Integration of trinucleotide microsatellites into a linkage map of Citrus

Publication Overview
TitleIntegration of trinucleotide microsatellites into a linkage map of Citrus
AuthorsKijas J, Thomas M, Fowler J, Roose M
TypeJournal Article
Journal NameTheoretical and applied genetics
Volume94
Issue5
Year1997
Page(s)701-706
CitationKijas J, Thomas M, Fowler J, Roose M. Integration of trinucleotide microsatellites into a linkage map of Citrus. Theoretical and applied genetics. 1997 Apr; 94(5):701-706.

Abstract

We report the successful assignment of the first seven microsatellite markers to the Citrus RFLP and isozyme map. A total of 14 microsatellite primer pairs were developed and tested for amplification and product-length polymorphism within a population of plants previously used for linkage-map construction. In each case, the successfully assigned microsatellite mapped to the termini of a different linkage group indicating a widespread distribution throughout the genome. Analysis of allele segregation revealed that two of nine microsatellites displayed a significant deviation from expected ratios (P > 0.5). This was compared with other marker types within Citrus and a similar proportion of skewed loci was also found to be present. The analysis of two markers was complicated by the non-amplification of an inherited null allele within the mapping population. The successful integration of microsatellites into the genetic map of Citrus demonstrates the utility of this marker type for genetic analysis within wide intergeneric plant crosses.
Featuremaps
This publication contains information about 1 maps:
Map Name
Citrus-Sacaton/Troyer-RIL-1997
Stocks
This publication contains information about 3 stocks:
Stock NameUniquenameType
SacatonSacatonaccession
TroyerTroyeraccession
Sacaton/TroyerSacaton/Troyerpopulation
Features
This publication contains information about 55 features:
Feature NameUniquenameType
TAA1TAA1genetic_marker
TAA15TAA15genetic_marker
TAA27TAA27genetic_marker
TAA33TAA33genetic_marker
TAA41TAA41genetic_marker
TAA45TAA45genetic_marker
TAA52TAA52genetic_marker
CAC23CAC23genetic_marker
CAGG9CAGG9genetic_marker
TAA3TAA3genetic_marker
CAC15CAC15genetic_marker
CAC19CAC19genetic_marker
CAC33CAC33genetic_marker
CAC39CAC39genetic_marker
Mdh-1Mdh-1genetic_marker
Got-1Got-1genetic_marker
pRLc094pRLc094genetic_marker
pRLc103pRLc103genetic_marker
pgCIT048pgCIT048genetic_marker
SkdhSkdhgenetic_marker
pRLc040pRLc040genetic_marker
pRLc060pRLc060genetic_marker
pRLc101pRLc101genetic_marker
Mdh-2Mdh-2genetic_marker
pRLc032bpRLc032bgenetic_marker

Pages

Properties
Additional details for this publication include:
Property NameValue
Publication TypeJournal Article
Publication Date1997 Apr
Language Abbreng
Journal AbbreviationTheor. appl. genet.
KeywordsCitroncirus webberi, microsatellite repeats, genetic markers, chromosome mapping, linkage groups, alleles, restriction fragment length polymorphism, isozymes, segregation, citrus paradisi x poncirus trifoliata
Cross References
This publication is also available in the following databases:
DatabaseAccession
AGL: USDA National Agricultural LibraryAGL:3245991