DY263054
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPR3_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic OS=Arabidopsis thaliana GN=CLPR3 PE=1 SV=1) HSP 1 Score: 361.688 bits (927), Expect = 5.837e-99 Identity = 198/324 (61.11%), Postives = 226/324 (69.75%), Query Frame = 2 Query: 89 SFLQAPMAALVPSTSVHS------LRSKSTRSLKTF-------CSAKIPNPMPAHINPNDPFLSKLXXXXXXSPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEHRXXXXXXXXXXXXXHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKARNLESSTRVSGVVRELFRAEVAPPKDWDKN 1021 S LQA M +L+P +S S S R+LKTF SAKIP P INP DPFLS L SPE +NRP N+ PYLDI+DSP LM+SPAQVERS +YNEHR GRIVYIGMPLVPAVTELVVAELMYLQW+DPK PIY+YINSTGTTRDDGE+VGMESEGFAIYD+LMQ+K EVHTV VGAAIG ACLLL+AGTKGKRFMMPHAK MIQQPR+PSSGL+PASDVLIRAKE + NRD LV+LL +HTGNS E V + KA+ R+ +E A+V P +++DKN Sbjct: 3 SCLQASMNSLLPRSSSFSPHPPLSSNSSGRRNLKTFRYAFRAKASAKIPMPP---INPKDPFLSTLASIAANSPEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPPPDLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVGMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPSSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVIDRILWRGQEKIIADVVPSEEFDKN 323
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPR_SYNY3 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechocystis sp. (strain PCC 6803) GN=clpR PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 2.951e-34 Identity = 78/183 (42.62%), Postives = 118/183 (64.48%), Query Frame = 2 Query: 440 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKARNLESSTRV 958 RIVY+GMPL + VT+L++A+L+YLQ+ DP PIY YINSTGT+ G++VG E+E FAI DTL +K VHT+ +G A+G A ++L++GTKG R +PHA I++ Q R + G A+D+ IRAKE + N+ T++++L +TG ++E + K ++ T +A+ RV Sbjct: 31 RIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDDPDKPIYFYINSTGTSWYTGDAVGFETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSSGTKGYRASLPHATIVLNQNRTGAQG--QATDIQIRAKEVISNKQTMLEILSLNTGQTQEKLAKDMDRTFYLTPAQAKEYGLIDRV 211
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPR_SYNE7 (Putative ATP-dependent Clp protease proteolytic subunit-like OS=Synechococcus elongatus (strain PCC 7942) GN=clpR PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 9.493e-33 Identity = 70/174 (40.23%), Postives = 113/174 (64.94%), Query Frame = 2 Query: 440 RIVYIGMPLVPA----------VTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKA 931 RI+Y+GMPL + VTEL++A+L+YL++ +P+ PIY YINSTGT+ G+++G E+E FAI DT+ +K VHT+ +G A+G A ++L+ GT G R +PHA I++ QPR + G ASD+ IRAKE + N+ T++++ ++TG + + + + + T +A Sbjct: 33 RIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYTGDAIGYETEAFAICDTMRYIKPPVHTICIGQAMGTAAMILSGGTPGNRASLPHATIVLNQPRTGAQG--QASDIQIRAKEVLANKRTMLEIFARNTGQDPDRLARDTDRMLYMTPAQA 204
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPR4_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic OS=Arabidopsis thaliana GN=CLPR4 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.371e-31 Identity = 115/324 (35.49%), Postives = 165/324 (50.93%), Query Frame = 2 Query: 77 AMSTSF--LQAPMAALVPSTSVHSLRSK----STRSLKTFCSAKIPNPMPAHINPNDPFLSKLXXXXXXSPEAFVNRPSNSGTLPYLDIYDSPTLMASPAQVERSASYNEHRXXXXXXXXXXXXXHGRIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFV------------TKTLEEHIIWTLEKARNLESSTRVSGVVRELFRAEV 994 A +TSF L+A +A++PS S +LRSK S+ SL+ S +P +D +KL +P F + G + + + + P ASY RIVY+GM LVP+VTEL++AE +YLQ+ D + PIYLYINSTGTT+ +GE +G ++E FAIYD + +K + T+ VG A G A LLL AG KG R +P + IMI+QP G A+DV I KE + +VKL +H G S E + T+ +E II +K E ++ GVV +L +A++ Sbjct: 6 ATATSFTTLRARTSAIIPS-STRNLRSKPRFSSSSSLRASLSNGFLSPYTGGSISSDLCGAKLRAESL-NPLNFSSSKPKRGVVTMVIPFSKGSAHEQPPP--DLASY---------------LFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTK-NGEKLGYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQG--QATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGII---DKVVYNERGSQDRGVVSDLKKAQL 304
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPR1_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic OS=Arabidopsis thaliana GN=CLPR1 PE=1 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.188e-29 Identity = 69/155 (44.52%), Postives = 102/155 (65.81%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRL-PSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLE 901 RI Y+GMP+VPAVTEL+VA+ M+L + +P PIYLYINS GT + E+VG E+E +AI DT+ K +V+T+ G A G A +LL+ G KG R + PH+ + P++ SSG A D+ I+AKE N + ++LL + TG S+E + + ++ Sbjct: 180 RICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVGSETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKVNRSSG--AAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIK 332
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_THEYD (ATP-dependent Clp protease proteolytic subunit OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=clpP PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.160e-28 Identity = 70/165 (42.42%), Postives = 100/165 (60.61%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RI++IG + V +V+A+L++LQ DP+ I++YINS G GM S G AIYDT+ +K ++ T +G A MAC+LLAAGTKGKRF +PH+++MI QP G A+DV I AKE + +D L +L +HTG E + K E + E+A+ Sbjct: 28 RIIFIGTEINDHVANVVIAQLLFLQTEDPEKDIHIYINSPG---------GMVSSGLAIYDTMQYVKPDIATYCIGQASSMACVLLAAGTKGKRFALPHSRVMIHQPIGGFYG--QATDVEIHAKEILKMKDLLNNILAKHTGQPIEKIQKDTERDFFMSAEEAK 181
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_THESQ (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga sp. (strain RQ2) GN=clpP PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.160e-28 Identity = 69/165 (41.82%), Postives = 100/165 (60.61%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RIV++G P+ V LV+A+L++L+ DP +YLYINS G G + G AIYDT+ +KC+V T+ VG A MA +LLAAG KGKR+ +P+A+IMI QP + G PA DV I +E + +D L ++L +HTG E + K + + E+A+ Sbjct: 37 RIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPG---------GSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEG--PAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAK 190
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_THEP1 (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=clpP PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.160e-28 Identity = 69/165 (41.82%), Postives = 100/165 (60.61%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RIV++G P+ V LV+A+L++L+ DP +YLYINS G G + G AIYDT+ +KC+V T+ VG A MA +LLAAG KGKR+ +P+A+IMI QP + G PA DV I +E + +D L ++L +HTG E + K + + E+A+ Sbjct: 37 RIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPG---------GSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEG--PAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAK 190
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP_THEMA (ATP-dependent Clp protease proteolytic subunit OS=Thermotoga maritima GN=clpP PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.160e-28 Identity = 69/165 (41.82%), Postives = 100/165 (60.61%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKAR 934 RIV++G P+ V LV+A+L++L+ DP +YLYINS G G + G AIYDT+ +KC+V T+ VG A MA +LLAAG KGKR+ +P+A+IMI QP + G PA DV I +E + +D L ++L +HTG E + K + + E+A+ Sbjct: 37 RIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPG---------GSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEG--PAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAK 190
BLAST of DY263054 vs. ExPASy Swiss-Prot
Match: CLPP2_BACHD (ATP-dependent Clp protease proteolytic subunit 2 OS=Bacillus halodurans GN=clpP2 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 6.589e-26 Identity = 67/164 (40.85%), Postives = 96/164 (58.54%), Query Frame = 2 Query: 440 RIVYIGMPLVPAVTELVVAELMYLQWMDPKAPIYLYINSTGTTRDDGESVGMESEGFAIYDTLMQMKCEVHTVAVGAAIGMACLLLAAGTKGKRFMMPHAKIMIQQPRLPSSGLLPASDVLIRAKEAMVNRDTLVKLLGQHTGNSEEFVTKTLEEHIIWTLEKA 931 RIV++G + + +VA+L++L+ +PK IYLYINS G G S GFAIYDT+ +K +HT+ G A A +LL AGTKGKRF +P+++IMI QP + G ASD+ I AK + R+ LV + + TG S E V K ++ + E+A Sbjct: 29 RIVFLGAAIDDQIANSIVAQLLFLEAENPKKDIYLYINSPG---------GSTSAGFAIYDTMQFVKPSIHTICTGMAASFAAILLLAGTKGKRFALPNSEIMIHQPSGGAQG--QASDLAITAKRILGIREKLVTVTSERTGQSPEKVAKDMDRDYFMSAEEA 181 The following BLAST results are available for this feature:
BLAST of DY263054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263054 ID=DY263054; Name=DY263054; organism=Citrus clementina; type=EST; length=1362bpback to top |