gene-KPL71_018642-mRNA1
Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs
Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of gene-KPL71_018642-mRNA1 vs. DB:SwissProt
Match: TPRL2_ERYCB (Tropinone reductase-like 2 OS=Erythroxylum coca OX=289672 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 1.627e-61 Identity = 121/198 (61.11%), Postives = 152/198 (76.77%), Query Frame = 1 Query: 61 YYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGF-VSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGL 651 + RL+G+VAIITGGASGIGA A+LFH+NGAKVVIAD+QD+LGQALA KLG + CYIHCDVS E EVINLVDTTVAK+G+LDI+ N+ +E +G VS++++ KSDL+RLL+VN G FL AKHA RVMV +R+GCIL+ ++ CT I GL + Y SK G+ GL K+L ELG+YGIRV+C+S YGL Sbjct: 8 HKRLEGKVAIITGGASGIGACTAELFHENGAKVVIADIQDDLGQALATKLGGK-ACYIHCDVSKEDEVINLVDTTVAKYGRLDIMFNNAGIIEGQGLPVSVVESEKSDLDRLLSVNLGGAFLGAKHATRVMVQQRKGCILF----TSSVCTSIAGL---SGHAYAASKSGVCGLAKNLTPELGKYGIRVNCIS-PYGL 196
BLAST of gene-KPL71_018642-mRNA1 vs. DB:SwissProt
Match: TPRL1_ERYCB (Tropinone reductase-like 1 OS=Erythroxylum coca OX=289672 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 7.559e-61 Identity = 121/198 (61.11%), Postives = 152/198 (76.77%), Query Frame = 1 Query: 61 YYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGF-VSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGL 651 + RL+G+VAIITGGASGIGA A+LFH+NGAKVVIAD+QD+LGQALA KLG + CYIHCDVS E +VINLVDTTVAK+G+LDI+ N+ +E +G VS++++ KSDL+RLL+VN G FL AKHA RVMV +R+GCIL+T+ CT I GL + Y SK G+ GL K+L ELG+YGIRV+C+S YGL Sbjct: 8 HKRLEGKVAIITGGASGIGACTAELFHENGAKVVIADIQDDLGQALATKLGGK-ACYIHCDVSKEDDVINLVDTTVAKYGRLDIMFNNAGIIEGQGLPVSVVESEKSDLDRLLSVNLGGAFLGAKHATRVMVQQRKGCILFTSSL----CTSIAGL---SGHAYAASKSGVCGLAKNLTPELGKYGIRVNCIS-PYGL 196
BLAST of gene-KPL71_018642-mRNA1 vs. DB:SwissProt
Match: SILD_PODPE (Secoisolariciresinol dehydrogenase (Fragment) OS=Podophyllum peltatum OX=35933 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 3.236e-41 Identity = 94/195 (48.21%), Postives = 130/195 (66.67%), Query Frame = 1 Query: 55 SSYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDV-CYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 636 SS RLQ +VAIITGGA GIG + A+LF + GAKVVIAD+ D+ GQ + + +G DV ++HCDV+ + +V NLVDTT+AK GKLDI+ + L + SIL+ D +R++ +N G FLVAKHAARVM+P ++G I++ ++ T EG+ ++ Y +K +LGL SL ELG YGIRV+CVS Sbjct: 9 SSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPY-SILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVF--TASISSFTAGEGVSHV----YTATKHAVLGLTTSLCTELGEYGIRVNCVS 196
BLAST of gene-KPL71_018642-mRNA1 vs. DB:SwissProt
Match: SDH_SINHE (Secoisolariciresinol dehydrogenase OS=Sinopodophyllum hexandrum OX=93608 GN=SDH PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 9.030e-41 Identity = 93/195 (47.69%), Postives = 131/195 (67.18%), Query Frame = 1 Query: 55 SSYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDV-CYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 636 SS RLQ +VAIITGGA GIG + A+LF + GAKVVIAD+ D+ GQ + + +G DV ++HCDV+ + +V NLVDTT+AK GKLDI+ + L + SIL+ D +R++ +N G FLVAKHAARVM+P ++G I++ ++ T EG+ ++ Y +K +LGL SL ELG++GIRV+CVS Sbjct: 9 SSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADISDDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPY-SILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVF--TASISSFTAGEGVSHV----YTATKHAVLGLTTSLCTELGQHGIRVNCVS 196
BLAST of gene-KPL71_018642-mRNA1 vs. DB:SwissProt
Match: SILD_FORIN (Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia OX=55183 PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.280e-40 Identity = 95/196 (48.47%), Postives = 131/196 (66.84%), Query Frame = 1 Query: 67 RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGL 651 RL+G+VA+ITGGASGIG + A+LF ++GAKV IADVQD LG ++ + +G + YIHCDV+NE V N VD TV+ +GKLDI+ N+G + R I+D K+D ER+ +VN G FL KHAARVM+P R G I+ T +T + ++ Y SK +LGL ++LA ELG++GIRV+C+S +GL Sbjct: 14 RLEGKVALITGGASGIGETTAKLFSQHGAKVAIADVQDELGHSVVEAIGTSNSTYIHCDVTNEDGVKNAVDNTVSTYGKLDIMFSNAGISDPNR--PRIIDNEKADFERVFSVNVTGVFLCMKHAARVMIPARSGNIISTASLSST-------MGGGSSHAYCGSKHAVLGLTRNLAVELGQFGIRVNCLS-PFGL 199
BLAST of gene-KPL71_018642-mRNA1 vs. DB:SwissProt
Match: SDR3B_ARATH (Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana OX=3702 GN=SDR3b PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 1.294e-34 Identity = 93/194 (47.94%), Postives = 123/194 (63.40%), Query Frame = 1 Query: 58 SYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 636 S RL G++ IITGGASGIGA + +LF ++GA+VVI DVQD LGQ +A +G Y HCDV+NE EV N V TV K+GKLD+L ++ +E FVSILD ++L+R +A+N G KHAAR MV + RG I+ T+ EI G + Y SK G+LGL+KS + LG+YGIRV+ V+ Sbjct: 2 SGKRLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYYHCDVTNETEVENAVKFTVEKYGKLDVLFSNAGVIEP--FVSILDLNLNELDRTIAINLRGTAAFIKHAARAMVEKGIRGSIV----CTTSVAAEIAGTA---PHGYTTSKHGLLGLIKSASGGLGKYGIRVNGVA 186
BLAST of gene-KPL71_018642-mRNA1 vs. DB:SwissProt
Match: ZERSY_ZINZE (Zerumbone synthase OS=Zingiber zerumbet OX=311405 GN=ZSD1 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.610e-33 Identity = 85/191 (44.50%), Postives = 124/191 (64.92%), Query Frame = 1 Query: 67 RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLG-HQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 636 RL+G+VA++TGGASGIG S A+LF ++GAK+ I DVQD LGQ ++ +LG CY HCDV+ E +V VD T K+G +DI+VN+ + + I D ++ +++ +N G FL KHAAR+M+P+ +G I+ + + + I G P Y G +K ++GL KS+AAELGR+GIRV+CVS Sbjct: 2 RLEGKVALVTGGASGIGESIARLFIEHGAKICIVDVQDELGQQVSQRLGGDPHACYFHCDVTVEDDVRRAVDFTAEKYGTIDIMVNN-AGITGDKVIDIRDADFNEFKKVFDINVNGVFLGMKHAARIMIPKMKGSIV----SLASVSSVIAGAG--PHGYTG-AKHAVVGLTKSVAAELGRHGIRVNCVS 184
BLAST of gene-KPL71_018642-mRNA1 vs. DB:SwissProt
Match: MOMAS_ORYSJ (Momilactone A synthase OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0179200 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.112e-33 Identity = 89/190 (46.84%), Postives = 123/190 (64.74%), Query Frame = 1 Query: 67 RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 636 +L G+VA+ITGGASGIGA A+LF K+GA+VV+AD+QD LG +L +LG Y+HCDV+NE +V VD VA+FGKLD++ N+ + + + K D ER+LAVN +G FL KHAARVM P RRG I+ T ++ + ++ Y SK ++G ++ A ELGR+GIRV+CVS Sbjct: 14 KLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDASSYVHCDVTNEGDVAAAVDHAVARFGKLDVMFNN-AGVSGPPCFRMSECTKEDFERVLAVNLVGPFLGTKHAARVMAPARRGSIISTASLSSS-------VSGAASHAYTTSKHALVGFTENAAGELGRHGIRVNCVS 195
BLAST of gene-KPL71_018642-mRNA1 vs. DB:SwissProt
Match: SDR3A_ARATH (Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana OX=3702 GN=SDR3a PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.065e-30 Identity = 106/261 (40.61%), Postives = 139/261 (53.26%), Query Frame = 1 Query: 58 SYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-RRGCILYXXXXXXXACTEIEGLCNIPANY-YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLXXXXXXXXXXXXXL---YNMAK---------------------DDDTSYVGKQNLLVNGGF 762 S RL G++AIITGGASGIGA A +LF +GAKVVI D Q+ LGQ +A +G + CDV+NE+EV N V TV K+GKLD+L ++ +E G S LD +R +AVN G KHAAR MV + RG I+ T+ +EI G P + Y SK +LGLVKS LG+YGIRV+ V+ Y +A A + Y+ A DD++YV QNL V+GG+ Sbjct: 2 SGLRLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFYRCDVTNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQPG--SFLDLNLEQFDRTMAVNVRGAAAFIKHAARAMVEKGTRGSIV----CTTSVASEIGG----PGPHAYTASKHALLGLVKSACGGLGKYGIRVNGVA-PYAVATAINSRDEETVRMVEEYSAATGILKGVVLKARHVAEAALFLASDDSAYVSGQNLAVDGGY 251
BLAST of gene-KPL71_018642-mRNA1 vs. DB:SwissProt
Match: SDR3C_ARATH (Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana OX=3702 GN=SDR3c PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 1.817e-28 Identity = 98/259 (37.84%), Postives = 135/259 (52.12%), Query Frame = 1 Query: 58 SYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-RRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCV----------SH-------------TYGLXXXXXXXXXXXXXLYNMAKDDDTSYVGKQNLLVNGGF 762 S RL+G++ IITGGASGIGA AA+LF +GAKVVI DVQ+ LGQ +A +G + CDV+NE EV + V TV K GKLD+L ++ LE S LD +R++AVN G KHAAR MV + RG I+ T + + Y SK G++GL++S +LG+YGIRV+ V SH G+ + + A + DD++Y+ QNL V+GG+ Sbjct: 2 SGLRLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFYRCDVTNETEVEDAVKFTVEKHGKLDVLFSNAGVLEP--LESFLDFDLERFDRIMAVNVRGAAAFIKHAARAMVEKGTRGSIV--------CTTSVSAEIGGGHHGYTASKHGLVGLIRSACGDLGKYGIRVNGVAPYAVATPMTSHDEVTGKQLEDYFDAKGILKGMVLKASHVAQVALFLASDDSAYISGQNLAVDGGY 250 The following BLAST results are available for this feature:
BLAST of gene-KPL71_018642-mRNA1 vs. DB:SwissProt
Analysis Date: 2023-04-17 (BLAST: C. sinensis DVS_B v1.0) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterPro: C. sinensis DVS_B v1.0
Date Performed: 2023-04-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >gene-KPL71_018642-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018642-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018642-mRNA1; organism=Citrus sinensis; type=mRNA; length=768bpback to top protein sequence of gene-KPL71_018642-mRNA1_Citrus_sinensis_DVS_B_v1 >gene-KPL71_018642-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018642-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018642-mRNA1_Citrus_sinensis_DVS_B_v1; organism=Citrus sinensis; type=polypeptide; length=255bpback to top mRNA from alignment at CM039175.1_Chr6_DVS_B:19913495..19914262+ Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=768bp; location=Sequence derived from: CM039175.1_Chr6_DVS_B:19913495..19914262+ (Citrus sinensisback to top Coding sequence (CDS) from alignment at CM039175.1_Chr6_DVS_B:19913495..19914262+ >gene-KPL71_018642-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018642-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018642-mRNA1; organism=Citrus sinensis; type=CDS; length=768bp; location=Sequence derived from: CM039175.1_Chr6_DVS_B:19913495..19914262+ (Citrus sinensisback to top |