DY262944
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY262944 vs. ExPASy Swiss-Prot
Match: PSMD4_ARATH (26S proteasome non-ATPase regulatory subunit 4 OS=Arabidopsis thaliana GN=MBP1 PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.445e-45 Identity = 115/250 (46.00%), Postives = 146/250 (58.40%), Query Frame = 3 Query: 3 DIVNFGEDD-EGNTEKLEALLAAVNNNDSSHLVHVPPGPNALSDVLLSTPIFTGDGEXXXXXXXXXXXXXXXXXXXYEFGVDPNLDPELALALRVSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSQDVT--MTDQDSVPASEADDKKKTTKHDEGLLQEAIAMSSTPSYPSGRDTNMSEVAEDDPELALALQLSMQDGTKDAPSHSDMSQLLADQAFVSSILASLPGVDPEDPSVKDVLTSMQNQSE 743 DIVNFGEDD E +KLEALL AVNNND SH+VHVP G NALSDVLLSTP+FTGD ++FGVDPN+DPELALALRVSM S+SQ+ TD+++ P E D LL +AIAMS D NMSE A++D +LALALQ+SM G + + + + LL +QAF+SS+L+SLPGVDP DP+VK++L S+ ++S+ Sbjct: 140 DIVNFGEDDDEEKPQKLEALLTAVNNNDGSHIVHVPSGANALSDVLLSTPVFTGD--EGASGYVSAAAAAAAAGGDFDFGVDPNIDPELALALRVSMEEERARQEAAAKKAADEAGQKDKDGDTASASQETVARTTDKNAEPMDE----------DSALLDQAIAMSV-------GDVNMSEAADEDQDLALALQMSM-SGEESSEATGAGNNLLGNQAFISSVLSSLPGVDPNDPAVKELLASLPDESK 369
BLAST of DY262944 vs. ExPASy Swiss-Prot
Match: PSMD4_DROME (26S proteasome non-ATPase regulatory subunit 4 OS=Drosophila melanogaster GN=Pros54 PE=1 SV=2) HSP 1 Score: 105.145 bits (261), Expect = 6.531e-22 Identity = 86/267 (32.21%), Postives = 126/267 (47.19%), Query Frame = 3 Query: 3 DIVNFGEDDEGNTEKLEALLAAVNNNDS--SHLVHVPPGPNALSDVLLSTPIFTGDGEXXXXXXXXXXXXXXXXXXXYEFGVDPNLDPELALALRVSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSQDVTMTDQDSVPASEADDKKKTTKHDEGLLQEAIAMSS-TPSYPSGRDTNMSEVAEDDPELALALQLSMQDGTKDAPSHS-----------------DMSQLLADQAFVSSILASLPGVDPEDPSVKDVLTSMQNQSE 743 DIV+FG D N E L A + A+N D SHLV VP G + LSD LLS+PI G+ +EFGVDPN DPELALALRVSM V+ + + ++ A+++ T +E +LQ A+A+S+ TP NM+E + ++A A+Q+SMQD D+ + D S+++ D AF+ S+L +LPGVDP+ +V+D + S+ + Sbjct: 139 DIVSFG-DHGNNNEILTAFINALNGKDGTGSHLVSVPRG-SVLSDALLSSPIIQGED---------GMGGAGLGGNVFEFGVDPNEDPELALALRVSMEEQRQRQESEQRRANPDGAPPTGGDAGGGGG--VSGSGPGNEESAGAENEANT---EEAMLQRALALSTETPEDNLPDFANMTE----EEQIAFAMQMSMQDAPDDSVTQQAKRPKTDEANAPMDVDEDYSEVIGDPAFLQSVLENLPGVDPQSEAVRDAVGSLNKDKD 385
BLAST of DY262944 vs. ExPASy Swiss-Prot
Match: PSMD4_MOUSE (26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus GN=Psmd4 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.609e-20 Identity = 83/267 (31.09%), Postives = 124/267 (46.44%), Query Frame = 3 Query: 3 DIVNFGEDDEGNTEKLEALLAAVNNNDS--SHLVHVPPGPNALSDVLLSTPIFTGDGEXXXXXXXXXXXXXXXXXXXYEFGVDPNLDPELALALRVSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSQDVTMTDQDSVPASEADDKKKTTK-HDEGLLQEAIAMS--STPSYPSGRDTNMSEVAEDDPELALALQLSMQD----------------GTKDAPSHSDMSQLLADQAFVSSILASLPGVDPEDPSVKDVLTSMQNQS 740 DI+NFGE+ E NTEKL A + +N D SHLV VPPGP+ L+D L+S+PI G+G +EFGVDP+ DPELALALRVSM Q+ + A+EA T+ D+ LL+ I P P ++S + E++ ++A A+Q+S+Q T D D ++ D F+ S+L +LPGVDP + +++ V+ ++ +Q+ Sbjct: 139 DIINFGEE-EVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPS-LADALISSPILAGEG----------GAMLGLGASDFEFGVDPSADPELALALRVSM-------------------------EEQRQRQEEEARRAAAASAAEAGIATPGTEDSDDALLKMTINQQEFGRPGLP-----DLSSMTEEE-QIAYAMQMSLQGTEFSQESADMDASSAMDTSDPVKEEDDYDVMQDPEFLQSVLENLPGVDPNNAAIRSVMGALASQA 362
BLAST of DY262944 vs. ExPASy Swiss-Prot
Match: PSMD4_BOVIN (26S proteasome non-ATPase regulatory subunit 4 OS=Bos taurus GN=PSMD4 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.744e-20 Identity = 84/266 (31.58%), Postives = 127/266 (47.74%), Query Frame = 3 Query: 3 DIVNFGEDDEGNTEKLEALLAAVNNNDS--SHLVHVPPGPNALSDVLLSTPIFTGDGEXXXXXXXXXXXXXXXXXXXYEFGVDPNLDPELALALRVSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSQDVTMTDQDSVPASEADDKKKTTK-HDEGLLQEAIAMSSTPSYPSGRDTNMSEVAEDDPELALALQLSMQ--------DGTKDAPSHSDMSQ---------LLADQAFVSSILASLPGVDPEDPSVKDVLTSMQNQS 740 DI+NFGE+ E NTEKL A + +N D SHLV VPPGP+ L+D L+S+PI G+G +EFGVDP+ DPELALALRVSM Q+ + A+EA T+ D+ LL+ I S + ++S + E++ ++A A+Q+S+Q DA S D S+ ++ D F+ S+L +LPGVDP + ++++ + S+ +Q+ Sbjct: 139 DIINFGEE-EVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPS-LADALISSPILAGEG----------GAMLGLGASDFEFGVDPSADPELALALRVSM-------------------------EEQRQRQEEEARRAAAASAAEAGIATAGTEDSDDALLKMTI---SQQEFGRTGLPDLSSMTEEE-QIAYAMQMSLQGAEFGQAESADMDASSAMDTSEPTKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRNAMGSLASQA 363
BLAST of DY262944 vs. ExPASy Swiss-Prot
Match: PSMD4_HUMAN (26S proteasome non-ATPase regulatory subunit 4 OS=Homo sapiens GN=PSMD4 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 4.681e-20 Identity = 84/266 (31.58%), Postives = 127/266 (47.74%), Query Frame = 3 Query: 3 DIVNFGEDDEGNTEKLEALLAAVNNNDS--SHLVHVPPGPNALSDVLLSTPIFTGDGEXXXXXXXXXXXXXXXXXXXYEFGVDPNLDPELALALRVSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSQDVTMTDQDSVPASEADDKKKTTK-HDEGLLQEAIAMSSTPSYPSGRDTNMSEVAEDDPELALALQLSMQ--------DGTKDAPSHSDMSQ---------LLADQAFVSSILASLPGVDPEDPSVKDVLTSMQNQS 740 DI+NFGE+ E NTEKL A + +N D SHLV VPPGP+ L+D L+S+PI G+G +EFGVDP+ DPELALALRVSM Q+ + A+EA T+ D+ LL+ I S + ++S + E++ ++A A+Q+S+Q DA S D S+ ++ D F+ S+L +LPGVDP + ++++ + S+ +Q+ Sbjct: 139 DIINFGEE-EVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPS-LADALISSPILAGEG----------GAMLGLGASDFEFGVDPSADPELALALRVSM-------------------------EEQRQRQEEEARRAAAASAAEAGIATTGTEDSDDALLKMTI---SQQEFGRTGLPDLSSMTEEE-QIAYAMQMSLQGAEFGQAESADIDASSAMDTSEPAKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRNAMGSLASQA 363
BLAST of DY262944 vs. ExPASy Swiss-Prot
Match: PIPSL_HUMAN (Putative PIP5K1A and PSMD4-like protein OS=Homo sapiens GN=PIPSL PE=5 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.381e-18 Identity = 81/266 (30.45%), Postives = 123/266 (46.24%), Query Frame = 3 Query: 3 DIVNFGEDDEGNTEKLEALLAAVNNNDS--SHLVHVPPGPNALSDVLLSTPIFTGDGEXXXXXXXXXXXXXXXXXXXYEFGVDPNLDPELALALRVSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSQDVTMTDQDSVPASEADDKKKTTK-HDEGLLQEAIAMSSTPSYPSGRDTNMSEVAEDDPELALALQLSMQ--------DGTKDAPSHSDMSQ---------LLADQAFVSSILASLPGVDPEDPSVKDVLTSMQNQS 740 DI+NFGE+ E NTEKL A + +N D SHLV VPPGP+ L+D L+S PI G+G +EFGVDP+ DPELAL LRV M Q+ + A+EA T+ D+ LL+ I S + ++S + E++ ++ A+Q+S+Q DA S D S+ ++ D F+ S+L +LPGVDP + ++++ + S+ +Q+ Sbjct: 624 DIINFGEE-EVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPS-LADALISFPILAGEG----------GAMMGLGASDFEFGVDPSADPELALVLRVFM-------------------------EEQRQRQEEEARQAAAASAAEAGIATTGTEDSDDALLKMTI---SQQEFGHTGLPDLSSMTEEE-KIVCAMQMSLQGAEFGLAESADIDASSAMDTSEPAKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRNAVGSLASQA 848
BLAST of DY262944 vs. ExPASy Swiss-Prot
Match: PSMD4_DICDI (26S proteasome non-ATPase regulatory subunit 4 OS=Dictyostelium discoideum GN=psmD4 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.722e-18 Identity = 80/269 (29.74%), Postives = 120/269 (44.61%), Query Frame = 3 Query: 3 DIVNFGEDDEGNTEKLEALLAAVNNNDSSHLVHVPPGPNALSDVLLSTPIF-TGDGEXXXXXXXXXXXXXXXXXXXYEFGVDPNLDPELALALRVSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSQDVTMTDQDSVPASEADDKKKTTKHDEGLLQEA---IAMSSTPSYPSGRDTNMSEVAEDDPELALALQLSM-------QDGT-----------KDAPSHSDMSQLLADQAFVSSILASLPGVDPEDPSVKDVLTSMQNQSE 743 DI+NFGE E N++KLEA + VNNND SHL+ VPPGP+ LSD++L +PI +G G+ EF ++ + DP+LA+AL++S+ +++K+ + + +EA S T + + ++NM EDDPELA AL LSM Q T + P+ S+ DQ F++S L SLPGVDP +K+ L ++ + E Sbjct: 140 DIINFGEVTE-NSDKLEAFINDVNNNDESHLLTVPPGPHILSDIILQSPIVESGSGQFGS-----------------EF-INADTDPDLAMALKLSL-----------------------------------------------EEEKQRQERERKAREEANGGSTNSGTTTTTAPTESNMDVNFEDDPELAEALALSMATDKMEVQSSTTNTDSQPPQQQQQPPTDDTSSEAFKDQDFLNSTLNSLPGVDPN--RIKNALENLSKKDE 340
BLAST of DY262944 vs. ExPASy Swiss-Prot
Match: RPN10_YEAST (26S proteasome regulatory subunit RPN10 OS=Saccharomyces cerevisiae GN=RPN10 PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 4.243e-13 Identity = 42/98 (42.86%), Postives = 59/98 (60.20%), Query Frame = 3 Query: 3 DIVNFGEDDEGNTEKLEALLAAVNN--NDSSHLVHVPPGPNALSDVLLSTPIFTGDGEXXXXXXXXXXXXXXXXXXXYEFGVDPNLDPELALALRVSM 290 DI+NFGE ++ NTE L+ +AAVNN ++SHL+ V PGP L + + S+PI +G +FGVDP++DPELA+ALR+SM Sbjct: 140 DIINFGEIEQ-NTELLDEFIAAVNNPQEETSHLLTVTPGPRLLYENIASSPIILEEGSSGMGAFGGSGGDSDANGTFMDFGVDPSMDPELAMALRLSM 236 The following BLAST results are available for this feature:
BLAST of DY262944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY262944 ID=DY262944; Name=DY262944; organism=Citrus clementina; type=EST; length=1015bpback to top |