DY263061

Overview
NameDY263061
Unique NameDY263061
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1175
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6390 contig Ccv1_Contig6390:1272..2446. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY263061 vs. ExPASy Swiss-Prot
Match: SDA1_DROME (Protein SDA1 homolog OS=Drosophila melanogaster GN=Mys45A PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.776e-22
Identity = 67/155 (43.23%), Postives = 87/155 (56.13%), Query Frame = 2
Query:   95 IAVGLNVVREICLRMPLLMTDDLLQDLVLYKKSHEKAVSAAARSLITLFREVCPSLLVKKDRGRPTDPKA--RPRAFGEVSVASNVPGVELLQXXXXXXXXXXXXXXXXXXKENID---TDGDEENQFSGDAIGSEDDDSGDDNAIDEDNDTNNS 544
            +A+GLN  REIC+R PL M +DLLQDL +YK   EK+V  AARSLITL+RE  P+LL KKDRGR T+ +A  + RA+GE  V   V G E L                    E ++   +DG+      G A   E+D+  D++  DED D  NS
Sbjct:  391 MAIGLNATREICMRCPLAMGEDLLQDLAMYKTYKEKSVMMAARSLITLYREQLPALLHKKDRGRQTEAQAERKVRAYGEREVHDTVLGAEALLKDSKTIDIESEDDTDSNDGEWVNVAHSDGE-----GGGADDDEEDEDEDEDDDDEDEDEENS 540          
BLAST of DY263061 vs. ExPASy Swiss-Prot
Match: SDA1_NEMVE (Protein SDA1 homolog OS=Nematostella vectensis GN=sdad1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 3.069e-21
Identity = 62/155 (40.00%), Postives = 85/155 (54.84%), Query Frame = 2
Query:   95 IAVGLNVVREICLRMPLLMTDDLLQDLVLYKKSHEKAVSAAARSLITLFREVCPSLLVKKDRGRPTDPK--ARPRAFGEVSVASNVPGVELLQXXXXXXXXXXXXXXXXXXK--ENIDTDGDEEN----QFSGDAIGSEDDDSGDDNAIDEDNDT 535
            +AVGLN VRE+C R PL+MTD LLQDL  YK S +K+V  A++SLI LFR V P+LL KKDRG+PT+ +  ++P  +  V     +PG EL+                   +  E  D   DE+     Q S D    ++D SG++   +ED  T
Sbjct:  386 MAVGLNAVREVCQRCPLVMTDTLLQDLAQYKTSKDKSVMMASQSLIQLFRSVNPNLLHKKDRGQPTESREDSKPLDYAAVEAKDYIPGAELINYANSTIILLYATLIPDGWETDEGCDDGSDEDGWIDVQHSSDEEQEDEDPSGENQEGEEDGQT 540          
BLAST of DY263061 vs. ExPASy Swiss-Prot
Match: SDA1_XENTR (Protein SDA1 homolog OS=Xenopus tropicalis GN=sdad1 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.207e-17
Identity = 54/139 (38.85%), Postives = 78/139 (56.12%), Query Frame = 2
Query:   95 IAVGLNVVREICLRMPLLMTDDLLQDLVLYKKSHEKAVSAAARSLITLFREVCPSLLVKKDRGRPTD--PKARPRAFGEVSVASNVPGVELLQXXXXXXXXXXXXXXXXXXKENIDTDGDEENQFSGDAIGSEDDDSGD 505
            + VG+N ++E+  R PL MT++LLQDL LYK   +K VS +ARSLI LFR + P +L KK RG+PT+   +AR  A+GE+     +PG E+L+                   E   T+  EE+     A  S+DD+ G+
Sbjct:  391 MTVGINAIKELTARCPLAMTEELLQDLALYKTHKDKNVSMSARSLIQLFRSLNPEMLQKKFRGKPTEASKEARIHAYGELDAKDYIPGAEVLEV------------------EQEKTEEPEEDDGWESASLSDDDEDGE 511          
BLAST of DY263061 vs. ExPASy Swiss-Prot
Match: SDA1_SCHPO (Protein sda1 OS=Schizosaccharomyces pombe GN=sda1 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 2.059e-17
Identity = 57/152 (37.50%), Postives = 79/152 (51.97%), Query Frame = 2
Query:   95 IAVGLNVVREICLRMPLLMTDDLLQDLVLYKKSHEKAVSAAARSLITLFREVCPSLLVKKDRGRPTDPKAR---PRAFG-EVSVASNVPGVELLQXXXXXXXXXXXXXXXXXXKENIDTDGDEENQFSGDAIGSEDDDSGDDNAIDEDNDTN 538
            +  G+N +RE+C R PL MT DLLQDL  YK S +K V  A+RSLITL+REV P +L +KDRG+    + +   P  +G E++V   + G+ELL                         +GD+ + +     G   DDSG    ID D+D N
Sbjct:  415 VCAGINAIREVCARAPLAMTPDLLQDLTEYKSSKDKGVMMASRSLITLYREVAPDMLKRKDRGKLASIEMKDRTPLKYGEELNVTHGIQGLELLAQYKAEHGEE-------------GENGDDWDNWEVSEDGQNSDDSG--GWIDVDSDDN 551          
BLAST of DY263061 vs. ExPASy Swiss-Prot
Match: SDA1_XENLA (Protein SDA1 homolog OS=Xenopus laevis GN=sdad1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.973e-16
Identity = 43/93 (46.24%), Postives = 62/93 (66.67%), Query Frame = 2
Query:   95 IAVGLNVVREICLRMPLLMTDDLLQDLVLYKKSHEKAVSAAARSLITLFREVCPSLLVKKDRGRPTD--PKARPRAFGEVSVASNVPGVELLQ 367
            + VG+N ++E+  R PL MT++LLQDL  YK   +K VS +AR LI LFR + P +L KK RG+PT+   +AR  A+GE+     +PG E+L+
Sbjct:  391 MTVGINAIKEVTARCPLAMTEELLQDLAQYKTHRDKNVSMSARGLIQLFRSLNPDMLQKKFRGKPTEASKEARIHAYGELDAKDYIPGAEVLE 483          
BLAST of DY263061 vs. ExPASy Swiss-Prot
Match: SDA1_DANRE (Protein SDA1 homolog OS=Danio rerio GN=sdad1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.973e-16
Identity = 51/152 (33.55%), Postives = 82/152 (53.95%), Query Frame = 2
Query:   95 IAVGLNVVREICLRMPLLMTDDLLQDLVLYKKSHEKAVSAAARSLITLFREVCPSLLVKKDRGRPTD--PKARPRAFGEVSVASNVPGVELLQXXXXXXXXXXXXXXXXXXKENIDTDGDEENQFSGDAIGSEDDDSGDDNAIDEDNDTNNS 544
            + VG+N ++E+  R PL M++DLLQDL  YK   +K V  +AR LI LFR++ P +L +KDRGRPT+   +A+   +GE+     +PG E+L+                   E  + + DE+   S  A  S+DD+ G+   +   +D + +
Sbjct:  391 MTVGINAIKEVVARCPLSMSEDLLQDLTQYKSHKDKNVVMSARGLIQLFRDLNPKMLTRKDRGRPTESSKEAKIHKYGELEAKDYIPGAEVLE------------------AEKAEDEEDEDGWES--ASMSDDDEDGEWVNVHHSSDDDQA 522          
BLAST of DY263061 vs. ExPASy Swiss-Prot
Match: SDA1_BOVIN (Protein SDA1 homolog OS=Bos taurus GN=SDAD1 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.130e-15
Identity = 49/139 (35.25%), Postives = 76/139 (54.68%), Query Frame = 2
Query:   95 IAVGLNVVREICLRMPLLMTDDLLQDLVLYKKSHEKAVSAAARSLITLFREVCPSLLVKKDRGRPTDP--KARPRAFGEVSVASNVPGVELLQXXXXXXXXXXXXXXXXXXKENIDTDGDEENQFSGDAIGSEDDDSGD 505
            + VG+N ++EI  R PL MT++LLQDL  YK   +K V  +AR+LI LFR + P +L KK RG+PT+   +AR + +GE+     +PG E+L+                   E  + +GDE+  +   ++  E D  G+
Sbjct:  391 MTVGINAIKEITARCPLAMTEELLQDLAQYKTHKDKNVMMSARTLIQLFRTLNPQMLQKKFRGKPTEASIEARVQEYGELDAKDYIPGAEILE----------------VENEEENAEGDEDG-WESASLSDEADSDGE 512          
BLAST of DY263061 vs. ExPASy Swiss-Prot
Match: SDA1_HUMAN (Protein SDA1 homolog OS=Homo sapiens GN=SDAD1 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 1.475e-15
Identity = 50/148 (33.78%), Postives = 80/148 (54.05%), Query Frame = 2
Query:   95 IAVGLNVVREICLRMPLLMTDDLLQDLVLYKKSHEKAVSAAARSLITLFREVCPSLLVKKDRGRPTDP--KARPRAFGEVSVASNVPGVELLQXXXXXXXXXXXXXXXXXXKENIDTDGDEENQFSGDAIGSEDDDSGDDNAIDEDND 532
            + VG+N ++EI  R PL MT++LLQDL  YK   +K V  +AR+LI LFR + P +L KK RG+PT+   +AR + +GE+     +PG E+L+                  +EN + D   E+ +   ++  E+D  G+   +   +D
Sbjct:  391 MTVGINAIKEITARCPLAMTEELLQDLAQYKTHKDKNVMMSARTLIHLFRTLNPQMLQKKFRGKPTEASIEARVQEYGELDAKDYIPGAEVLE---------------VEKEENAEND---EDGWESTSLSEEEDADGEWIDVQHSSD 520          
BLAST of DY263061 vs. ExPASy Swiss-Prot
Match: SDA1_MOUSE (Protein SDA1 homolog OS=Mus musculus GN=Sdad1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.927e-15
Identity = 47/139 (33.81%), Postives = 77/139 (55.40%), Query Frame = 2
Query:   95 IAVGLNVVREICLRMPLLMTDDLLQDLVLYKKSHEKAVSAAARSLITLFREVCPSLLVKKDRGRPTDP--KARPRAFGEVSVASNVPGVELLQXXXXXXXXXXXXXXXXXXKENIDTDGDEENQFSGDAIGSEDDDSGD 505
            + VG+N ++EI  R PL MT++LLQDL  YK   +K V  +AR+LI LFR + P +L KK RG+PT+   +AR + +GE+     +PG E+L+                   E  +   D+E+ +   ++  E+++ G+
Sbjct:  391 MTVGINAIKEITARCPLAMTEELLQDLAQYKTHKDKNVMMSARTLIHLFRTLNPQMLQKKFRGKPTEASIEARIQEYGELDAKDYIPGAEVLEL------------------EKGENTEDDEDGWESASLSEEEEEDGE 511          
BLAST of DY263061 vs. ExPASy Swiss-Prot
Match: SDA1_RAT (Protein SDA1 homolog OS=Rattus norvegicus GN=Sdad1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 4.293e-15
Identity = 42/93 (45.16%), Postives = 62/93 (66.67%), Query Frame = 2
Query:   95 IAVGLNVVREICLRMPLLMTDDLLQDLVLYKKSHEKAVSAAARSLITLFREVCPSLLVKKDRGRPTDP--KARPRAFGEVSVASNVPGVELLQ 367
            + VG+N ++EI  R PL MT++LLQDL  YK   +K V  +AR+LI LFR + P +L KK RG+PT+   +AR + +GE+     +PG E+L+
Sbjct:  391 MTVGINAIKEITARCPLAMTEELLQDLAQYKTHKDKNVMMSARTLIHLFRTLNPQMLQKKFRGKPTEASIEARIQEYGELDAKDYIPGAEVLE 483          
The following BLAST results are available for this feature:
BLAST of DY263061 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
SDA1_DROME2.776e-2243.23Protein SDA1 homolog OS=Drosophila melanogaster GN... [more]
SDA1_NEMVE3.069e-2140.00Protein SDA1 homolog OS=Nematostella vectensis GN=... [more]
SDA1_XENTR1.207e-1738.85Protein SDA1 homolog OS=Xenopus tropicalis GN=sdad... [more]
SDA1_SCHPO2.059e-1737.50Protein sda1 OS=Schizosaccharomyces pombe GN=sda1 ... [more]
SDA1_XENLA2.973e-1646.24Protein SDA1 homolog OS=Xenopus laevis GN=sdad1 PE... [more]
SDA1_DANRE2.973e-1633.55Protein SDA1 homolog OS=Danio rerio GN=sdad1 PE=2 ... [more]
SDA1_BOVIN1.130e-1535.25Protein SDA1 homolog OS=Bos taurus GN=SDAD1 PE=2 S... [more]
SDA1_HUMAN1.475e-1533.78Protein SDA1 homolog OS=Homo sapiens GN=SDAD1 PE=1... [more]
SDA1_MOUSE1.927e-1533.81Protein SDA1 homolog OS=Mus musculus GN=Sdad1 PE=1... [more]
SDA1_RAT4.293e-1545.16Protein SDA1 homolog OS=Rattus norvegicus GN=Sdad1... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA10CH01RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263061 ID=DY263061; Name=DY263061; organism=Citrus clementina; type=EST; length=1175bp
CACGATCGTTCACGTACAGAGGTATAGCTGCTTCATATTTTGTTTTCAAT
GAATGACAGATTGACTTATCATTTACATTTGCTTGTTTTAGGCAATTGCT
GTTGGACTGAATGTTGTTAGGGAAATATGCTTGCGCATGCCATTGTTGAT
GACAGACGATTTGCTGCAAGATCTTGTATTATATAAGAAATCACATGAGA
AGGCAGTTTCAGCAGCTGCTCGATCACTTATAACTTTGTTCAGAGAGGTG
TGCCCTTCTTTACTGGTCAAGAAGGATCGTGGCCGCCCCACTGACCCCAA
GGCCAGGCCTAGAGCATTCGGGGAAGTCAGTGTTGCTAGCAATGTTCCTG
GTGTTGAGTTACTACAAGATGGTGATGGAAATGAATCTGCCTCTGATGGC
TCTGATGATGATAATGATAATAAAGAGAATATTGACACTGATGGTGATGA
AGAAAACCAGTTTTCTGGTGATGCTATTGGAAGTGAGGATGATGATAGTG
GAGATGACAATGCAATAGATGAAGACAATGATACTAATAATAGTATTGAA
GATGATAGTGGTGTCAGTGAAGATGATCTCGATGGTGATGACGATGAAGA
AGAGGAGTTAGAGGCAGAGGATGTTGATGAGCTTGAAGAAGGTTGTGATT
CTAAAAACAGTGAAAGTGATGCCGGGGACAGCAGTCCAGTGACCAAAGAA
TCTATGGCAAAAAAGAGGAAGTTTTCTGATTTTGATGGTCAGCTTATTGC
TGCTGACACAAGTCTTCGAGCTCTGAAGAGATTGGCAGAAGCAAAAATAG
GCTTTGTGTCCTCTGACTCAAGTGATGGCATTCTTTCTAATGAAAAATTC
CCGAGGATCAAAGAACTAAAGGCAAAGAACGAAACTAAAATTGCTTTGGC
TCACCAAGGGTTTAAGGTTCCAAGTTCTGATCAACTGAGCATTAAGCTTG
TGGACCCCGTCAAGCTTGAACCTCATGTACGGCCAAAGTTAACAAAAAAG
AAAAGGCTTGCATAATAAAAAACAGGGAGGGAAAACGAAAGGAAATTAAA
TGGCTCCGGCCTGCTTTTAACAAAAAAAAAACCGGGGGGTTTTGGACAAT
TCTCTAAAAAAAAAACAAAAAAGGCTTTTCCCCCCTTTCTTCCAAAAAAA
AACCCAAAATTGCCCAAAAAACCCC
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