gene-KPL71_018527-mRNA1 | Citrus Genome Database

Transcript Overview


Name	gene-KPL71_018527-mRNA1
Unique Name	gene-KPL71_018527-mRNA1_Citrus_sinensis_DVS_B_v1
Type	mRNA
Organism	Citrus sinensis (Sweet orange)
Sequence length	1298
Product	serine/threonine-protein phosphatase PP2A-4 catalytic subunit

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Citrus sinensis cv. Valencia DVS_B genome v1.0	2023-04-13
BLAST: C. sinensis DVS_B v1.0	2023-04-17
InterPro: C. sinensis DVS_B v1.0	2023-04-17

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
caudvbL154	Citrus australis genome v1.0 (UQ)	Citrus australis
ccdvbL100	Citrus clementina genome v1.0 (JGI)	Citrus clementina
cledvbL085	Citrus limon cv. Eureka genome v1.0	Citrus limon
cledvbL113	Citrus limon cv. Eureka genome v1.0	Citrus limon
cmdvbL263	Citrus maxima (C. grandis) genome v1.0	Citrus maxima
csdvbL117	Citrus sinensis genome v1.1 (JGI)	Citrus sinensis
dvadvbL304	Citrus sinensis cv. Valencia DVS_A genome v1.0	Citrus sinensis
dvbswoR187	Citrus sinensis Di-Haploid Sweet Orange (DHSO) v3.0 (HZAU)	Citrus sinensis
dvbswoR196	Citrus sinensis Di-Haploid Sweet Orange (DHSO) v3.0 (HZAU)	Citrus sinensis
dvbfhR440	Fortunella hindsii genome v1.0	Fortunella hindsii
dvbfhR471	Fortunella hindsii genome v1.0	Fortunella hindsii
dvbzkR322	Poncirus trifoliata acc. ZK8 v1.0 (HZAU)	Poncirus trifoliata
dvbzkR336	Poncirus trifoliata acc. ZK8 v1.0 (HZAU)	Poncirus trifoliata
csidvbL352	Citrus sinensis Valencia genome v1.0 (HZAU)	Citrus sinensis
dvbswR287	Citrus sinensis Valencia genome v2.0 (HZAU)	Citrus sinensis
cmjdvbL215	Citrus maxima Cupi Majiayou v1.0 genome	Citrus maxima
dvbfhsR376	Fortunella hindsii S3y-45 genome v2.0	Fortunella hindsii
dvbfhsR384	Fortunella hindsii S3y-45 genome v2.0	Fortunella hindsii
csndvbL314	Citrus sinensis cv. Newhall v1.0 genome	Citrus sinensis
csndvbL337	Citrus sinensis cv. Newhall v1.0 genome	Citrus sinensis
dvbminR584	Citrus inodora CRC3784 genome v1.0	Citrus inodora
dvbminR610	Citrus inodora CRC3784 genome v1.0	Citrus inodora
dvbeglR0910	Citrus glauca CRC3463 genome v1	Citrus glauca
ccrdvbL037	Citrus australasica CRC3672 genome v1	Citrus australasica
ccrdvbL136	Citrus australasica CRC3672 genome v1	Citrus australasica
ccrdvbL236	Citrus australasica CRC3672 genome v1	Citrus australasica
ccrdvbL325	Citrus australasica CRC3672 genome v1	Citrus australasica
csgdvbL088	Citrus sinensis cv. Gannanzao v1.0 genome	Citrus sinensis
abhdvbL178	Atalantia buxifolia cv. HKC v2.0 genome	Atalantia buxifolia
cizdvbL101	Citrus ichangensis cv. ZGYCC v2.0 genome	Citrus ichangensis
clldvbL195	Citrus linwuensis cv. LW genome v1.0	Citrus linwuensis
cmxdvbL287	Citrus maxima cv. XGF genome v1.0	Citrus maxima
cmmdvbL321	Citrus mangshanensis cv. MSYG genome v1.0	Citrus mangshanensis
caadvbL349	Citrus australasica cv. AZM genome v1.0	Citrus australasica
chhdvbL307	Citrus hongheensis cv. HH genome v1.0	Citrus hongheensis
dvbmpkR251	Murraya paniculata genome v1.0 (Kunming)	Murraya paniculata
dvbmpkR278	Murraya paniculata genome v1.0 (Kunming)	Murraya paniculata
clhdvbL215	Clausena lansium cv. HP genome v1.0	Clausena lansium
dvbmpjR264	Murraya paniculata cv. JLX genome v1.0	Murraya paniculata
dvbmpjR301	Murraya paniculata cv. JLX genome v1.0	Murraya paniculata
aeadvbL031	Aegle marmelos cv. AEG genome v1.0	Aegle marmelos
cigdvbL248	Citropsis gilletiana cv. CGI genome v1.0	Citropsis gilletiana
cmhdvbL165	Citrus maxima cv. Huazhouyou-tomentosa (HZY-T) genome v1.0	Citrus maxima
dvblssR296	Luvunga scandens cv. SYT genome v1.0	Luvunga scandens
clxdvbL268	Citrus limon cv. Xiangshui genome v1.0	Citrus limon
csjdvbL252	Citrus sinensis cv. Jinhong genome v1.0	Citrus sinensis
csjdvbL516	Citrus sinensis cv. Jinhong genome v1.0	Citrus sinensis
dvbneiR280	Citrus sinensis cv. Neixiu genome v1.0	Citrus sinensis
dvbneiR285	Citrus sinensis cv. Neixiu genome v1.0	Citrus sinensis
cradvbL240	Citrus australasica cv. Rainbow genome v1.0	Citrus australasica
cradvbL401	Citrus australasica cv. Rainbow genome v1.0	Citrus australasica
cchdvbL194	Citrus changshanensis cv. Huyou genome v1.0	Citrus changshanensis
ciudvbL172	Citrus inodora genome v1.0 (UQ)	Citrus inodora
ciudvbL390	Citrus inodora genome v1.0 (UQ)	Citrus inodora
cgadvbL070	Citrus garrawayi genome v1.0 (UQ)	Citrus garrawayi
cgadvbL189	Citrus garrawayi genome v1.0 (UQ)	Citrus garrawayi
cgadvbL409	Citrus garrawayi genome v1.0 (UQ)	Citrus garrawayi
cgudvbL066	Citrus glauca genome v1.0 (UQ)	Citrus glauca
cgudvbL168	Citrus glauca genome v1.0 (UQ)	Citrus glauca
cgudvbL362	Citrus glauca genome v1.0 (UQ)	Citrus glauca
cumdvbL000	Citrus unshiu cv. Miyagawa Wase genome v1.0	Citrus unshiu
crcdvbL318	Citrus reticulata 'Chachi' cv. Dazhongyoushen genome v1.0	Citrus reticulata
cstdvbL221	Citrus sinensis cv. Newhall T2T v2.0 genome	Citrus sinensis
crmdvbL242	Citrus reticulata cv. Murcott genome v1.0	Citrus reticulata
crmdvbL405	Citrus reticulata cv. Murcott genome v1.0	Citrus reticulata
cridvbL198	Citrus reticulata cv. IRM2 genome v1.0	Citrus reticulata
cridvbL420	Citrus reticulata cv. IRM2 genome v1.0	Citrus reticulata

Orthologs


Gene/Transcript	Assembly	Species
hap1-g18446.t1	Citrus inodora genome v1.0 (UQ)	Citrus inodora
Cau_v1.primary_g18396.t1	Citrus australasica CRC3672 genome v1	Citrus australasica
JLX200500.1	Murraya paniculata cv. JLX genome v1.0	Murraya paniculata
g18801.t1_h2	Citrus reticulata cv. Murcott genome v1.0	Citrus reticulata
Me_04221.1	Murraya paniculata genome v1.0 (Kunming)	Murraya paniculata
hap2-g3780.t1	Citrus glauca genome v1.0 (UQ)	Citrus glauca
eg_v1.0.alternate_g25258.t1	Citrus glauca CRC3463 genome v1	Citrus glauca
Pt6g009170.1	Poncirus trifoliata acc. ZK8 v1.0 (HZAU)	Poncirus trifoliata
Cmt232220.1	Citrus maxima cv. Huazhouyou-tomentosa (HZY-T) genome v1.0	Citrus maxima
mi_v1.0.primary_g18861.t1	Citrus inodora CRC3784 genome v1.0	Citrus inodora
Me_18042.1	Murraya paniculata genome v1.0 (Kunming)	Murraya paniculata
g18261.t1_h1	Citrus reticulata cv. Murcott genome v1.0	Citrus reticulata
g12977.t1	Citrus australis genome v1.0 (UQ)	Citrus australis
g19414.t1_h2	Citrus reticulata cv. IRM2 genome v1.0	Citrus reticulata
JLX147570.1	Murraya paniculata cv. JLX genome v1.0	Murraya paniculata
mi_v1.0.alternate_g18649.t1	Citrus inodora CRC3784 genome v1.0	Citrus inodora
CP6g001088.t1	Citrus reticulata 'Chachi' cv. Dazhongyoushen genome v1.0	Citrus reticulata
hap2-g17740.t1	Citrus garrawayi genome v1.0 (UQ)	Citrus garrawayi
hap2-g18022.t1	Citrus glauca genome v1.0 (UQ)	Citrus glauca
evm.model.ctg147.329	Citrus limon cv. Xiangshui genome v1.0	Citrus limon
Cau_v1.alternate_g2873.t1	Citrus australasica CRC3672 genome v1	Citrus australasica
Fh2g00890.1	Fortunella hindsii S3y-45 genome v2.0	Fortunella hindsii
g20916.t1	Citrus australasica cv. Rainbow genome v1.0	Citrus australasica
huyou00028613-RA	Citrus changshanensis cv. Huyou genome v1.0	Citrus changshanensis
Fh6g17810.1	Fortunella hindsii S3y-45 genome v2.0	Fortunella hindsii
hap1-g17326.t1	Citrus garrawayi genome v1.0 (UQ)	Citrus garrawayi
Cau_v1.primary_g2899.t1	Citrus australasica CRC3672 genome v1	Citrus australasica
sjg064900.1	Fortunella hindsii genome v1.0	Fortunella hindsii
Cau_v1.alternate_g17299.t1	Citrus australasica CRC3672 genome v1	Citrus australasica
g19789.t1	Citrus australasica cv. Rainbow genome v1.0	Citrus australasica
SYT155460.1	Luvunga scandens cv. SYT genome v1.0	Luvunga scandens
LW003510.1	Citrus linwuensis cv. LW genome v1.0	Citrus linwuensis
Cg6g013310.1	Citrus maxima (C. grandis) genome v1.0	Citrus maxima
gene-CUMW_003940-mRNA1	Citrus unshiu cv. Miyagawa Wase genome v1.0	Citrus unshiu
hap2-g20006.t1	Citrus inodora genome v1.0 (UQ)	Citrus inodora
hap2-g2913.t1	Citrus garrawayi genome v1.0 (UQ)	Citrus garrawayi
Pt2g000750.1	Poncirus trifoliata acc. ZK8 v1.0 (HZAU)	Poncirus trifoliata
sjg205520.1	Fortunella hindsii genome v1.0	Fortunella hindsii
hap1-g17721.t1	Citrus glauca genome v1.0 (UQ)	Citrus glauca
g20494.t1_h1	Citrus reticulata cv. IRM2 genome v1.0	Citrus reticulata

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Csi02G034880.1	Citrus sinensis cv. Neixiu genome v1.0	Citrus sinensis
gene-KPL70_018335-mRNA1	Citrus sinensis cv. Valencia DVS_A genome v1.0	Citrus sinensis
Cs_ont_6g010300.1	Citrus sinensis Di-Haploid Sweet Orange (DHSO) v3.0 (HZAU)	Citrus sinensis
Cs6g_pb013860.1	Citrus sinensis Valencia genome v2.0 (HZAU)	Citrus sinensis
CsN06G009350.1	Citrus sinensis cv. Newhall T2T v2.0 genome	Citrus sinensis
EVM_prediction_chr3.1_tiancheng.1432	Citrus sinensis cv. Newhall v1.0 genome	Citrus sinensis
drCitSine.Jinhong.1.0.HA6g10940.1	Citrus sinensis cv. Jinhong genome v1.0	Citrus sinensis
drCitSine.Jinhong.1.0.HB6g10850.1	Citrus sinensis cv. Jinhong genome v1.0	Citrus sinensis
EVM_prediction_ORIGINAL_97.15	Citrus sinensis cv. Gannanzao v1.0 genome	Citrus sinensis
Cs_ont_2g034820.2	Citrus sinensis Di-Haploid Sweet Orange (DHSO) v3.0 (HZAU)	Citrus sinensis
Csi06G010130.1	Citrus sinensis cv. Neixiu genome v1.0	Citrus sinensis
EVM_prediction_chr3.2_youzi.1482	Citrus sinensis cv. Newhall v1.0 genome	Citrus sinensis

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
gene-KPL71_018527	gene-KPL71_018527_Citrus_sinensis_DVS_B_v1	Citrus sinensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-exon1	rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-exon1_Citrus_sinensis_DVS_B_v1	Citrus sinensis	exon
rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-exon2	rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-exon2_Citrus_sinensis_DVS_B_v1	Citrus sinensis	exon
rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-exon3	rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-exon3_Citrus_sinensis_DVS_B_v1	Citrus sinensis	exon
rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-exon4	rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-exon4_Citrus_sinensis_DVS_B_v1	Citrus sinensis	exon
rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-exon5	rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-exon5_Citrus_sinensis_DVS_B_v1	Citrus sinensis	exon
rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-exon6	rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-exon6_Citrus_sinensis_DVS_B_v1	Citrus sinensis	exon
rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-exon7	rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-exon7_Citrus_sinensis_DVS_B_v1	Citrus sinensis	exon
rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-exon8	rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-exon8_Citrus_sinensis_DVS_B_v1	Citrus sinensis	exon
rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-exon9	rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-exon9_Citrus_sinensis_DVS_B_v1	Citrus sinensis	exon
rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-exon10	rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-exon10_Citrus_sinensis_DVS_B_v1	Citrus sinensis	exon
rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-exon11	rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-exon11_Citrus_sinensis_DVS_B_v1	Citrus sinensis	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-CDS1	rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-CDS1_Citrus_sinensis_DVS_B_v1	Citrus sinensis	CDS
rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-CDS2	rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-CDS2_Citrus_sinensis_DVS_B_v1	Citrus sinensis	CDS
rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-CDS3	rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-CDS3_Citrus_sinensis_DVS_B_v1	Citrus sinensis	CDS
rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-CDS4	rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-CDS4_Citrus_sinensis_DVS_B_v1	Citrus sinensis	CDS
rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-CDS5	rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-CDS5_Citrus_sinensis_DVS_B_v1	Citrus sinensis	CDS
rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-CDS6	rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-CDS6_Citrus_sinensis_DVS_B_v1	Citrus sinensis	CDS
rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-CDS7	rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-CDS7_Citrus_sinensis_DVS_B_v1	Citrus sinensis	CDS
rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-CDS8	rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-CDS8_Citrus_sinensis_DVS_B_v1	Citrus sinensis	CDS
rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-CDS9	rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-CDS9_Citrus_sinensis_DVS_B_v1	Citrus sinensis	CDS
rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-CDS10	rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-CDS10_Citrus_sinensis_DVS_B_v1	Citrus sinensis	CDS
rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-CDS11	rna-gnl\|WGS:JAHMIT\|DVS6B01424.t01-CDS11_Citrus_sinensis_DVS_B_v1	Citrus sinensis	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
gene-KPL71_018527-mRNA1_Citrus_sinensis_DVS_B_v1	gene-KPL71_018527-mRNA1_Citrus_sinensis_DVS_B_v1	Citrus sinensis	polypeptide
gene-KPL71_018527-mRNA1_Citrus_sinensis_DVS_B_v1	gene-KPL71_018527-mRNA1_Citrus_sinensis_DVS_B_v1-protein	Citrus sinensis	polypeptide

Homology

[Close]

BLAST of gene-KPL71_018527-mRNA1 vs. DB:SwissProt
Match: PP2A4_ARATH (Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Arabidopsis thaliana OX=3702 GN=PP2A4 PE=1 SV=1)

HSP 1 Score: 623.239 bits (1606), Expect = 0.000e+0
Identity = 303/313 (96.81%), Postives = 308/313 (98.40%), Query Frame = 1

Query:  106 MGANXXXXXXXXXXXEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 1044
            MGANSL TD T DLDEQISQLMQCKPLSE QV+ALCEKAKEILM+ESNVQPVKSPVTICGDIHGQFHDLAELF+IGGKCPDTNYLFMGDYVDRGYYSVETVTLLV LKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN+WKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCR+HTFIQFEPAPRRGEPDVTRRTPDYFL
Sbjct:    1 MGANSLPTDATLDLDEQISQLMQCKPLSEQQVRALCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVGLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRNHTFIQFEPAPRRGEPDVTRRTPDYFL 313

[Close]

BLAST of gene-KPL71_018527-mRNA1 vs. DB:SwissProt
Match: PP2A3_ARATH (Serine/threonine-protein phosphatase PP2A-3 catalytic subunit OS=Arabidopsis thaliana OX=3702 GN=PP2A3 PE=1 SV=2)

HSP 1 Score: 620.157 bits (1598), Expect = 0.000e+0
Identity = 300/313 (95.85%), Postives = 308/313 (98.40%), Query Frame = 1

Query:  106 MGANXXXXXXXXXXXEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 1044
            MGANS+ TD T DLDEQISQLMQCKPLSE QV+ALCEKAKEILM+ESNVQPVKSPVTICGDIHGQFHDLAELF+IGG CPDTNYLFMGDYVDRGYYSVETVTLLVALK+RYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN+WKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDG+NWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCR+HTFIQFEPAPRRGEPDVTRRTPDYFL
Sbjct:    1 MGANSIPTDATIDLDEQISQLMQCKPLSEQQVRALCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGMCPDTNYLFMGDYVDRGYYSVETVTLLVALKMRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGYNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRNHTFIQFEPAPRRGEPDVTRRTPDYFL 313

[Close]

BLAST of gene-KPL71_018527-mRNA1 vs. DB:SwissProt
Match: PP2A_MEDSA (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Medicago sativa OX=3879 GN=PP2A PE=2 SV=1)

HSP 1 Score: 618.616 bits (1594), Expect = 0.000e+0
Identity = 297/313 (94.89%), Postives = 306/313 (97.76%), Query Frame = 1

Query:  106 MGANXXXXXXXXXXXEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 1044
            MGANS+  D T DL+EQISQLMQCKPLSE QVK LCEKAKEILM+ESNVQPVKSPVTICGDIHGQFHDLAELF+IGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYG+AN+WKIFTDLFD+FPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTN+LKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDC+ HTFIQFEPAPRRGEPDVTRRTPDYFL
Sbjct:    1 MGANSMIADVTHDLNEQISQLMQCKPLSEQQVKELCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGSANVWKIFTDLFDFFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNSLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRGEPDVTRRTPDYFL 313

[Close]

BLAST of gene-KPL71_018527-mRNA1 vs. DB:SwissProt
Match: PP2A2_ORYSJ (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Oryza sativa subsp. japonica OX=39947 GN=PP2A2 PE=2 SV=1)

HSP 1 Score: 610.527 bits (1573), Expect = 0.000e+0
Identity = 286/298 (95.97%), Postives = 294/298 (98.66%), Query Frame = 1

Query:  151 EQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 1044
            +QI +LMQCKPL EP+V+ALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELF+IGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNL+LIARAHQLVM+GFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCR HTFIQFEPAPRRGEPDVTRRTPDYFL
Sbjct:   10 DQIERLMQCKPLPEPEVRALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLRLIARAHQLVMEGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCREHTFIQFEPAPRRGEPDVTRRTPDYFL 307

[Close]

BLAST of gene-KPL71_018527-mRNA1 vs. DB:SwissProt
Match: PP2A2_ORYSI (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Oryza sativa subsp. indica OX=39946 GN=PP2A2 PE=2 SV=2)

HSP 1 Score: 610.527 bits (1573), Expect = 0.000e+0
Identity = 286/298 (95.97%), Postives = 294/298 (98.66%), Query Frame = 1

Query:  151 EQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 1044
            +QI +LMQCKPL EP+V+ALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELF+IGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNL+LIARAHQLVM+GFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCR HTFIQFEPAPRRGEPDVTRRTPDYFL
Sbjct:   10 DQIERLMQCKPLPEPEVRALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLRLIARAHQLVMEGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCREHTFIQFEPAPRRGEPDVTRRTPDYFL 307

[Close]

BLAST of gene-KPL71_018527-mRNA1 vs. DB:SwissProt
Match: PP2A_TOBAC (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 604.364 bits (1557), Expect = 0.000e+0
Identity = 284/298 (95.30%), Postives = 291/298 (97.65%), Query Frame = 1

Query:  151 EQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 1044
            EQI+QLMQCKPLSE +V+ LCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELF+IGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEG MCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVM+GFNWAH+QKVVTIFSAPNYCYRCGNMASILEVDD R  TFIQFEPAPRRGEPDVTRRTPDYFL
Sbjct:   15 EQIAQLMQCKPLSEQEVRGLCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGAMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGFNWAHDQKVVTIFSAPNYCYRCGNMASILEVDDSRERTFIQFEPAPRRGEPDVTRRTPDYFL 312

[Close]

BLAST of gene-KPL71_018527-mRNA1 vs. DB:SwissProt
Match: PP2A4_ORYSJ (Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. japonica OX=39947 GN=PP2A4 PE=2 SV=2)

HSP 1 Score: 600.897 bits (1548), Expect = 0.000e+0
Identity = 278/297 (93.60%), Postives = 292/297 (98.32%), Query Frame = 1

Query:  154 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 1044
            QI QLM+C+PLSEP+VK LCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDL ELF+IGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYG+AN+WKIFTDLFDYFPLTALVESEIFCLHGGLSPSI+ LD++R+ DRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKL+ARAHQLVM+G+NWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCR+HTFIQFEPAPRRGEPDVTRRTPDYFL
Sbjct:   18 QIEQLMECRPLSEPEVKTLCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGSANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIDNLDSVRSLDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLVARAHQLVMEGYNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRNHTFIQFEPAPRRGEPDVTRRTPDYFL 314

[Close]

BLAST of gene-KPL71_018527-mRNA1 vs. DB:SwissProt
Match: PP2A5_TOBAC (Serine/threonine-protein phosphatase PP2A-5 catalytic subunit OS=Nicotiana tabacum OX=4097 GN=NPP5 PE=2 SV=1)

HSP 1 Score: 597.43 bits (1539), Expect = 0.000e+0
Identity = 278/298 (93.29%), Postives = 291/298 (97.65%), Query Frame = 1

Query:  151 EQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 1044
            EQISQLMQCKPLSEP V+ALCEKAKEIL EESNVQPVKSPVTICGDIHGQFHDLAELF+IGG+CPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQR+TILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDYFPLTALVESEIFCLHGGLSPSIETLDN+R+FDRVQEVPHEG MCDLLWSDPDD CGWG+SPRGAGYTFGQDISEQF+ TNNLKLIARAHQLVM+G+NW+HEQKVVTIFSAPNYCYRCGNMASILEVDDCR HTFIQF+PAPRRGEPDVTRRTPDYFL
Sbjct:   17 EQISQLMQCKPLSEPDVRALCEKAKEILAEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGQCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRLTILRGNHESRQITQVYGFYDECLRKYGNANVWKTFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNVRSFDRVQEVPHEGAMCDLLWSDPDDCCGWGMSPRGAGYTFGQDISEQFHQTNNLKLIARAHQLVMEGYNWSHEQKVVTIFSAPNYCYRCGNMASILEVDDCRGHTFIQFDPAPRRGEPDVTRRTPDYFL 314

[Close]

BLAST of gene-KPL71_018527-mRNA1 vs. DB:SwissProt
Match: PP2A4_ORYSI (Putative serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. indica OX=39946 GN=PP2A4 PE=3 SV=1)

HSP 1 Score: 597.045 bits (1538), Expect = 0.000e+0
Identity = 276/297 (92.93%), Postives = 291/297 (97.98%), Query Frame = 1

Query:  154 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 1044
            QI QLM+C+PLSE +VK LCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDL ELF+IGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYG+AN+WKIFTDLFDYFPLTALVESEIFCLHGGLSPSI+ LD++R+ DRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNH+NNLKL+ARAHQLVM+G+NWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCR+HTFIQFEPAPRRGEPDVTRRTPDYFL
Sbjct:   19 QIEQLMECRPLSETEVKTLCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGSANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIDNLDSVRSLDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHSNNLKLVARAHQLVMEGYNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRNHTFIQFEPAPRRGEPDVTRRTPDYFL 315

[Close]

BLAST of gene-KPL71_018527-mRNA1 vs. DB:SwissProt
Match: PP2A_BRANA (Serine/threonine-protein phosphatase PP2A catalytic subunit (Fragment) OS=Brassica napus OX=3708 PE=2 SV=2)

HSP 1 Score: 594.349 bits (1531), Expect = 0.000e+0
Identity = 279/298 (93.62%), Postives = 288/298 (96.64%), Query Frame = 1

Query:  151 EQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRGEPDVTRRTPDYFL 1044
            EQISQLMQCKPLSE QV+ALCEKAKEILM+ESNVQPVKSPVTICGDIHGQFHDLAELF+IGG CPDTNYLFMGDYVDRGYYSVETVTLLV LKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNAN+WK FTDLFDY PLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPH GPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIS QFNH+N+LKLI+RAHQLVMDG+NWAHE K  TIFSAPNYCYRCGNMASILEVDDCR+HTFIQFEPAPRRGEPDVTRRTPDYFL
Sbjct:   12 EQISQLMQCKPLSEQQVRALCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGMCPDTNYLFMGDYVDRGYYSVETVTLLVGLKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHGGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISNQFNHSNSLKLISRAHQLVMDGYNWAHEAKGGTIFSAPNYCYRCGNMASILEVDDCRNHTFIQFEPAPRRGEPDVTRRTPDYFL 309

The following BLAST results are available for this feature:

BLAST of gene-KPL71_018527-mRNA1 vs. DB:SwissProt

BLAST of gene-KPL71_018527-mRNA1 vs. DB:SwissProt
Analysis Date: 2023-04-17 (BLAST: C. sinensis DVS_B v1.0)
Total hits: 10

Position :

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Match Name	E-value	Identity	Description
PP2A4_ARATH	0.000e+0	96.81	Serine/threonine-protein phosphatase PP2A-4 cataly...	[more]
PP2A3_ARATH	0.000e+0	95.85	Serine/threonine-protein phosphatase PP2A-3 cataly...	[more]
PP2A_MEDSA	0.000e+0	94.89	Serine/threonine-protein phosphatase PP2A catalyti...	[more]
PP2A2_ORYSJ	0.000e+0	95.97	Serine/threonine-protein phosphatase PP2A-2 cataly...	[more]
PP2A2_ORYSI	0.000e+0	95.97	Serine/threonine-protein phosphatase PP2A-2 cataly...	[more]
PP2A_TOBAC	0.000e+0	95.30	Serine/threonine-protein phosphatase PP2A catalyti...	[more]
PP2A4_ORYSJ	0.000e+0	93.60	Serine/threonine-protein phosphatase PP2A-4 cataly...	[more]
PP2A5_TOBAC	0.000e+0	93.29	Serine/threonine-protein phosphatase PP2A-5 cataly...	[more]
PP2A4_ORYSI	0.000e+0	92.93	Putative serine/threonine-protein phosphatase PP2A...	[more]
PP2A_BRANA	0.000e+0	93.62	Serine/threonine-protein phosphatase PP2A catalyti...	[more]

InterPro

Analysis Name: InterPro: C. sinensis DVS_B v1.0
Date Performed: 2023-04-17

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006186	Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase	PRINTS	PR00114	STPHPHTASE	coord: 117..141 score: 68.45 coord: 237..257 score: 46.28 coord: 181..208 score: 57.79 coord: 84..111 score: 67.88 coord: 55..82 score: 60.58 coord: 152..178 score: 53.94 coord: 259..275 score: 66.51
IPR004843	Calcineurin-like phosphoesterase domain, ApaH type	PFAM	PF00149	Metallophos	coord: 55..246 e-value: 1.6E-36 score: 126.8
IPR029052	Metallo-dependent phosphatase-like	GENE3D	3.60.21.10		coord: 6..313 e-value: 1.6E-139 score: 465.7
IPR029052	Metallo-dependent phosphatase-like	SUPERFAMILY	56300	Metallo-dependent phosphatases	coord: 10..298
IPR047129	Serine/Threonine protein phosphatase PP2A-like	PANTHER	PTHR45619	SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED	coord: 12..313
None	No IPR available	CDD	cd07415	MPP_PP2A_PP4_PP6	coord: 13..297 e-value: 0.0 score: 614.209

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at CM039175.1_Chr6_DVS_B:19036085..19040869+
coding sequence from alignment at CM039175.1_Chr6_DVS_B:19036085..19040869+

mRNA sequence

>gene-KPL71_018527-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018527-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018527-mRNA1; organism=Citrus sinensis; type=mRNA; length=1298bp
CTGAAGAATCACACAAACGAAACTCTCTGATCTCACTCTAGGGTTAGGGA
TATCCCTAATCCGGACACCGTTATCCCGATTCGGTTTAGGATTCGAGAAT
CAAAGATGGGCGCAAATTCGTTATCCACTGACACGACCACCGACCTCGAC
GAGCAGATCTCGCAGCTCATGCAGTGCAAGCCTCTCTCCGAACCACAGGT
TAAAGCATTATGCGAGAAGGCTAAGGAGATATTGATGGAAGAAAGCAATG
TACAGCCTGTGAAAAGTCCAGTGACAATTTGTGGCGATATTCATGGGCAG
TTTCATGATCTTGCAGAACTTTTTCAAATTGGCGGGAAGTGTCCAGATAC
CAATTACTTGTTTATGGGAGATTATGTGGACCGTGGGTATTATTCTGTTG
AAACAGTTACGCTCTTAGTGGCCTTGAAGGTGCGGTATCCTCAGCGGATC
ACTATTCTTAGAGGAAACCATGAGAGTCGTCAGATTACTCAAGTTTATGG
ATTCTATGATGAATGTCTACGGAAGTATGGCAATGCTAACATTTGGAAGA
TTTTTACTGACCTTTTTGACTACTTTCCGTTGACTGCCTTGGTAGAGTCA
GAAATATTCTGTCTGCATGGTGGGCTGTCCCCTTCAATTGAAACACTTGA
TAATATCAGGAACTTTGATCGTGTTCAAGAGGTTCCTCATGAAGGGCCCA
TGTGTGATTTGTTATGGTCTGACCCAGATGATAGATGTGGTTGGGGTATC
TCACCTCGTGGTGCTGGATATACTTTTGGCCAGGACATATCTGAACAATT
CAATCATacaaacaacttaaaattGATTGCTAGAGCTCATCAACTGGTCA
TGGATGGATTTAATTGGGCGCATGAACAAAAGGTTGTTACTATATTTAGC
GCACCTAACTATTGTTATCGCTGTGGCAACATGGCTTCTATCTTGGAAGT
TGATGACTGTAGGAGCCACACGTTCATTCAGTTTGAGCCAGCTCCTAGGA
GAGGAGAACCAGATGTTACACGCAGAACACCTGATTACTTCCTGTGAAGC
TGCCTTTGTGTCATACTGATTCATTTCACTTGCTTCTCCTCCCCTCATTG
TGTAACAGTCGGGCAACTGTGGATCCTCCATTAATCCTCTgcgtgctttt
tttttttttttgggtggtaATGTGTCCAAAAAAGAACGTGAGCTACGGGG
GTTAGATGCCCTTCTATCCGTTTTACACTTGAAAGCGTTTTCAGAACTCT
GCTGGGGATATTGCCTAGGTGATGACCAATTGACGATGTCAGAAATGT

protein sequence of gene-KPL71_018527-mRNA1_Citrus_sinensis_DVS_B_v1

>gene-KPL71_018527-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018527-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018527-mRNA1_Citrus_sinensis_DVS_B_v1; organism=Citrus sinensis; type=polypeptide; length=313bp
MGANSLSTDTTTDLDEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQ
PVKSPVTICGDIHGQFHDLAELFQIGGKCPDTNYLFMGDYVDRGYYSVET
VTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANIWKIF
TDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMC
DLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMD
GFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCRSHTFIQFEPAPRRG
EPDVTRRTPDYFL

mRNA from alignment at CM039175.1_Chr6_DVS_B:19036085..19040869+

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

> ID=; Name=; organism= ; type=; length=4785bp; location=Sequence derived from: CM039175.1_Chr6_DVS_B:19036085..19040869+ (Citrus sinensis
CTGAAGAATCACACAAACGAAACTCTCTGATCTCACTCTAGGGTTAGGGA
TATCCCTAATCCGGACACCGTTATCCCGATTCGGTTTAGGATTCGAGAAT
CAAAGATGGGCGCAAATTCGTTATCCACTGACACGACCACCGACCTCGAC
GAGCAGATCTCGCAGCTCATGCAGTGCAAGCCTCTCTCCGAACCACAGGT
TCCTTCCAATTAACGCTCGCAATTTCAATTAATCTGATCAGCCAATATTT
GATTGATTATCAGaaacttgaaaaatctttGTTGAGTATCAGGagttaga
aaatgaaattatccATTTCTTGTACAAAAATGGAagtattaagtataaaa
aaatacgaATAAAGGTCCTTGCAATTAGGTATTATTGGATTTAGGGTTTA
TAGCGGACGGATACTTCAGATCTCAATCATTGATCTGTTTTAGGTATTTG
TATTGGCAAAAGAGAAGTTTTATGAAGTTGTATTGGCAAAAGAACAAGAT
TTGTATGAGTTTCTATTTTTTGTCGTGATATAACAATGATGGCTTGAGGA
TAATTCGCAAAGAAGGAAACAGTGAATCACATCTTGTAATTGCAGTGTTT
TTGCTTAATTCTGGAAGCTTGAAAACTAAAGTGTTTGTGAAATATCAACA
TTTAAATGGGAACTAATATTTACCAACAATGTATCCACTATCCTTGCAAT
GCTATAAAGGGACCTATCTTGTGTTATGTTGTCAAAGTGTGTTGTCAGTC
TCGCAATTCATAATGCAACTGAGGTGGATTAGTAAtcatatttgatttga
tttactGTTCTGTAGGTTAAAGCATTATGCGAGAAGGCTAAGGAGATATT
GATGGAAGAAAGCAATGTACAGGTTGAACccttttattacttttaaacat
aacatcttttttttttttttttcacatctTTGGTTTCTAAGAAGCTTACC
TGTGGTGGTATTATTCATAATCTTGGGAAAGATAGGCATCTTCTTTGGAA
CTAGATACTCTACTGTTGGTTGCCTTCAGTtggaaatttattatcttGGT
TCTGAAATCCCGGTCTCAGTGTAATTGTTGtcctccttttcttttctcgt
ATTTCACCACTCTGTAGATGTTATACTCTTATGTTGAAATGCTGAAGCAT
TGATATTTTCTCCCTTCTTTTGTATCTCAGCCTGTGAAAAGTCCAGTGAC
AATTTGTGGCGATATTCATGGGCAGTTTCATGATCTTGCAGAACTTTTTC
AAATTGGCGGGAAGGTATCAGTTTTGACTATGActatttttgtatttagt
tTTCTGTTTCAGGGTTTCTGTGTGTATTTTatcatcttttattttgttgg
aaAGTGTCCTCAAGAGGTGAGTCAAAATGGTaccattttgatttgattta
tgttAATTGACTTTCTGAAAATCCATCATGAATAATGCTTTTAATGGAAC
TCTCACTACTTAATAGCTGCTATACATCCTGATTTAAAGACTGCCTTTTG
GTTTTCTCCTTCATGCTTTACTTGTCTGCTTTAGGATAGGATactgtgtt
gattttttcttgaacttccttcatattgattaaaatctgatctttatttt
aaattggcAGTGTCCAGATACCAATTACTTGTTTATGGGAGATTATGTGG
ACCGTGGGTATTATTCTGTTGAAACAGTTACGGTACGTTACATTTAATGT
CAGAGTATCTTTTCCatgttattataaatattagtacTATATAACATCTA
CAAGTGTCAAAATTAGTACCACCAGCTGATAAAATTGGTTTAATTAGCCT
TTTATCCGTTTGGAGTGGTAGTCTTCTACAATCAAAAAACGCTGTGATTG
ATTTATCAAACCTTAGTTCTTATCCTTCCTCTCCTCACTTCCTCTTAGTC
TTCGTGTTGTCTGCCTTGGGATGATGTATTACTTGGCATAAAATGTTGCA
CTTAGGAATGCTGACACCTTTATATTTTCAGTATAGCAGCTTCATTGGAT
GTCAATATGGAGTGGTGTTTATGAATCTTATTCGTGGCTTTTTATGGATA
CTGAAATTCCTCAGtactattttgaaaaatatgttttccACAGCTCTTAT
CTGttgattttggttttggagagagaattttggatttatttgattgcttt
aCTGGTAATTTCCTTAGTGTTGCACCTGAAGTTACTTATTGATTCTGAGT
TGGGTGTTCATACAGCTCTTAGTGGCCTTGAAGGTGCGGTATCCTCAGCG
GATCACTATTCTTAGAGGAAACCATGAGAGTCGTCAGGTTCACTCTTGCA
ACCTTTTCTTTctgctttcattttctctgtTAAAAGtcctcttttttatt
tatttatttatttatttggggTGAATCTATAATCTCAGTAAATCCTGTCT
ACTGTGCTATTCATAGTGTAGAGATATGGTCTTTGAAATTGAGCGGGAGT
CTTATTTTGTTCATCGGAATTTATTctactttattaatttttattttaca
taattgtgGTTTAATTGGTACACTGTCGAATTATTGGATCTGCAGACTGT
TCAATGAATAAACTAAATATTGCTTTCATTTAATCTGCTACAGATTACTC
AAGTTTATGGATTCTATGATGAATGTCTACGGAAGTGAGTTCTCTACGCT
CAAACTTTATTCAAGAGATCATAATGAAAATCATGTCTTGATTTTTGCTG
CAAAGTTATTTTCTGGATAACTTCCAGTTCATCAGTTTGTCAAAACGTAT
TCTCTATTCAAATTAAGATAACATTATACTTGCAAGTTGAAAACTCCTGT
AAGATGTCACTCAAGCTTGCTATCATTGATGCAGTACTGCTTTTATAACA
GTATACTTACATCAACTTTTCTGCAGAGTGGCAGAAagggtaatttattt
ttcaacttttccTTTATCACCCTTGGGAATTCCATTTGTAATACATTGct
gcaaagaattttattactaaagaCTTCATACTTAGTTTGTTATTTCTTTG
ATGCTGAGATATTGGCTcctttgtgttggattgaATTCCTATTGGAATGC
ATCATCTCCATGATTATATGGACTTAAATGTGCAACTAACATAGTTTATG
CTGTTCAGCTGCAAAGAATTATCTCATTACGGTTTATTTACAGGTATGGC
AATGCTAACATTTGGAAGATTTTTACTGACCTTTTTGACTACTTTCCGTT
GACTGCCTTGGTAAGTGGAAGTAAAATTTGATGCTAGCCATTTTGGTTGA
AAGTTATAAATGAAGTAAATACAAGGAAGCAACAGTTAGTGCACCTACCT
TAGCCCTTATgcattttaattgtttgataTAGATGTTTGCTTAGCTTTAA
TTCGTATTGGATGGGGCGGATGTGGTTCTGAGTTTACCTTTGTCATGACT
CAGCTCACTTCTGCGCAAGTGTTTTTATGTATAGTGGTTGTAACTTCTGA
ATTTCGTTATGGATTCCACTAGGACTTTTATGTTATCACATTATTTTCCG
ATCATAAGAATTGAGAAATACCaggatttaattttaaggaaCACACTGCA
AATTCTCCATTTCCAGTAGGGTAGGAATCTTAAATATATTGCTATTATGA
TGCTGGGTGGCTGCTTAGcttccaaaattaatttttttaattttatattg
gtgaataaaaaatgtgaTTCTAATCAGTTGTAAGGAACCCCTTTTTTTAT
GCTGGTAGTCAAAAGGTTATTTAACTGTTGCTAAAGTTCTATGTTTTCAT
GTGTAGGTAGAGTCAGAAATATTCTGTCTGCATGGTGGGCTGTCCCCTTC
AATTGAAACACTTGATAATATCAGGAACTTTGATCGTGTTCAAGAGGTTC
CTCATGAAGGGCCCATGTGTGATTTGTTATGGTCTGACCCAGATGATAGA
TGTGGTTGGGGTATCTCACCTCGTGGTGCTGGATATACTTTTGGCCAGGT
ACTGTACTCTGAATTTCTACCTTTTGTTATTCAAAGTTAGCTCTCATTGA
TGTTTTTAATGGTAATTGCACTTATTCTTCAATTGTCTATCTTAACTGTT
GGATTCTGTTTGCAGGACATATCTGAACAATTCAATCATacaaacaactt
aaaattGATTGCTAGAGCTCATCAACTGGTCATGGATGGATTTAATTGGG
CGCATGTAATATTTGACTTTCAGATACTTACCAGATAATAATCTTTTTCC
CTTtgataaaagaatattatatgtattatcACAATGATTCCTTGGTGCAG
GAACAAAAGGTTGTTACTATATTTAGCGCACCTAACTATTGTTATCGCTG
TGGCAACATGGCTTCTATCTTGGAAGTTGATGACTGTAGGAGCCACACGT
TCATTCAGGTATTCCTCTCTTCTGTTTCCCCTAAAACTTGAAAGTGCAGC
CCTTATTGCTATATTCTGATGATGCATTTGTACTTGCGTAAAACTTAATA
AACTTTGTCTTGTTACAGTTTGAGCCAGCTCCTAGGAGAGGAGAACCAGA
TGTTACACGCAGAACACCTGATTACTTCCTGTGAAGCTGCCTTTGTGTCA
TACTGATTCATTTCACTTGCTTCTCCTCCCCTCATTGTGTAACAGTCGGG
CAACTGTGGATCCTCCATTAATCCTCTgcgtgctttttttttttttttgg
gtggtaATGTGTCCAAAAAAGAACGTGAGCTACGGGGGTTAGATGCCCTT
CTATCCGTTTTACACTTGAAAGCGTTTTCAGAACTCTGCTGGGGATATTG
CCTAGGTGATGACCAATTGACGATGTCAGAAATGT

Coding sequence (CDS) from alignment at CM039175.1_Chr6_DVS_B:19036085..19040869+

>gene-KPL71_018527-mRNA1_Citrus_sinensis_DVS_B_v1 ID=gene-KPL71_018527-mRNA1_Citrus_sinensis_DVS_B_v1; Name=gene-KPL71_018527-mRNA1; organism=Citrus sinensis; type=CDS; length=942bp; location=Sequence derived from: CM039175.1_Chr6_DVS_B:19036085..19040869+ (Citrus sinensis
ATGGGCGCAAATTCGTTATCCACTGACACGACCACCGACCTCGACGAGCA
GATCTCGCAGCTCATGCAGTGCAAGCCTCTCTCCGAACCACAGGTTAAAG
CATTATGCGAGAAGGCTAAGGAGATATTGATGGAAGAAAGCAATGTACAG
CCTGTGAAAAGTCCAGTGACAATTTGTGGCGATATTCATGGGCAGTTTCA
TGATCTTGCAGAACTTTTTCAAATTGGCGGGAAGTGTCCAGATACCAATT
ACTTGTTTATGGGAGATTATGTGGACCGTGGGTATTATTCTGTTGAAACA
GTTACGCTCTTAGTGGCCTTGAAGGTGCGGTATCCTCAGCGGATCACTAT
TCTTAGAGGAAACCATGAGAGTCGTCAGATTACTCAAGTTTATGGATTCT
ATGATGAATGTCTACGGAAGTATGGCAATGCTAACATTTGGAAGATTTTT
ACTGACCTTTTTGACTACTTTCCGTTGACTGCCTTGGTAGAGTCAGAAAT
ATTCTGTCTGCATGGTGGGCTGTCCCCTTCAATTGAAACACTTGATAATA
TCAGGAACTTTGATCGTGTTCAAGAGGTTCCTCATGAAGGGCCCATGTGT
GATTTGTTATGGTCTGACCCAGATGATAGATGTGGTTGGGGTATCTCACC
TCGTGGTGCTGGATATACTTTTGGCCAGGACATATCTGAACAATTCAATC
ATacaaacaacttaaaattGATTGCTAGAGCTCATCAACTGGTCATGGAT
GGATTTAATTGGGCGCATGAACAAAAGGTTGTTACTATATTTAGCGCACC
TAACTATTGTTATCGCTGTGGCAACATGGCTTCTATCTTGGAAGTTGATG
ACTGTAGGAGCCACACGTTCATTCAGTTTGAGCCAGCTCCTAGGAGAGGA
GAACCAGATGTTACACGCAGAACACCTGATTACTTCCTGTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR006186	Ser/Thr-sp_prot-phosphatase
IPR004843	Calcineurin-like_PHP_ApaH
IPR029052	Metallo-depent_PP-like
IPR047129	PPA2-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0016787	hydrolase activity
GO:0004722	protein serine/threonine phosphatase activity