DY262862

Overview
NameDY262862
Unique NameDY262862
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1325
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY262862 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.515e-19
Identity = 77/258 (29.84%), Postives = 117/258 (45.35%), Query Frame = 2
Query:  365 VSLTVGTPPQNVSMVLDTGSELSWLHCNNTRYSYPNA---FDPNLSSSYKPVTCSSPTCVNRTRDFTIPVSCDNNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLIFGCMDSVFSSSSDEDGKNTGLMGMNRGSLSFVSQMGFPKFSYCIS--GADFSXXXXXXXXXXXXXXXVNYTPLIQMTTPLPYFDRVAYTVQLERIKVLG*FTPIPRILFGTGQNRGGSNNGGFKYPIPFFSPATLSWL*NRVFEPNRR 1123
            ++L++GTP Q  S ++DTGS+L W  C      +  +   F+P  SSS+  + CSS  C    +  + P +C NN  C  T  Y D S ++G++ ++    GS  I  + FGC ++   +     G   GL+GM RG LS  SQ+   KFSYC++  G+                     T LIQ ++ +P F    Y + L  + V     PI    F    N G    GG    I   S  TL++  N  ++  R+
Sbjct:   97 MNLSIGTPAQPFSAIMDTGSDLIWTQCQPCTQCFNQSTPIFNPQGSSSFSTLPCSSQLC----QALSSP-TCSNN-FCQYTYGYGDGSETQGSMGTETLTFGSVSIPNITFGCGEN---NQGFGQGNGAGLVGMGRGPLSLPSQLDVTKFSYCMTPIGSSTPSNLLLGSLANSVTAGSPNTTLIQ-SSQIPTF----YYITLNGLSVGSTRLPIDPSAFALNSNNG---TGG----IIIDSGTTLTYFVNNAYQSVRQ 333          
BLAST of DY262862 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.858e-18
Identity = 51/155 (32.90%), Postives = 82/155 (52.90%), Query Frame = 2
Query:  365 VSLTVGTPPQNVSMVLDTGSELSWLHCNNTR--YSYPNA-FDPNLSSSYKPVTCSSPTCVNRTRDFTIPVSCDNNSLCHATLSYADASSSEGNLASDQFFIGSSEISGLIFGCMDSVFSSSSDEDGKNTGLMGMNRGSLSFVSQMGFPKFSYCIS 820
            +++ +GTP  + S ++DTGS+L W  C      +S P   F+P  SSS+  + C S  C +      +P    NN+ C  T  Y D S+++G +A++ F   +S +  + FGC +    +     G   GL+GM  G LS  SQ+G  +FSYC++
Sbjct:   98 MNVAIGTPDSSFSAIMDTGSDLIWTQCEPCTQCFSQPTPIFNPQDSSSFSTLPCESQYCQD------LPSETCNNNECQYTYGYGDGSTTQGYMATETFTFETSSVPNIAFGCGE---DNQGFGQGNGAGLIGMGWGPLSLPSQLGVGQFSYCMT 243          
The following BLAST results are available for this feature:
BLAST of DY262862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NEP1_NEPGR1.515e-1929.84Aspartic proteinase nepenthesin-1 OS=Nepenthes gra... [more]
NEP2_NEPGR2.858e-1832.90Aspartic proteinase nepenthesin-2 OS=Nepenthes gra... [more]
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Properties
Property NameValue
Genbank descriptionIC0AAA10AF09RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY262862 ID=DY262862; Name=DY262862; organism=Citrus clementina; type=EST; length=1325bp
CAAATCCACAAATCTCACTCTCAAGATCCAAGAATAGAAGAAGCTTCCAA
CTCTCTGACTCGGACTCCTTTGATTTCAGTTCATTGTGTTTTCCTTTCCC
AGATTCTCTGTATTTTCTATTGCAGTACCCTGAAACAGAGGCTGTTTCAT
TACGATGAAAGGTTACATTTTTGGGTACAGTTTCTTGAACCCATGTCTAA
AATCTCCGTATTTTTCACTCCTCCACGTTCTTTTGATCCAAATCCAGCTC
GCCTTTTCTTCGCCAGATGTGCTAATACTGCCCCTCAGGACTCAAGAAAT
TCCATCCGGGTCCTTCCCGAGATCGCCAAACAAGCTTCCTTTTCATCACA
ATGTGAGCCTCGCAGTCTCCTTAACAGTGGGCACGCCTCCGCAAAACGTC
TCAATGGTTTTGGACACCGGCAGTGAGCTCTCTTGGCTCCATTGCAACAA
TACCCGCTATTCTTACCCGAATGCTTTTGACCCGAACCTGTCCTCCTCTT
ATAAACCGGTTACTTGTTCTTCACCCACCTGCGTCAACCGGACCAGAGAC
TTCACCATTCCGGTTTCTTGCGACAACAACAGCCTCTGCCACGCCACACT
CTCCTACGCGGACGCTTCTTCATCAGAAGGAAATCTCGCGTCCGATCAAT
TTTTTATCGGGTCTTCCGAGATTTCGGGTCTGATTTTCGGGTGTATGGAC
TCGGTATTCAGCTCCAGCTCGGATGAAGACGGGAAGAACACTGGCTTAAT
GGGCATGAATCGCGGCTCATTATCTTTTGTATCTCAAATGGGTTTCCCAA
AATTCTCTTACTGCATATCGGGAGCCGATTTTTCGGGGCTGCTATTACTC
GGTGATGCCGACTTGCCTTGGCTCCTCCCGGTGAATTACACGCCATTAAT
CCAAATGACAACCCCATTACCGTATTTTGATCGAGTTGCTTACACCGTTC
AGCTTGAAAGAATCAAAGTCTTGGGATAATTTACTCCGATACCAAGAATC
CTCTTTGGTACGGGACAAAACCGGGGCGGGTCAAACAATGGTGGATTTAA
GTACCCAATTCCCTTTTTTTCTCCGGCCACCCTAAGCTGGCTTTAAAACC
GAGTTTTTGAACCAAACCGCAGGTTTTTAAAAATTTTTGGAGGGATTAAA
ATTTTGTTTTCCCAGGGAACAAAGGGATTTTGGGGGCCCCGGCATCCCCC
CCAAAAAACAAACCCGGGGCCCGCCCCCCCCCCCACCCAACAACAAATAA
ACTCCCTGGGGTTTTCTGGGGGGGGGGCCCAAAAAAAAAGGAGGATATTT
TAAGTGGGGGCGCCCCACCCCCTCT
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