DY262858

Overview
NameDY262858
Unique NameDY262858
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1105
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262858 vs. ExPASy Swiss-Prot
Match: KADC1_ARATH (Probable adenylate kinase 1, chloroplastic OS=Arabidopsis thaliana GN=At2g37250 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 8.752e-31
Identity = 91/248 (36.69%), Postives = 117/248 (47.18%), Query Frame = 3
Query:  180 HGQASEPMLRLDSAG--LPPRRGVQWVLIGDPGVKKHVYADNLSKLLEVPHISMGSLVRQELSPRSALYKQIANAVNEGKLVPEDVIFALLSKRLEEGYYRGESGFILDGIPRTRIQAEXXXXXXXXXXXXNFQSTEDQLVKR-------------------NLESE----------AFSPHKEFLSLGGXXXXXXXXXXXWKEKFRIYAEQGKSLEDYYSKQRKLLNFQVAAAPGETWQGLLSALHL 830
            H  +  P L    A    P  R VQWV +G PGV K  YA  LS LL VPHI+ G LVR+EL+    L ++++  VN+GKLV +++I  LLSKRLE G  RGESGFILDG PRT  QAE            N +  E+ LV +                   NL+ E             PH+    +              K + RIY E  + LE+YY  + KL+ F +     E+W  LL AL L
Sbjct:   29 HASSPSPFLHGGGASRVAPKDRNVQWVFLGCPGVGKGTYASRLSTLLGVPHIATGDLVREELASSGPLSQKLSEIVNQGKLVSDEIIVDLLSKRLEAGEARGESGFILDGFPRTMRQAEILGDVTDIDLVVNLKLPEEVLVDKCLGRRTCSQCGKGFNVAHINLKGENGRPGISMDPLLPPHQ---CMSKLVTRADDTEEVVKARLRIYNETSQPLEEYYRTKGKLMEFDLPGGIPESWPRLLEALRL 273          
BLAST of DY262858 vs. ExPASy Swiss-Prot
Match: KADC_SOLTU (Adenylate kinase, chloroplastic OS=Solanum tuberosum GN=ADK PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 4.802e-29
Identity = 84/227 (37.00%), Postives = 109/227 (48.02%), Query Frame = 3
Query:  228 PPRRGVQWVLIGDPGVKKHVYADNLSKLLEVPHISMGSLVRQELSPRSALYKQIANAVNEGKLVPEDVIFALLSKRLEEGYYRGESGFILDGIPRTRIQAEXXXXXXXXXXXXNFQSTEDQLVKR-------------------NLESEAFSPHKEFLSLG-------GXXXXXXXXXXXWKEKFRIYAEQGKSLEDYYSKQRKLLNFQVAAAPGETWQGLLSALHL 830
            P  + VQWV +G PGV K  YA  LS LL VPHI+ G LVR EL     L KQ+A  VN+GKLV +++I  LLSKRLE G  +GE+GFILDG PRT  QAE            N +  E  LV++                   ++  E  +P      L                     KE+  IY ++ + +ED+Y  Q KLL F +     E+W  LL  L+L
Sbjct:   51 PKAKTVQWVFLGCPGVGKGTYASRLSTLLGVPHIATGDLVRDELKSSGPLSKQLAEIVNQGKLVSDEIILNLLSKRLESGEAKGEAGFILDGFPRTVRQAEILTEVTDIDLVVNLKLPERVLVEKCLGRRICSECGKNFNVASIDVAGENGAPRISMARLNPPFTVCFKLITRADDTEAIVKERLSIYWDKSQPVEDFYRSQGKLLEFDLPGGIPESWPKLLEVLNL 277          
BLAST of DY262858 vs. ExPASy Swiss-Prot
Match: KAD_TREDE (Adenylate kinase OS=Treponema denticola GN=adk PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.148e-14
Identity = 55/194 (28.35%), Postives = 87/194 (44.85%), Query Frame = 3
Query:  252 VLIGDPGVKKHVYADNLSKLLEVPHISMGSLVRQELSPRSALYKQIANAVNEGKLVPEDVIFALLSKRLEEGYYRGESGFILDGIPRTRIQAEXXXXXXXXXXXXNFQSTEDQLVKR------------NLESEAFSPHKEFL---SLGGXXXXXXXXXXXWKEKFRIYAEQGKSLEDYYSKQRKLLNFQVAAA 788
            + +G PG  K   A  +SK  ++PHIS G L R  +  ++ L K++   ++ G LV +D+  AL+ +RLE      + GFILDG PRT  QA+            NF  ++D+++KR            +   E   P KE +     G             +++   Y  Q   L DYY+K+  ++N     A
Sbjct:    4 IFLGPPGAGKGTLAFEVSKSYKIPHISTGDLFRAAIKEQTDLGKKVKAVIDSGALVSDDLTIALVKERLERD--DTKKGFILDGFPRTIAQADALEDIVKIDSVINFDISDDEVIKRLSGRRVCSSCGQSFHIEFVKPKKEGICDSCSGDLMIRPDDKIEAIQKRLETYRNQTAPLIDYYTKKDLIVNIDARPA 195          
BLAST of DY262858 vs. ExPASy Swiss-Prot
Match: KAD_CORU7 (Adenylate kinase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=adk PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 7.443e-14
Identity = 60/196 (30.61%), Postives = 89/196 (45.41%), Query Frame = 3
Query:  252 VLIGDPGVKKHVYADNLSKLLEVPHISMGSLVRQELSPRSALYKQIANAVNEGKLVPEDVIFALLSKRLEEGYYRGESGFILDGIPRTRIQAE-----XXXXXXXXXXXXNFQSTEDQLVKRNLESEAFSPHKEFLSLGGXXXXXXXXXXXWKEKFRIYAEQGKSLEDYYSKQRKLLNFQVAAAPGETWQGLLSAL 824
            VL+G PG  K   A  LS  L +PHIS G L R  +S  + L KQ    ++ GKLVP +V   ++  RLEE      +GF+LDG PRT  QA+                 N+Q +ED +V+R L       ++  +                + + ++Y E+   L DYY  Q ++LN     +  +  +  L AL
Sbjct:    4 VLLGPPGAGKGTQAQLLSDALNIPHISTGDLFRANISQGTELGKQAQEYMDAGKLVPTEVTANMVRARLEEA--DAANGFLLDGFPRTIEQADLLEEMLKEKDLKLDAVINYQVSEDVVVERMLSRGRNDDNESTI----------------RTRLQVYREETAPLIDYY--QGRILNIDAEGSVEDISEATLCAL 179          
BLAST of DY262858 vs. ExPASy Swiss-Prot
Match: KAD_THEM4 (Adenylate kinase OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=adk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 8.229e-13
Identity = 43/122 (35.25%), Postives = 68/122 (55.74%), Query Frame = 3
Query:  252 VLIGDPGVKKHVYADNLSKLLEVPHISMGSLVRQELSPRSALYKQIANAVNEGKLVPEDVIFALLSKRLEEGYYRGESGFILDGIPRTRIQAE-----XXXXXXXXXXXXNFQSTEDQLVKR 602
            V +G PG  K  YA  L ++L +PHIS G + R+E+S +S L +++ + +  G+LVP+D+   ++ +RL +   +   GFILDG PRT  QA+                  F+ +ED +VKR
Sbjct:    4 VFLGPPGAGKGTYAKELKEILGIPHISTGDMFREEISAKSELGRKVEDILKRGELVPDDLTNVIVKERLSKPDCK--KGFILDGYPRTVAQAKALDEILKKLGRELKFAIYFEVSEDVVVKR 123          
BLAST of DY262858 vs. ExPASy Swiss-Prot
Match: KAD_NATTJ (Adenylate kinase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=adk PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 8.229e-13
Identity = 58/209 (27.75%), Postives = 95/209 (45.45%), Query Frame = 3
Query:  252 VLIGDPGVKKHVYADNLSKLLEVPHISMGSLVRQELSPRSALYKQIANAVNEGKLVPEDVIFALLSKRLEEGYYRGESGFILDGIPRTRIQAE---XXXXXXXXXXXXNFQSTEDQLV-----KRNLESEAFSPHKEF----------LSLGGXXXXXXXXXXXWKEKFRIYAEQGKSLEDYYSKQRKLLNFQVAAAPGETWQGLLSAL 824
            +L+G PG  K   A+ LSK L+VPHI+ G + R+ +S  + L K+  + ++ G+LVP+DV+  ++ +RL++       GFILDG PRT  QAE                   ++D+L+     +R       S H +F             G             KE+  +Y E  + L +YY  +  L       +P E ++ +L A+
Sbjct:    4 ILMGPPGAGKGTQAEKLSKELDVPHIATGDIFRKAVSEGTELGKEAKSYMDAGQLVPDDVVIGIVEERLKKP--DCHEGFILDGFPRTVTQAEALDKVLSDNPLTAAVYIDVSKDELIDRLSGRRICRKCGKSYHIKFNPPQVRGVCDEDEGELYQRDDDNEETAKERLEVYLENTQPLVEYYQDRGILKKIDGTKSPEEVFRDILKAV 210          
BLAST of DY262858 vs. ExPASy Swiss-Prot
Match: KAD_STRCO (Adenylate kinase OS=Streptomyces coelicolor GN=adk PE=3 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 1.404e-12
Identity = 61/212 (28.77%), Postives = 90/212 (42.45%), Query Frame = 3
Query:  252 VLIGDPGVKKHVYADNLSKLLEVPHISMGSLVRQELSPRSALYKQIANAVNEGKLVPEDVIFALLSKRLEEGYYRGESGFILDGIPRTRIQAE-----XXXXXXXXXXXXNFQSTEDQLVK--------RNLESEAF-----SPHKEFLS--LGGXXXXXXXXXXXW-KEKFRIYAEQGKSLEDYYSKQRKLLNFQVAAAPGETWQGLLSAL 824
            VL+G PG  K   A  L++ L +PHIS G L R  +S ++ L K   + +N G LVP++V  A+   R+E+     E GF+LDG PR   QAE                 + ++ ED++VK        RN     F      P KE +    GG             +++  +Y  Q + + DYY  Q  +          E  +  L AL
Sbjct:    4 VLVGPPGAGKGTQATRLAETLHIPHISTGDLFRANISQQTELGKLAKSYMNAGNLVPDEVTIAMAKDRMEQP--DAEGGFLLDGFPRNVSQAEALDELLETEGMKLDAVLDLEAPEDEVVKRIAGRRVCRNEPKHVFHVTYTPPKKEGVCDVCGGELYQRDDDSEETVRKRLEVYHTQTEPIIDYYKSQGLVATIAATGPVDEVTRRALEAL 213          
BLAST of DY262858 vs. ExPASy Swiss-Prot
Match: KAD_THEAB (Adenylate kinase OS=Thermosipho africanus (strain TCF52B) GN=adk PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.394e-12
Identity = 52/191 (27.23%), Postives = 86/191 (45.03%), Query Frame = 3
Query:  252 VLIGDPGVKKHVYADNLSKLLEVPHISMGSLVRQELSPRSALYKQIANAVNEGKLVPEDVIFALLSKRLEEGYYRGESGFILDGIPRTRIQAE-----XXXXXXXXXXXXNFQSTEDQLVKRNLESEAFSPHKEFLSL---------------GGXXXXXXXXXXXWKEKFRIYAEQGKSLEDYYSKQRKL 764
            V +G PG  K  YA  L ++L +PHIS G + R+ ++ +S L K++   +  G LVP+D+  +++  RL +   +  +GFILDG PRT  QA+                  F+  E+++VKR       S   +  +L               G             ++++R+Y E    + +YY K  KL
Sbjct:    4 VFLGPPGAGKGTYAKRLIEMLNIPHISTGDMFREAVASKSELGKKVEEILKRGDLVPDDLTNSIVKDRLSKEDCK--NGFILDGFPRTVAQAKALDEIMRSLGKDLDYVIYFEVDEEEVVKRISNRRICSNCGKIYNLITLPPKVDGKCDVCGGTLYQREDDKEEVVRKRYRVYMENTYPVIEYYQKSNKL 192          
BLAST of DY262858 vs. ExPASy Swiss-Prot
Match: KAD_CORDI (Adenylate kinase OS=Corynebacterium diphtheriae GN=adk PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.188e-11
Identity = 46/124 (37.10%), Postives = 64/124 (51.61%), Query Frame = 3
Query:  252 VLIGDPGVKKHVYADNLSKLLEVPHISMGSLVRQELSPRSALYKQIANAVNEGKLVPEDVIFALLSKRLEEGYYRGESGFILDGIPRTRIQAE-----XXXXXXXXXXXXNFQSTEDQLVKRNL 608
            VL+G PG  K   A  LS+ L +PHIS G L R  +   + L K+  + ++ GKLVP DV   ++  RL++     E GF+LDG PRT  QAE                 N++  ED +V+R L
Sbjct:    4 VLLGPPGAGKGTQAAILSEKLRIPHISTGDLFRANIGEGTPLGKEAKSYIDAGKLVPTDVTARMVKARLQKD--DAEVGFLLDGFPRTVEQAEILKEMLKGFGVELNGVINYEVAEDVVVERML 125          
BLAST of DY262858 vs. ExPASy Swiss-Prot
Match: KAD_UNCMA (Adenylate kinase OS=Uncultured methanogenic archaeon RC-I GN=adk PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.647e-11
Identity = 39/96 (40.62%), Postives = 60/96 (62.50%), Query Frame = 3
Query:  243 VQWVLIGDPGVKKHVYADNLSKLLEVPHISMGSLVRQELSPRSALYKQIANAVNEGKLVPEDVIFALLSKRLEEGYYRGESGFILDGIPRTRIQAE 530
            +Q+VL G PG  K   A  LS+ L VPHIS G ++R+ +   +AL  +  + +++G+LVP++++  L+  RL +   R   GF+LDG PRT  QAE
Sbjct:    1 MQFVLFGPPGAGKGTQAKFLSEELNVPHISTGDILRENVKKGTALGLKAKSYMDKGELVPDNLLIDLIKDRLSQPDCR--KGFLLDGFPRTIPQAE 94          
The following BLAST results are available for this feature:
BLAST of DY262858 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
KADC1_ARATH8.752e-3136.69Probable adenylate kinase 1, chloroplastic OS=Arab... [more]
KADC_SOLTU4.802e-2937.00Adenylate kinase, chloroplastic OS=Solanum tuberos... [more]
KAD_TREDE1.148e-1428.35Adenylate kinase OS=Treponema denticola GN=adk PE=... [more]
KAD_CORU77.443e-1430.61Adenylate kinase OS=Corynebacterium urealyticum (s... [more]
KAD_THEM48.229e-1335.25Adenylate kinase OS=Thermosipho melanesiensis (str... [more]
KAD_NATTJ8.229e-1327.75Adenylate kinase OS=Natranaerobius thermophilus (s... [more]
KAD_STRCO1.404e-1228.77Adenylate kinase OS=Streptomyces coelicolor GN=adk... [more]
KAD_THEAB2.394e-1227.23Adenylate kinase OS=Thermosipho africanus (strain ... [more]
KAD_CORDI1.188e-1137.10Adenylate kinase OS=Corynebacterium diphtheriae GN... [more]
KAD_UNCMA2.647e-1140.63Adenylate kinase OS=Uncultured methanogenic archae... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10AF05RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262858 ID=DY262858; Name=DY262858; organism=Citrus clementina; type=EST; length=1105bp
CCAGCTTCTCAACTTTTCCAAAAGCAAAAATATCTTTCGAGCGCCGACAC
GCCATGGCCGGACTGAGCCGACTGAGAGCAGCCGCCGCCCTGCAGCTGCG
CCAGCTAGCCAGAAGCCGGGCCTACGGATCGGCGGCTGCGGCTCAGCTGC
AGTACGACTACGACGACGAGTGCGATCTCCACGGACAGGCGAGCGAGCCG
ATGCTGCGGCTCGACTCGGCTGGGTTGCCGCCGAGGAGAGGAGTGCAGTG
GGTGTTAATTGGTGACCCGGGTGTGAAGAAACACGTGTACGCCGATAATC
TGTCGAAACTTCTAGAAGTTCCTCATATCTCAATGGGAAGTCTTGTTAGA
CAAGAGCTTAGCCCTCGATCTGCTCTCTATAAACAGATCGCGAATGCTGT
AAATGAAGGAAAGCTTGTGCCAGAAGATGTAATTTTTGCATTGTTGTCAA
AGAGGCTGGAAGAAGGATACTACAGGGGAGAAAGTGGGTTCATTCTGGAT
GGAATTCCTCGGACAAGGATTCAAGCCGAAATTCTTGATCAAATTGTGGA
TGTTGATCTAGTCGTCAATTTTCAGAGCACTGAGGACCAATTGGTTAAAA
GGAATCTAGAAAGTGAAGCCTTTTCTCCTCATAAAGAATTTCTTAGCTTG
GGCGGTGCCAGATTTTCTGCTGCTGATGCAGCCAGTGCCTGGAAGGAGAA
GTTCCGTATCTATGCAGAGCAGGGTAAGTCATTGGAAGATTATTACAGTA
AACAAAGGAAACTTCTTAACTTTCAAGTGGCAGCTGCACCTGGAGAAACC
TGGCAAGGATTGTTATCTGCATTACATCTCCAGCATATGAATGCTGTTAG
TTCTTCTCAGAAGTTGACAGCATGAAATAGTTTCCATCTGATTCAGAGAC
TGCTCTATTCTTATTCCCGCGTGATAGTAAATATGTATAACATGAGTTAC
AGAGCGAATTAAATTTTGATTGGTTTGGATTTAAGTTTTGTCATTTATAA
TTGAAGGATGCTCAGTTTGGATTGTAATTTTGTTTCGAAGTGAAAAATGG
AAAAAACTGCTGGCATATATGAAATACCATAATCCCAAGAATGCATTTTC
CCTTT
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