DY262859
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY262859 vs. ExPASy Swiss-Prot
Match: C3H13_ORYSJ (Zinc finger CCCH domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=Os02g0161200 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 7.040e-45 Identity = 109/276 (39.49%), Postives = 150/276 (54.35%), Query Frame = 3 Query: 144 YKTRICVLYQKGRCSRPTCSFAHGDAELRRP------FRSHHGGPDYRVGDLRDKLDRRLSPQKIYSPGRDTRGR---------NRFRGLSPSRSPENKSDRKRWKKQHLDGPREFSASLKISDGINDRVKERKFTPSDSXXXXXXXXXXXXXDINVLEDRKLQLETNEEEKGQEADILSSRIXXXXXXXXXXXXXXXRIASKIKKFVKAHNRHSQMQDDLKRSQARLQKLGYHLGLDATKVGGNEEDSSINIMSDEETTNYHLVDPQNDKQTIPF 926 YKT++C L+Q+G C+R TCSFAHG ++RRP F H G DYR GD R ++DRR SP++ +SPGR++RG +R R S SRSP KS+R+ KK DG S SL +SD ND K+ KF+ D D+ L D K Q+E +EK E +SS++ R+ SK+KKF+KAH R + Q+++KRSQAR ++LG L D K G NEE SS+N +E + N K++IP+ Sbjct: 11 YKTKLCALWQRGNCNRDTCSFAHGHGDIRRPPSSRGAFTHHPGRRDYRAGDFRGRIDRRFSPRRRHSPGRESRGHRPLYDRRPSSRERDSSYSRSPSRKSERRHEKKTD-DGETNSSRSLSLSDN-NDEKKKDKFSSGDEKEDHEKQLKQIRLDMEALRDDKTQMEVILDEKIDEVRKISSKVNDLEVQLRREKDECHRMTSKMKKFIKAHARFLKAQEEVKRSQARFERLGDLLASDILKRGANEEGSSVNEDLNERSPN----TAATKKRSIPY 280
BLAST of DY262859 vs. ExPASy Swiss-Prot
Match: C3H40_ARATH (Zinc finger CCCH domain-containing protein 40 OS=Arabidopsis thaliana GN=At3g21810 PE=1 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 6.589e-43 Identity = 110/290 (37.93%), Postives = 150/290 (51.72%), Query Frame = 3 Query: 144 YKTRICVLYQK-GRCSRPTCSFAHGDAELRRPFRSHHGGPDYRV------------GDLRDKLDRRLSPQKIYSPGRDTRGRNRFRGLSPSRSPENKSDRKRWKKQHLDGPREFSASLKISDGINDRVKERKFTPSDSXXXXXXXXXXXXXDINVLEDRKLQLETNEEEKGQEADILSSRIXXXXXXXXXXXXXXXRIASKIKKFVKAHNRHSQMQDDLKRSQARLQKLGYHLGLDATKVGGNEEDSSINIMSDEETTNYHL---VDPQNDKQTIPFPEQKKLHVDRDTT 965 YKT++C+L+ K G CSRP C+FAHG+AELRRP S G + + DLRD+L R+ SP++ S R R RF G S EN+ D+ + + D R+++ LK+ + I DR ++ + D+ +L D KL+LE + E K E DIL+SRI RI S KKFVK +NR + QDDLKRS+ARLQKLG L GN D ++I+SDEET +L DP N+ Q +KK +VD+ TT Sbjct: 7 YKTKLCILFNKTGDCSRPNCTFAHGNAELRRPGESSFTGRRHNMDSDLRDRRHNMDSDLRDRLGRQFSPERRPSLDRSGRRVQRFSGHDNSMPFENRRDKDYRENRRFDERRDYAGGLKVGNRIEDRAEDGRNKFHGYNNVLEEQLKDVEMDVKMLTDDKLRLEASVERKAHEVDILTSRIQELETQLDREKDECRRITSSSKKFVKEYNRFLRAQDDLKRSEARLQKLGNQLSTYLAGSEGNNRDVGLDIVSDEETNGRNLRTACDPHNELQNTSSLSRKKHYVDQYTT 296 The following BLAST results are available for this feature:
BLAST of DY262859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262859 ID=DY262859; Name=DY262859; organism=Citrus clementina; type=EST; length=1205bpback to top |