVPTKVNALDDSQKVLRKANFILNKITPEKFDVLTEELLELGIVDDEKVHKGTIDLIFDKALNESKFCTMYTNLCKKIFE 834
BLAST of DY262855 vs. ExPASy Swiss-Prot
Match: IF4G1_ARATH (Eukaryotic translation initiation factor 4G OS=Arabidopsis thaliana GN=EIF4G PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.790e-11 Identity = 56/179 (31.28%), Postives = 81/179 (45.25%), Query Frame = 2 Query: 674 PAPALIKAEVPWSARRGNLSEKDRVL-KTVKGILNKLTPEKFDVLKGQLIDSGITTPDILKGVIELIFDKAVLEPTFCPMYALLCSDLNEKLPPFS-----------------SDEAGGKKSPLSGSFETLPGGIEGAEHPRAEIRKRMPRKKNGTYGSRTKGLAGELGGKNPFMGEIL 1156 P + KAE + G ++++++ + +K ILNKLTP+ F+ L Q+ I L GVI IFDKA++EPTFC MYA C L+ LP F+ + G+K S G +E E R E R ++ R+ G L GEL K +I+ Sbjct: 1070 PMQVMHKAERKYQV--GTIADEEQAKQRQLKSILNKLTPQNFEKLFEQVKSVNIDNAVTLSGVISQIFDKALMEPTFCEMYADFCFHLSGALPDFNENGEKITFKRLLLNKCQEEFERGEKEEEEASRVAEEGQVEQTEEEREEKRLQVRRRMLGNI-----RLIGELYKKRMLTEKIM 1241 The following BLAST results are available for this feature:
BLAST of DY262855 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262855 ID=DY262855; Name=DY262855; organism=Citrus clementina; type=EST; length=1329bpback to top |