gene-KPL70_005107-mRNA4
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of gene-KPL70_005107-mRNA4 vs. DB:SwissProt
Match: P4H3_ARATH (Probable prolyl 4-hydroxylase 3 OS=Arabidopsis thaliana OX=3702 GN=P4H3 PE=2 SV=1) HSP 1 Score: 458.373 bits (1178), Expect = 2.460e-163 Identity = 227/287 (79.09%), Postives = 260/287 (90.59%), Query Frame = 1 Query: 1 MVKLRHSRLQAKKWSTLTLVLSXXXXXXXXXXXXXXXGIFYIPIGDDDSPPNDLTSFRRRAFEKRSGIAEEKGEQWTEIVAWEPRAFVYHNFLSTAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQDRIIRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMHVHEYK 861 M KLRHSR QA+KWSTL LVL MLFMLTIVLLMLLA G+F +PI +D+S P DL+ FRR A E+ G+ + +G+QWTE+++WEPRAFVYHNFLS ECEYLI LAKP+MVKSTVVDS+TG+SKDSRVRTSSGTFL+RG+D+II+ IEKRIAD+TFIP +HGEG+QVLHYE GQKY+ HYDYF+DEFNTKNGGQRMAT+LMYLSDVEEGGETVFPAAN NF+SV W+NELSECGK+GLSVKP+ GDALLFWSMRPDATLDP+SLHGGCPVIRGNKWS+TKWMHV EYK Sbjct: 1 MAKLRHSRFQARKWSTLMLVLFMLFMLTIVLLMLLAFGVFSLPINNDESSPIDLSYFRRAATERSEGLGK-RGDQWTEVLSWEPRAFVYHNFLSKEECEYLISLAKPHMVKSTVVDSETGKSKDSRVRTSSGTFLRRGRDKIIKTIEKRIADYTFIPADHGEGLQVLHYEAGQKYEPHYDYFVDEFNTKNGGQRMATMLMYLSDVEEGGETVFPAANMNFSSVPWYNELSECGKKGLSVKPRMGDALLFWSMRPDATLDPTSLHGGCPVIRGNKWSSTKWMHVGEYK 286
BLAST of gene-KPL70_005107-mRNA4 vs. DB:SwissProt
Match: P4H10_ARATH (Probable prolyl 4-hydroxylase 10 OS=Arabidopsis thaliana OX=3702 GN=P4H10 PE=3 SV=1) HSP 1 Score: 402.905 bits (1034), Expect = 1.686e-141 Identity = 200/289 (69.20%), Postives = 238/289 (82.35%), Query Frame = 1 Query: 1 MVKLRHSRLQAKKWSTLTLVLSXXXXXXXXXXXXXXXGIFYIPIGD-DDSPPNDLTSFRRRAFEKRSGIAEEKGEQWTEIVAWEPRAFVYHNFLSTAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQDRIIRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMHVHEYKA 864 M + R+ R A+K S TLV ++L M T V+L+LLA GI +P + S NDLTS R+ + RSG + K E+W EI++WEPRA VYHNFL+ EC+YLI+LAKP+M KSTVVD KTG+S DSRVRTSSGTFL RG+D+ IR IEKRI+DFTFIP+EHGEG+QVLHYE+GQKY+ HYDYF+DE+NT+NGGQR+AT+LMYLSDVEEGGETVFPAA N+++V WWNELSECGK GLSVKPK GDALLFWSM PDATLDPSSLHGGC VI+GNKWS+TKW+ VHEYK Sbjct: 2 MARPRNHRPSARKSSHSTLVFAVLIMSTFVILILLAFGILSVPSNNAGSSKANDLTSIVRKTLQ-RSGEDDSKNERWVEIISWEPRASVYHNFLTKEECKYLIELAKPHMEKSTVVDEKTGKSTDSRVRTSSGTFLARGRDKTIREIEKRISDFTFIPVEHGEGLQVLHYEIGQKYEPHYDYFMDEYNTRNGGQRIATVLMYLSDVEEGGETVFPAAKGNYSAVPWWNELSECGKGGLSVKPKMGDALLFWSMTPDATLDPSSLHGGCAVIKGNKWSSTKWLRVHEYKV 289
BLAST of gene-KPL70_005107-mRNA4 vs. DB:SwissProt
Match: P4H5_ARATH (Prolyl 4-hydroxylase 5 OS=Arabidopsis thaliana OX=3702 GN=P4H5 PE=2 SV=1) HSP 1 Score: 385.956 bits (990), Expect = 9.316e-135 Identity = 175/242 (72.31%), Postives = 209/242 (86.36%), Query Frame = 1 Query: 139 DDSPPNDLTSFRRRAFEKRSGIAEEKGEQWTEIVAWEPRAFVYHNFLSTAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQDRIIRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMHVHEYKA 864 + S NDLT+ R++ E SG E GE+W E+++WEPRA VYHNFL+ ECE+LI LAKP MVKSTVVD KTG SKDSRVRTSSGTFL+RG D ++ IEKRI+DFTFIP+E+GEG+QVLHY+VGQKY+ HYDYFLDEFNTKNGGQR+AT+LMYLSDV++GGETVFPAA N ++V WWNELS+CGK+GLSV PK+ DALLFW+MRPDA+LDPSSLHGGCPV++GNKWS+TKW HVHE+K Sbjct: 51 NSSKTNDLTNIVRKS-ETSSGDEEGNGERWVEVISWEPRAVVYHNFLTNEECEHLISLAKPSMVKSTVVDEKTGGSKDSRVRTSSGTFLRRGHDEVVEVIEKRISDFTFIPVENGEGLQVLHYQVGQKYEPHYDYFLDEFNTKNGGQRIATVLMYLSDVDDGGETVFPAARGNISAVPWWNELSKCGKEGLSVLPKKRDALLFWNMRPDASLDPSSLHGGCPVVKGNKWSSTKWFHVHEFKV 291
BLAST of gene-KPL70_005107-mRNA4 vs. DB:SwissProt
Match: P4H8_ARATH (Probable prolyl 4-hydroxylase 8 OS=Arabidopsis thaliana OX=3702 GN=P4H8 PE=3 SV=1) HSP 1 Score: 365.155 bits (936), Expect = 1.719e-126 Identity = 171/252 (67.86%), Postives = 205/252 (81.35%), Query Frame = 1 Query: 112 GIFYIPIGDDDSP-PNDLTSFRRRAFEKRSGIAEE--KGEQWTEIVAWEPRAFVYHNFLSTAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQDRIIRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMHVHEY 858 GIF +P + S P DLT+ + E+ S EE G++W E+++WEPRAFVYHNFL+ ECE+LI LAKP M+KS VVD KTG+S DSRVRTSSGTFL RG D I+ IE RI+DFTFIP E+GEG+QVLHYEVGQ+Y+ H+DYF DEFN + GGQR+AT+LMYLSDV+EGGETVFPAA N + V WW+ELS+CGK+GLSV PK+ DALLFWSM+PDA+LDPSSLHGGCPVI+GNKWS+TKW HVHEY Sbjct: 38 GIFSLPSTNKTSSMPMDLTTIVQTIQERESFGDEEDGNGDRWLEVISWEPRAFVYHNFLTNEECEHLISLAKPSMMKSKVVDVKTGKSIDSRVRTSSGTFLNRGHDEIVEEIENRISDFTFIPPENGEGLQVLHYEVGQRYEPHHDYFFDEFNVRKGGQRIATVLMYLSDVDEGGETVFPAAKGNVSDVPWWDELSQCGKEGLSVLPKKRDALLFWSMKPDASLDPSSLHGGCPVIKGNKWSSTKWFHVHEY 289
BLAST of gene-KPL70_005107-mRNA4 vs. DB:SwissProt
Match: P4H4_ARATH (Probable prolyl 4-hydroxylase 4 OS=Arabidopsis thaliana OX=3702 GN=P4H4 PE=2 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 5.313e-83 Identity = 120/209 (57.42%), Postives = 158/209 (75.60%), Query Frame = 1 Query: 238 VAWEPRAFVYHNFLSTAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQDRIIRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWN--ELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMHVHEY 858 V+ +PRAFVY FL+ EC++++ LAK + +S V D+ +G+SK S VRTSSGTF+ +G+D I+ GIE +I+ +TF+P E+GE IQVL YE GQKYDAH+DYF D+ N GG RMAT+LMYLS+V +GGETVFP A V N +LS+C K+G++VKP++GDALLF+++ PDA DP SLHGGCPVI G KWSATKW+HV + Sbjct: 40 VSSKPRAFVYEGFLTELECDHMVSLAKASLKRSAVADNDSGESKFSEVRTSSGTFISKGKDPIVSGIEDKISTWTFLPKENGEDIQVLRYEHGQKYDAHFDYFHDKVNIVRGGHRMATILMYLSNVTKGGETVFPDAEIPSRRVLSENKEDLSDCAKRGIAVKPRKGDALLFFNLHPDAIPDPLSLHGGCPVIEGEKWSATKWIHVDSF 248
BLAST of gene-KPL70_005107-mRNA4 vs. DB:SwissProt
Match: P4H2_ARATH (Prolyl 4-hydroxylase 2 OS=Arabidopsis thaliana OX=3702 GN=P4H2 PE=1 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 7.086e-79 Identity = 114/209 (54.55%), Postives = 158/209 (75.60%), Query Frame = 1 Query: 238 VAWEPRAFVYHNFLSTAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQDRIIRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAAN--ANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMHVHEY 858 V+ +PRAFVY FL+ EC++LI LAK + +S V D+ G+S+ S VRTSSGTF+ +G+D I+ GIE +++ +TF+P E+GE +QVL YE GQKYDAH+DYF D+ N GG R+AT+L+YLS+V +GGETVFP A + + ++LS+C K+G++VKPK+G+ALLF++++ DA DP SLHGGCPVI G KWSATKW+HV + Sbjct: 41 VSSKPRAFVYEGFLTDLECDHLISLAKENLQRSAVADNDNGESQVSDVRTSSGTFISKGKDPIVSGIEDKLSTWTFLPKENGEDLQVLRYEHGQKYDAHFDYFHDKVNIARGGHRIATVLLYLSNVTKGGETVFPDAQEFSRRSLSENKDDLSDCAKKGIAVKPKKGNALLFFNLQQDAIPDPFSLHGGCPVIEGEKWSATKWIHVDSF 249
BLAST of gene-KPL70_005107-mRNA4 vs. DB:SwissProt
Match: P4H7_ARATH (Probable prolyl 4-hydroxylase 7 OS=Arabidopsis thaliana OX=3702 GN=P4H7 PE=2 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 1.996e-77 Identity = 109/208 (52.40%), Postives = 154/208 (74.04%), Query Frame = 1 Query: 238 VAWEPRAFVYHNFLSTAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQDRIIRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMHVHEYK 861 ++W PR F+Y FLS EC++ I LAK + KS V D+ +G+S +S VRTSSG FL + QD I+ +E ++A +TF+P E+GE +Q+LHYE GQKY+ H+DYF D+ N + GG R+AT+LMYLS+VE+GGETVFP T ++ + +EC KQG +VKP++GDALLF+++ P+AT D +SLHG CPV+ G KWSAT+W+HV ++ Sbjct: 59 LSWTPRVFLYEGFLSDEECDHFIKLAKGKLEKSMVADNDSGESVESEVRTSSGMFLSKRQDDIVSNVEAKLAAWTFLPEENGESMQILHYENGQKYEPHFDYFHDQANLELGGHRIATVLMYLSNVEKGGETVFPMWKGKATQLK-DDSWTECAKQGYAVKPRKGDALLFFNLHPNATTDSNSLHGSCPVVEGEKWSATRWIHVKSFE 265
BLAST of gene-KPL70_005107-mRNA4 vs. DB:SwissProt
Match: P4H6_ARATH (Probable prolyl 4-hydroxylase 6 OS=Arabidopsis thaliana OX=3702 GN=P4H6 PE=2 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 9.230e-75 Identity = 111/208 (53.37%), Postives = 152/208 (73.08%), Query Frame = 1 Query: 238 VAWEPRAFVYHNFLSTAECEYLIDLAKPYMVKSTVV-DSKTGQSKDSRVRTSSGTFLKRGQDRIIRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWMHVHEY 858 ++W PRAF+Y FLS EC++LI LAK + KS VV D +G+S+DS VRTSSG FL + QD I+ +E ++A +TF+P E+GE +Q+LHYE GQKYD H+DYF D+ + GG R+AT+LMYLS+V +GGETVFP ++ + S+C KQG +VKP++GDALLF+++ + T DP+SLHG CPVI G KWSAT+W+HV + Sbjct: 35 LSWTPRAFLYKGFLSDEECDHLIKLAKGKLEKSMVVADVDSGESEDSEVRTSSGMFLTKRQDDIVANVEAKLAAWTFLPEENGEALQILHYENGQKYDPHFDYFYDKKALELGGHRIATVLMYLSNVTKGGETVFPNWKGKTPQLK-DDSWSKCAKQGYAVKPRKGDALLFFNLHLNGTTDPNSLHGSCPVIEGEKWSATRWIHVRSF 241
BLAST of gene-KPL70_005107-mRNA4 vs. DB:SwissProt
Match: P4H1_ARATH (Prolyl 4-hydroxylase 1 OS=Arabidopsis thaliana OX=3702 GN=P4H1 PE=1 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 3.645e-69 Identity = 115/209 (55.02%), Postives = 138/209 (66.03%), Query Frame = 1 Query: 232 EIVAWEPRAFVYHNFLSTAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQDR--IIRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECG---KQGLSVKPKRGDALLFWSMRPDATLDPSSLHGGCPVIRGNKWSATKWM 843 E+V+W PR V H+FLS ECEYL +A+P + STVVD KTG+ S VRTSSG FL + II+ IEKRIA F+ +P E+GE IQVL YE Q Y H+DYF D FN K GGQR+AT+LMYL+D EGGET FP A + CG +G+SVKP +GDA+LFWSM D DP S+HGGC V+ G KWSATKWM Sbjct: 78 EVVSWSPRIIVLHDFLSPEECEYLKAIARPRLQVSTVVDVKTGKGVKSDVRTSSGMFLTHVERSYPIIQAIEKRIAVFSQVPAENGELIQVLRYEPQQFYKPHHDYFADTFNLKRGGQRVATMLMYLTDDVEGGETYFPLAGDGDCT---------CGGKIMKGISVKPTKGDAVLFWSMGLDGQSDPRSIHGGCEVLSGEKWSATKWM 277
BLAST of gene-KPL70_005107-mRNA4 vs. DB:SwissProt
Match: P4H11_ARATH (Probable prolyl 4-hydroxylase 11 OS=Arabidopsis thaliana OX=3702 GN=P4H11 PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 7.628e-67 Identity = 105/201 (52.24%), Postives = 140/201 (69.65%), Query Frame = 1 Query: 217 GEQWTEIVAWEPRAFVYHNFL--------STAECEYLIDLAKPYMVKSTVVDSKTGQSKDSRVRTSSGTFLKRGQDRIIRGIEKRIADFTFIPMEHGEGIQVLHYEVGQKYDAHYDYFLDEFNTKNGGQRMATLLMYLSDVEEGGETVFPAANANFTSVRWWNELSECGKQGLSVKPKRGDALLFWSMRPDATLDPSSLHG 795 E+W E++ EPRAFVYHNFL + EC++LI LAKP M +S V ++ TG ++S RTSSGTF++ G D+I++ IEKRI++FTFIP E+GE +QV++YEVGQK++ H+D F QR+AT+LMYLSDV++GGETVFP A + K+G+SV+PK+GDALLFWSMRPD + DPSS HG Sbjct: 84 NERWLEVITKEPRAFVYHNFLALFFKICKTNEECDHLISLAKPSMARSKVRNALTGLGEESSSRTSSGTFIRSGHDKIVKEIEKRISEFTFIPQENGETLQVINYEVGQKFEPHFDGF----------QRIATVLMYLSDVDKGGETVFPEAKGIKS------------KKGVSVRPKKGDALLFWSMRPDGSRDPSSKHG 262 The following BLAST results are available for this feature:
BLAST of gene-KPL70_005107-mRNA4 vs. DB:SwissProt
Analysis Date: 2023-04-12 (Citrus sinensis cv. Valencia DVS_A genome v1.0) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro: C. sinensis DVS_A v1.0
Date Performed: 2023-04-20 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >gene-KPL70_005107-mRNA4_Citrus_sinensis_DVS_A_v1 ID=gene-KPL70_005107-mRNA4_Citrus_sinensis_DVS_A_v1; Name=gene-KPL70_005107-mRNA4; organism=Citrus sinensis; type=mRNA; length=867bpback to top protein sequence of gene-KPL70_005107-mRNA4_Citrus_sinensis_DVS_A_v1 >gene-KPL70_005107-mRNA4_Citrus_sinensis_DVS_A_v1 ID=gene-KPL70_005107-mRNA4_Citrus_sinensis_DVS_A_v1; Name=gene-KPL70_005107-mRNA4_Citrus_sinensis_DVS_A_v1; organism=Citrus sinensis; type=polypeptide; length=288bpback to top mRNA from alignment at CM039162.1_Chr2_DVS_A:29922965..29925185+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=2221bp; location=Sequence derived from: CM039162.1_Chr2_DVS_A:29922965..29925185+ (Citrus sinensisback to top Coding sequence (CDS) from alignment at CM039162.1_Chr2_DVS_A:29922965..29925185+ >gene-KPL70_005107-mRNA4_Citrus_sinensis_DVS_A_v1 ID=gene-KPL70_005107-mRNA4_Citrus_sinensis_DVS_A_v1; Name=gene-KPL70_005107-mRNA4; organism=Citrus sinensis; type=CDS; length=867bp; location=Sequence derived from: CM039162.1_Chr2_DVS_A:29922965..29925185+ (Citrus sinensisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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