EVM_prediction_HIC_ASM_8.780
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Transcript Overview
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of EVM_prediction_HIC_ASM_8.780 vs. ExPASy TrEMBL
Match: A0A067FTA8|A0A067FTA8_CITSI (poly(A)-specific ribonuclease OS=Citrus sinensis OX=2711 GN=CISIN_1g023614mg PE=3 SV=1) HSP 1 Score: 576.63 bits (1485), Expect = 0.000e+0 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0 Query: 1 MSDVPPPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGLELLEC 280
MSDVPPPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGLELLEC
Sbjct: 1 MSDVPPPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGLELLEC 280
BLAST of EVM_prediction_HIC_ASM_8.780 vs. ExPASy TrEMBL
Match: A0A2H5MYC3|A0A2H5MYC3_CITUN (poly(A)-specific ribonuclease OS=Citrus unshiu OX=55188 GN=CUMW_005060 PE=3 SV=1) HSP 1 Score: 570.852 bits (1470), Expect = 0.000e+0 Identity = 278/280 (99.29%), Postives = 279/280 (99.64%), Query Frame = 0 Query: 1 MSDVPPPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGLELLEC 280
MSDVPPPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCT LYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGN+YELQKYANVLHGLELLEC
Sbjct: 1 MSDVPPPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTGLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNDYELQKYANVLHGLELLEC 280
BLAST of EVM_prediction_HIC_ASM_8.780 vs. ExPASy TrEMBL
Match: A0A067FT67|A0A067FT67_CITSI (poly(A)-specific ribonuclease OS=Citrus sinensis OX=2711 GN=CISIN_1g023614mg PE=3 SV=1) HSP 1 Score: 515.768 bits (1327), Expect = 0.000e+0 Identity = 256/280 (91.43%), Postives = 256/280 (91.43%), Query Frame = 0 Query: 1 MSDVPPPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGLELLEC 280
MSDVPPPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQ GLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGLELLEC
Sbjct: 1 MSDVPPPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQ------------------------GLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGLELLEC 256
BLAST of EVM_prediction_HIC_ASM_8.780 vs. ExPASy TrEMBL
Match: V4SRK5|V4SRK5_CITCL (poly(A)-specific ribonuclease OS=Citrus clementina OX=85681 GN=CICLE_v10012581mg PE=3 SV=1) HSP 1 Score: 451.825 bits (1161), Expect = 4.286e-159 Identity = 220/226 (97.35%), Postives = 222/226 (98.23%), Query Frame = 0 Query: 1 MSDVPPPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCK 226
MSDVPPPQPPK I+IREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCT LYGGLDRV +
Sbjct: 1 MSDVPPPQPPKSWIVIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTGLYGGLDRVAR 226
BLAST of EVM_prediction_HIC_ASM_8.780 vs. ExPASy TrEMBL
Match: A0A067FWP2|A0A067FWP2_CITSI (poly(A)-specific ribonuclease OS=Citrus sinensis OX=2711 GN=CISIN_1g023614mg PE=3 SV=1) HSP 1 Score: 421.009 bits (1081), Expect = 2.602e-147 Identity = 218/280 (77.86%), Postives = 218/280 (77.86%), Query Frame = 0 Query: 1 MSDVPPPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGLELLEC 280
MSDVPPPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQ GLVLNKDVTWVTFHSAYDFG FCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGLELLEC
Sbjct: 1 MSDVPPPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQ------------------------GLVLNKDVTWVTFHSAYDFG--------------------------------------FCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGLELLEC 218
BLAST of EVM_prediction_HIC_ASM_8.780 vs. ExPASy TrEMBL
Match: A0A5C7HMD9|A0A5C7HMD9_9ROSI (poly(A)-specific ribonuclease OS=Acer yangbiense OX=1000413 GN=EZV62_016000 PE=3 SV=1) HSP 1 Score: 416.001 bits (1068), Expect = 4.239e-144 Identity = 202/267 (75.66%), Postives = 229/267 (85.77%), Query Frame = 0 Query: 12 PRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGLELL 278
P I+IR V+ NL +EF IR ++DR+PII+MDTEFPGV+VRPD RHR+P ANY LK NVD L LIQIGLTLSDEEGNLPDLGSGST YIWEFNFKDFDIA HA DSVELLKRQGIDFEKNRE GIDS+ FAEL++SSGLVLN+DVTWVTFHSAYDFGYLVKCL VLP+ L++F+ RV +FFG++VYDVKHL+RFC LYGGLDRVCKAL VERV+GKSHQAGSDSLLTLHAFLKIKD +FG + E +KY NVLHGLE++
Sbjct: 25 PEIVIRSVWAHNLTAEFGIIRDVVDRFPIIAMDTEFPGVIVRPDPVHRHRNPDANYTSLKTNVDELKLIQIGLTLSDEEGNLPDLGSGSTRYIWEFNFKDFDIAHDKHAHDSVELLKRQGIDFEKNRELGIDSLLFAELMISSGLVLNEDVTWVTFHSAYDFGYLVKCLMPDVLPKNLTDFLDRVILFFGKRVYDVKHLMRFCASLYGGLDRVCKALNVERVIGKSHQAGSDSLLTLHAFLKIKDVYFGGDCENEKYTNVLHGLEVV 291
BLAST of EVM_prediction_HIC_ASM_8.780 vs. ExPASy TrEMBL
Match: B9HBR3|B9HBR3_POPTR (poly(A)-specific ribonuclease OS=Populus trichocarpa OX=3694 GN=POPTR_006G205600 PE=3 SV=1) HSP 1 Score: 398.282 bits (1022), Expect = 4.218e-137 Identity = 198/273 (72.53%), Postives = 229/273 (83.88%), Query Frame = 0 Query: 14 ILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRP---DSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHF----GNEYELQKYANVLHGLELLE 279
+LIR V+ NL EF+ IR+ IDRYP+ISMDTEFPG+VVRP D RHRDP A+Y LKANVDLLNLIQIGLT++DE+GNLPDLG +IWEFNF+DFD+A AHA DSVELL+RQGIDFEKNRE GIDSV+FAEL+MSSGLVLN+ V+WVTFH AYDFGYLVKCLT +VLPE L+EF+ V VFFG++VYD+KH+IRFC LYGGLDRVCK LGV+RV+GKSHQAGSDSLLTLHA+LKIKDK+F N+ L KYANVLHGLEL +
Sbjct: 23 VLIRSVWADNLEEEFKFIRSEIDRYPLISMDTEFPGIVVRPVAGDPYNRHRDPTAHYLSLKANVDLLNLIQIGLTIADEDGNLPDLGFKDLCFIWEFNFRDFDVAHDAHAHDSVELLRRQGIDFEKNRELGIDSVKFAELMMSSGLVLNQSVSWVTFHCAYDFGYLVKCLTHKVLPEGLNEFLGLVRVFFGDRVYDIKHIIRFCAGLYGGLDRVCKELGVDRVIGKSHQAGSDSLLTLHAYLKIKDKYFFKDKDNDRGLDKYANVLHGLELFD 295
BLAST of EVM_prediction_HIC_ASM_8.780 vs. ExPASy TrEMBL
Match: A0A6M2E845|A0A6M2E845_9ROSI (poly(A)-specific ribonuclease OS=Populus davidiana OX=266767 PE=3 SV=1) HSP 1 Score: 396.356 bits (1017), Expect = 2.335e-136 Identity = 199/289 (68.86%), Postives = 233/289 (80.62%), Query Frame = 0 Query: 2 SDVPPPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRP---DSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYE---------LQKYANVLHGLELL 278
SD PPQ K ++IR V+ NL EF+ IR+ IDRYP+ISMDTEFPG+VVRP D RH P A+Y LKANVDLLNLIQIGLT++DE+GNLPDLG +IWEFNF+DFD+AR AHA DSVELL+RQGIDFEKNRE GIDSVRFAEL+MSSGLVLN V+WVTFH AYDFGYLVKCLTQ++LPE+L+EF RV V+FG +VYD+KH++RFC L+GGLDRVCK LGV+RV+GKSHQAGSDSLLTLHA+LKIKDK+F N+ + L KYANV +GLEL
Sbjct: 4 SDEQPPQRAKT-VVIRSVWADNLEEEFKLIRSEIDRYPLISMDTEFPGIVVRPAAGDPYNRHSGPRAHYLSLKANVDLLNLIQIGLTIADEDGNLPDLGLKDVGFIWEFNFRDFDVARDAHAHDSVELLRRQGIDFEKNRELGIDSVRFAELMMSSGLVLNHSVSWVTFHCAYDFGYLVKCLTQKILPEELNEFFERVRVYFGNRVYDIKHIMRFCGNLHGGLDRVCKELGVDRVIGKSHQAGSDSLLTLHAYLKIKDKYFLNDKDDGGGGAGGGLDKYANVFYGLELF 291
BLAST of EVM_prediction_HIC_ASM_8.780 vs. ExPASy TrEMBL
Match: A0A8T2YIH2|A0A8T2YIH2_POPDE (poly(A)-specific ribonuclease OS=Populus deltoides OX=3696 GN=H0E87_012145 PE=3 SV=1) HSP 1 Score: 395.586 bits (1015), Expect = 4.687e-136 Identity = 196/273 (71.79%), Postives = 229/273 (83.88%), Query Frame = 0 Query: 14 ILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRP---DSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHF----GNEYELQKYANVLHGLELLE 279
+LIR V+ NL EF+ IR+ ID+YP+ISMDTEFPG+VVRP D RHRDP A+Y LKANVDLLNLIQIGLT++DE+GNLPDLG +IWEFNF+DFD+A AHA DSVELL+RQGIDFEKN E GIDSV+FAEL+MSSGLVLN+ V+WVTFH AYDFGYLVKCLT +VLPE L+EF+ V VFFG++VYD+KH+IRFC LYGGLDRVCK LGV+RV+GKSHQAGSDSLLTLHA+LKIKDK+F N+ L+KYANVLHGLEL +
Sbjct: 23 VLIRSVWADNLEEEFKFIRSEIDKYPLISMDTEFPGIVVRPVARDPYNRHRDPTAHYLSLKANVDLLNLIQIGLTIADEDGNLPDLGFKDLCFIWEFNFRDFDVAHDAHAHDSVELLRRQGIDFEKNWELGIDSVKFAELMMSSGLVLNQSVSWVTFHCAYDFGYLVKCLTHKVLPEGLNEFLELVRVFFGDRVYDIKHIIRFCAGLYGGLDRVCKELGVDRVIGKSHQAGSDSLLTLHAYLKIKDKYFFKDKDNDRVLEKYANVLHGLELFD 295
BLAST of EVM_prediction_HIC_ASM_8.780 vs. ExPASy TrEMBL
Match: A0A8T2WWS3|A0A8T2WWS3_POPDE (poly(A)-specific ribonuclease OS=Populus deltoides OX=3696 GN=H0E87_026983 PE=3 SV=1) HSP 1 Score: 395.586 bits (1015), Expect = 5.056e-136 Identity = 199/287 (69.34%), Postives = 233/287 (81.18%), Query Frame = 0 Query: 2 SDVPPPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRP---DSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYE-------LQKYANVLHGLELL 278
SD PPQ K ++IR V+ NL EF+ IR+ IDRYP+ISMDTEFPG+VVRP D RH P A+Y LKANVDLLNLIQIGLT++DE+GNLPDLG +IWEFNF+DFD+AR AHA DSVELL+RQGIDFEKNRE G+DSVRFAEL+MSSGLVLN V+WVTFH AYDFGYLVKCLTQ+VLPE+L+EF RV VFFG++VYD+KH++RFC L+GGLDRVCK L V+RV+GKSHQAGSDSLLTLHA+LKIKDK+F N+ + L KYANV +GLEL
Sbjct: 4 SDEQPPQRAKT-VVIRSVWADNLEEEFKLIRSEIDRYPLISMDTEFPGIVVRPAAGDPYNRHSGPRAHYLSLKANVDLLNLIQIGLTIADEDGNLPDLGLKDVGFIWEFNFRDFDVARDAHAHDSVELLRRQGIDFEKNRELGVDSVRFAELMMSSGLVLNHSVSWVTFHCAYDFGYLVKCLTQKVLPEELNEFFERVRVFFGDRVYDIKHIMRFCGNLHGGLDRVCKELEVDRVIGKSHQAGSDSLLTLHAYLKIKDKYFFNDKDGGGGGGGLDKYANVFYGLELF 289
BLAST of EVM_prediction_HIC_ASM_8.780 vs. ExPASy Swiss-Prot
Match: CAF1K_ARATH (Probable CCR4-associated factor 1 homolog 11 OS=Arabidopsis thaliana OX=3702 GN=CAF1-11 PE=2 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 2.397e-108 Identity = 161/268 (60.07%), Postives = 207/268 (77.24%), Query Frame = 0 Query: 14 ILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNI-RHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLG-SGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTC-LYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGLELL 278
I+IR+V+ +NL SEF+ IR +++ YP ISMDTEFPGV+ + D ++ R +P YN LK+NVD L+LIQ+GLTLSD +GNLPDLG + YIWEFNF+DFD+ R HA DS+ELL+R GIDFE+NR G++S RFAEL+MSSGL+ N+ V+WVTFHSAYDFGYLVK LT+R LP L EF+ + FFG++VYDVKH++RFC LYGGLDRV ++L V R VGK HQAGSDSLLT AF +++D +F E +K+A VL+GLE+
Sbjct: 12 IVIRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLDVLRRGNPNYLYNLLKSNVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLRRHGIDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVALREFLGLLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLTWQAFQRMRDLYF-VEDGAEKHAGVLYGLEVF 278
BLAST of EVM_prediction_HIC_ASM_8.780 vs. ExPASy Swiss-Prot
Match: CAF1I_ARATH (Probable CCR4-associated factor 1 homolog 9 OS=Arabidopsis thaliana OX=3702 GN=CAF1-9 PE=2 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 1.576e-106 Identity = 166/283 (58.66%), Postives = 210/283 (74.20%), Query Frame = 0 Query: 1 MSDVPPPQPPKP---RILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSG-STYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCT-CLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGLELL 278
M+ + P + KP ++ REV+ NL SEFE I +ID YP ISMDTEFPGV+ + S++R +P Y LKANVD L+LIQ+GLTLSD GNLPDLG +IWEFNF+DFD+AR AHA DS+ELL+RQGIDFE+N G++S RFAEL+MSSGLV N++V+WVTFHSAYDFGYL+K LT+R LP L EF + V FGE+VYDVKH+++FC L+GGLDRV + L V R VGK HQAGSDSLLT HAF +++D +F + +K+A VL+GLE+
Sbjct: 1 MAIIKPNRDLKPDGVTVVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFK--SDLRFTNPDDLYTLLKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLRRQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGALGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLTWHAFQRMRDLYFVQDGP-EKHAGVLYGLEVF 280
BLAST of EVM_prediction_HIC_ASM_8.780 vs. ExPASy Swiss-Prot
Match: CAF1J_ARATH (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=CAF1-10 PE=2 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 2.610e-93 Identity = 142/262 (54.20%), Postives = 193/262 (73.66%), Query Frame = 0 Query: 14 ILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGL 275
I+IREV+++NL+ EF IR ++D++ I+MDTEFPGVV++P + ++ + NY LK NVDLL LIQ+GLT SDE GNLP G+ + IW+FNF++F+I +A +S+ELL++ GIDF+KN E GID VRF EL+MSSG+VLN ++WVTFH YDFGYLVK LT + LP K ++F + V+F VYD+KHL+ FC L+GGL+R+ + +GVER VG HQAGSDSLLTL +F K+K+++F E KY VL+GL
Sbjct: 10 IMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDL-NYRTLKENVDLLKLIQVGLTFSDENGNLPTCGT-DKFCIWQFNFREFNIGEDIYASESIELLRQCGIDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQADFFKLLYVYF-PTVYDIKHLMTFCNGLFGGLNRLAELMGVER-VGICHQAGSDSLLTLGSFRKLKERYFPGSTE--KYTGVLYGL 265
BLAST of EVM_prediction_HIC_ASM_8.780 vs. ExPASy Swiss-Prot
Match: CAF1G_ARATH (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2) HSP 1 Score: 276.174 bits (705), Expect = 6.509e-92 Identity = 140/262 (53.44%), Postives = 189/262 (72.14%), Query Frame = 0 Query: 14 ILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGL 275
I IREV+ NL SE IR ++D +P ++MDTEFPG+V RP + + +Y LK NV++L +IQ+GLT SDE+GNLP G+ + Y IW+FNF++FD+ +A DS+ELL++ GIDF KN EFGIDS RFAELLMSSG+VLN++V WVTFHS YDFGYL+K LT + LPE + F + V+F +VYD+KHL++FC L+GGL+++ + L VER VG HQAGSDSLLT F K+++ F ++KY+ VL+GL
Sbjct: 10 IQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFK-TNTEYHYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMISVYF-PRVYDIKHLMKFCNSLHGGLNKLAELLDVER-VGICHQAGSDSLLTSCTFRKLQENFFIG--SMEKYSGVLYGL 266
BLAST of EVM_prediction_HIC_ASM_8.780 vs. ExPASy Swiss-Prot
Match: CAF1B_ARATH (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=CAF1-2 PE=1 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 9.980e-89 Identity = 143/281 (50.89%), Postives = 190/281 (67.62%), Query Frame = 0 Query: 1 MSDVPPPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVR-----PDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGLE 276
MS P P+ I IREV+ NL E I ID +P ++MDTEFPG+V + P+ N NY+ LKANV++L LIQ+GLTLSDE+GNLP G+ IW+FNF++F++ ALDS+ELL++ ID EKN E G+D+ RFAELLM SG+VLN + WVTFH YDFGYL+K L+ + LPE++S+F ++ FF VYD+K+L+ FCT LYGGL+++ + LGV+R VG SHQAGSDSLLTL F+K+K+ F L KY+ L GL+
Sbjct: 1 MSQAPNPEEEDDTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQC-IWQFNFREFNVISDMFALDSIELLRKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPEEISDFFDQMEKFF-PVVYDIKYLMGFCTNLYGGLEKIAELLGVKR-VGISHQAGSDSLLTLRTFIKMKEFFFTG--SLLKYSGFLFGLD 276
BLAST of EVM_prediction_HIC_ASM_8.780 vs. ExPASy Swiss-Prot
Match: CAF1F_ARATH (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=CAF1-6 PE=1 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.221e-86 Identity = 139/262 (53.05%), Postives = 185/262 (70.61%), Query Frame = 0 Query: 14 ILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGL 275
I IREV+ NL E + IR ++D +P ++MDTEFPG+VVRP + + +Y LK NV++L +IQ+GLT S+E+GNLP G+ Y IW+FNF++FD+ ALDS+ELLK+ GID KN GIDS RFAELLMSSG+VLN++V WVTFHS YDFGYL+K LT + LP+ ++F + V+F VYD+KHL++FC L+GGL+++ + L VER VG HQAGSDSLLT F K+K+ F L KY+ VL+GL
Sbjct: 10 IQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFK-SNADYHYETLKTNVNILKMIQLGLTFSNEQGNLPTCGT-DKYCIWQFNFREFDLDSDIFALDSIELLKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYF-PTVYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTFRKLKENFFVG--PLHKYSGVLYGL 265
BLAST of EVM_prediction_HIC_ASM_8.780 vs. ExPASy Swiss-Prot
Match: CNOT8_HUMAN (CCR4-NOT transcription complex subunit 8 OS=Homo sapiens OX=9606 GN=CNOT8 PE=1 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 3.582e-69 Identity = 121/270 (44.81%), Postives = 169/270 (62.59%), Query Frame = 0 Query: 6 PPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGL 275
P + +I EV+ NL E +IR ++ Y I+MDTEFPGVVVRP R Y L+ NVDLL +IQ+GLT ++E+G P S W+FNFK F++ ++ DS++LL G+ F+K+ E GID++ FAELLM+SG+VL +V W++FHS YDFGY+VK LT LPE+ EF + +FF +YDVK+L++ C L GGL V L ++R +G+ HQAGSDSLLT AF ++K+ F + + KY L+GL
Sbjct: 2 PAALVENSQVICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFR-SSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYP-----SGINTWQFNFK-FNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFF-PSIYDVKYLMKSCKNLKGGLQEVADQLDLQR-IGRQHQAGSDSLLTGMAFFRMKELFFEDSIDDAKYCGRLYGL 262
BLAST of EVM_prediction_HIC_ASM_8.780 vs. ExPASy Swiss-Prot
Match: CNOT8_MOUSE (CCR4-NOT transcription complex subunit 8 OS=Mus musculus OX=10090 GN=Cnot8 PE=1 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 4.402e-69 Identity = 121/270 (44.81%), Postives = 169/270 (62.59%), Query Frame = 0 Query: 6 PPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGL 275
P + +I EV+ NL E +IR ++ Y I+MDTEFPGVVVRP R Y L+ NVDLL +IQ+GLT ++E+G P S W+FNFK F++ ++ DS++LL G+ F+K+ E GID++ FAELLM+SG+VL +V W++FHS YDFGY+VK LT LPE+ EF + +FF +YDVK+L++ C L GGL V L ++R +G+ HQAGSDSLLT AF ++K+ F + + KY L+GL
Sbjct: 2 PAALVENSQVICEVWASNLEEEMRKIREIVLSYSYIAMDTEFPGVVVRPIGEFR-SSIDYQYQLLRCNVDLLKIIQLGLTFTNEKGEYP-----SGINTWQFNFK-FNLTEDMYSQDSIDLLANSGLQFQKHEEEGIDTLHFAELLMTSGVVLCDNVKWLSFHSGYDFGYMVKLLTDSRLPEEEHEFFHILNLFF-PSIYDVKYLMKSCKNLKGGLQEVADQLDLQR-IGRQHQAGSDSLLTGMAFFRMKELFFEDSIDDAKYCGRLYGL 262
BLAST of EVM_prediction_HIC_ASM_8.780 vs. ExPASy Swiss-Prot
Match: CAF1_SCHPO (Poly(A) ribonuclease pop2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=caf1 PE=1 SV=2) HSP 1 Score: 218.009 bits (554), Expect = 3.240e-68 Identity = 118/260 (45.38%), Postives = 165/260 (63.46%), Query Frame = 0 Query: 16 IREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGL 275
IR+V+ NL E I +LI+RYP++SMDTEFPGVV RP + D +Y L+ANVD L +IQIGL LSDEEGN P W+FNF F++ +A +S+ELL + GIDF+K++E GI+ FAELL+ SGLVL ++VTW+TFHS YDF YL+K +TQ LP + EF + ++F K YD+K++++ GL + L + R +G HQAGSD+LLT F +I+ ++F + + N L+GL
Sbjct: 25 IRDVWSTNLQQEMNLIMSLIERYPVVSMDTEFPGVVARPLGVFKSSD-DYHYQTLRANVDSLKIIQIGLALSDEEGNAPVEAC-----TWQFNFT-FNLQDDMYAPESIELLTKSGIDFKKHQEVGIEPADFAELLIGSGLVLQEEVTWITFHSGYDFAYLLKAMTQIPLPAEYEEFYKILCIYF-PKNYDIKYIMKSVLNNSKGLQDIADDLQIHR-IGPQHQAGSDALLTARIFFEIRSRYFDGSID-SRMLNQLYGL 274
BLAST of EVM_prediction_HIC_ASM_8.780 vs. ExPASy Swiss-Prot
Match: CNOT7_MOUSE (CCR4-NOT transcription complex subunit 7 OS=Mus musculus OX=10090 GN=Cnot7 PE=1 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 4.450e-68 Identity = 121/260 (46.54%), Postives = 166/260 (63.85%), Query Frame = 0 Query: 16 IREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGL 275
I EV+ NL E ++IR +I +Y ++MDTEFPGVV RP R + Y L+ NVDLL +IQ+GLT +E+G P S W+FNFK F++ +A DS+ELL GI F+K+ E GI++ FAELLM+SG+VL + V W++FHS YDFGYL+K LT LPE+ +F + +FF +YDVK+L++ C L GGL V + L +ER +G HQAGSDSLLT AF K+++ F + + KY L+GL
Sbjct: 12 ICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFR-SNADYQYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTS-----TWQFNFK-FNLTEDMYAQDSIELLTTSGIQFKKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFEILRLFF-PVIYDVKYLMKSCKNLKGGLQEVAEQLELER-IGPQHQAGSDSLLTGMAFFKMREMFFEDHIDDAKYCGHLYGL 262
BLAST of EVM_prediction_HIC_ASM_8.780 vs. Araport11
Match: | (Symbols: AtCAF1b, CAF1b | CCR4- associated factor 1b | chr5:7365605-7366441 REVERSE LENGTH=278) HSP 1 Score: 318.161 bits (814), Expect = 2.514e-109 Identity = 161/268 (60.07%), Postives = 207/268 (77.24%), Query Frame = 0 Query: 14 ILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNI-RHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLG-SGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTC-LYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGLELL 278
I+IR+V+ +NL SEF+ IR +++ YP ISMDTEFPGV+ + D ++ R +P YN LK+NVD L+LIQ+GLTLSD +GNLPDLG + YIWEFNF+DFD+ R HA DS+ELL+R GIDFE+NR G++S RFAEL+MSSGL+ N+ V+WVTFHSAYDFGYLVK LT+R LP L EF+ + FFG++VYDVKH++RFC LYGGLDRV ++L V R VGK HQAGSDSLLT AF +++D +F E +K+A VL+GLE+
Sbjct: 12 IVIRDVWAYNLESEFDLIRGIVEDYPFISMDTEFPGVIYKADLDVLRRGNPNYLYNLLKSNVDALSLIQVGLTLSDADGNLPDLGGQKNRRYIWEFNFRDFDVERDPHAPDSIELLRRHGIDFERNRREGVESERFAELMMSSGLICNESVSWVTFHSAYDFGYLVKILTRRQLPVALREFLGLLRAFFGDRVYDVKHIMRFCEQRLYGGLDRVARSLEVNRAVGKCHQAGSDSLLTWQAFQRMRDLYF-VEDGAEKHAGVLYGLEVF 278
BLAST of EVM_prediction_HIC_ASM_8.780 vs. Araport11
Match: | (Symbols: AtCAF1a, CAF1a | CCR4- associated factor 1a | chr3:15952213-15953055 REVERSE LENGTH=280) HSP 1 Score: 313.538 bits (802), Expect = 1.653e-107 Identity = 166/283 (58.66%), Postives = 210/283 (74.20%), Query Frame = 0 Query: 1 MSDVPPPQPPKP---RILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSG-STYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCT-CLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGLELL 278
M+ + P + KP ++ REV+ NL SEFE I +ID YP ISMDTEFPGV+ + S++R +P Y LKANVD L+LIQ+GLTLSD GNLPDLG +IWEFNF+DFD+AR AHA DS+ELL+RQGIDFE+N G++S RFAEL+MSSGLV N++V+WVTFHSAYDFGYL+K LT+R LP L EF + V FGE+VYDVKH+++FC L+GGLDRV + L V R VGK HQAGSDSLLT HAF +++D +F + +K+A VL+GLE+
Sbjct: 1 MAIIKPNRDLKPDGVTVVTREVWAENLESEFELISEIIDDYPFISMDTEFPGVIFK--SDLRFTNPDDLYTLLKANVDALSLIQVGLTLSDVNGNLPDLGDDLHRGFIWEFNFRDFDVARDAHAPDSIELLRRQGIDFERNCRDGVESERFAELMMSSGLVCNEEVSWVTFHSAYDFGYLMKILTRRELPGALGEFKRVMRVLFGERVYDVKHMMKFCERRLFGGLDRVARTLEVNRAVGKCHQAGSDSLLTWHAFQRMRDLYFVQDGP-EKHAGVLYGLEVF 280
BLAST of EVM_prediction_HIC_ASM_8.780 vs. Araport11
Match: | (Symbols: CAF1i | CCR4-associated factor 1i | chr5:3464581-3465414 FORWARD LENGTH=277) HSP 1 Score: 280.026 bits (715), Expect = 2.736e-94 Identity = 142/262 (54.20%), Postives = 193/262 (73.66%), Query Frame = 0 Query: 14 ILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGL 275
I+IREV+++NL+ EF IR ++D++ I+MDTEFPGVV++P + ++ + NY LK NVDLL LIQ+GLT SDE GNLP G+ + IW+FNF++F+I +A +S+ELL++ GIDF+KN E GID VRF EL+MSSG+VLN ++WVTFH YDFGYLVK LT + LP K ++F + V+F VYD+KHL+ FC L+GGL+R+ + +GVER VG HQAGSDSLLTL +F K+K+++F E KY VL+GL
Sbjct: 10 IMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDL-NYRTLKENVDLLKLIQVGLTFSDENGNLPTCGT-DKFCIWQFNFREFNIGEDIYASESIELLRQCGIDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQADFFKLLYVYF-PTVYDIKHLMTFCNGLFGGLNRLAELMGVER-VGICHQAGSDSLLTLGSFRKLKERYFPGSTE--KYTGVLYGL 265
BLAST of EVM_prediction_HIC_ASM_8.780 vs. Araport11
Match: | (Symbols: CAF1k | CCR4-associated factor 1k | chr2:13640829-13641656 REVERSE LENGTH=275) HSP 1 Score: 276.174 bits (705), Expect = 6.821e-93 Identity = 140/262 (53.44%), Postives = 189/262 (72.14%), Query Frame = 0 Query: 14 ILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGL 275
I IREV+ NL SE IR ++D +P ++MDTEFPG+V RP + + +Y LK NV++L +IQ+GLT SDE+GNLP G+ + Y IW+FNF++FD+ +A DS+ELL++ GIDF KN EFGIDS RFAELLMSSG+VLN++V WVTFHS YDFGYL+K LT + LPE + F + V+F +VYD+KHL++FC L+GGL+++ + L VER VG HQAGSDSLLT F K+++ F ++KY+ VL+GL
Sbjct: 10 IQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFK-TNTEYHYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIELLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMISVYF-PRVYDIKHLMKFCNSLHGGLNKLAELLDVER-VGICHQAGSDSLLTSCTFRKLQENFFIG--SMEKYSGVLYGL 266
BLAST of EVM_prediction_HIC_ASM_8.780 vs. Araport11
Match: | (Symbols: CAF1h | CCR4-associated factor 1h | chr1:5469962-5470822 FORWARD LENGTH=286) HSP 1 Score: 268.47 bits (685), Expect = 1.045e-89 Identity = 143/281 (50.89%), Postives = 190/281 (67.62%), Query Frame = 0 Query: 1 MSDVPPPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVR-----PDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGLE 276
MS P P+ I IREV+ NL E I ID +P ++MDTEFPG+V + P+ N NY+ LKANV++L LIQ+GLTLSDE+GNLP G+ IW+FNF++F++ ALDS+ELL++ ID EKN E G+D+ RFAELLM SG+VLN + WVTFH YDFGYL+K L+ + LPE++S+F ++ FF VYD+K+L+ FCT LYGGL+++ + LGV+R VG SHQAGSDSLLTL F+K+K+ F L KY+ L GL+
Sbjct: 1 MSQAPNPEEEDDTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQC-IWQFNFREFNVISDMFALDSIELLRKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPEEISDFFDQMEKFF-PVVYDIKYLMGFCTNLYGGLEKIAELLGVKR-VGISHQAGSDSLLTLRTFIKMKEFFFTG--SLLKYSGFLFGLD 276
BLAST of EVM_prediction_HIC_ASM_8.780 vs. Araport11
Match: | (Symbols: CAF1h | CCR4-associated factor 1h | chr1:5469962-5470822 FORWARD LENGTH=286) HSP 1 Score: 268.47 bits (685), Expect = 1.045e-89 Identity = 143/281 (50.89%), Postives = 190/281 (67.62%), Query Frame = 0 Query: 1 MSDVPPPQPPKPRILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVR-----PDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGLE 276
MS P P+ I IREV+ NL E I ID +P ++MDTEFPG+V + P+ N NY+ LKANV++L LIQ+GLTLSDE+GNLP G+ IW+FNF++F++ ALDS+ELL++ ID EKN E G+D+ RFAELLM SG+VLN + WVTFH YDFGYL+K L+ + LPE++S+F ++ FF VYD+K+L+ FCT LYGGL+++ + LGV+R VG SHQAGSDSLLTL F+K+K+ F L KY+ L GL+
Sbjct: 1 MSQAPNPEEEDDTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQC-IWQFNFREFNVISDMFALDSIELLRKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPEEISDFFDQMEKFF-PVVYDIKYLMGFCTNLYGGLEKIAELLGVKR-VGISHQAGSDSLLTLRTFIKMKEFFFTG--SLLKYSGFLFGLD 276
BLAST of EVM_prediction_HIC_ASM_8.780 vs. Araport11
Match: | (Symbols: CAF1j | CCR4-associated factor 1j | chr1:30358517-30359341 FORWARD LENGTH=274) HSP 1 Score: 262.692 bits (670), Expect = 1.279e-87 Identity = 139/262 (53.05%), Postives = 185/262 (70.61%), Query Frame = 0 Query: 14 ILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGL 275
I IREV+ NL E + IR ++D +P ++MDTEFPG+VVRP + + +Y LK NV++L +IQ+GLT S+E+GNLP G+ Y IW+FNF++FD+ ALDS+ELLK+ GID KN GIDS RFAELLMSSG+VLN++V WVTFHS YDFGYL+K LT + LP+ ++F + V+F VYD+KHL++FC L+GGL+++ + L VER VG HQAGSDSLLT F K+K+ F L KY+ VL+GL
Sbjct: 10 IQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFK-SNADYHYETLKTNVNILKMIQLGLTFSNEQGNLPTCGT-DKYCIWQFNFREFDLDSDIFALDSIELLKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYF-PTVYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTFRKLKENFFVG--PLHKYSGVLYGL 265
BLAST of EVM_prediction_HIC_ASM_8.780 vs. Araport11
Match: | (Symbols: CAF1j | CCR4-associated factor 1j | chr1:30358517-30359341 FORWARD LENGTH=274) HSP 1 Score: 262.692 bits (670), Expect = 1.279e-87 Identity = 139/262 (53.05%), Postives = 185/262 (70.61%), Query Frame = 0 Query: 14 ILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGL 275
I IREV+ NL E + IR ++D +P ++MDTEFPG+VVRP + + +Y LK NV++L +IQ+GLT S+E+GNLP G+ Y IW+FNF++FD+ ALDS+ELLK+ GID KN GIDS RFAELLMSSG+VLN++V WVTFHS YDFGYL+K LT + LP+ ++F + V+F VYD+KHL++FC L+GGL+++ + L VER VG HQAGSDSLLT F K+K+ F L KY+ VL+GL
Sbjct: 10 IQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFK-SNADYHYETLKTNVNILKMIQLGLTFSNEQGNLPTCGT-DKYCIWQFNFREFDLDSDIFALDSIELLKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYF-PTVYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTFRKLKENFFVG--PLHKYSGVLYGL 265
BLAST of EVM_prediction_HIC_ASM_8.780 vs. Araport11
Match: | (Symbols: CAF1j | CCR4-associated factor 1j | chr1:30358517-30359583 FORWARD LENGTH=286) HSP 1 Score: 263.077 bits (671), Expect = 1.729e-87 Identity = 139/262 (53.05%), Postives = 185/262 (70.61%), Query Frame = 0 Query: 14 ILIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAANYNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGIDSVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCLYGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIKDKHFGNEYELQKYANVLHGL 275
I IREV+ NL E + IR ++D +P ++MDTEFPG+VVRP + + +Y LK NV++L +IQ+GLT S+E+GNLP G+ Y IW+FNF++FD+ ALDS+ELLK+ GID KN GIDS RFAELLMSSG+VLN++V WVTFHS YDFGYL+K LT + LP+ ++F + V+F VYD+KHL++FC L+GGL+++ + L VER VG HQAGSDSLLT F K+K+ F L KY+ VL+GL
Sbjct: 10 IQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFK-SNADYHYETLKTNVNILKMIQLGLTFSNEQGNLPTCGT-DKYCIWQFNFREFDLDSDIFALDSIELLKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYF-PTVYDIKHLMKFCNSLHGGLNKLAELLEVER-VGICHQAGSDSLLTSCTFRKLKENFFVG--PLHKYSGVLYGL 265
BLAST of EVM_prediction_HIC_ASM_8.780 vs. Araport11
Match: | (Symbols: CAF1g | CCR4-associated factor 1g | chr1:1965924-1967006 FORWARD LENGTH=360) HSP 1 Score: 137.887 bits (346), Expect = 4.519e-38 Identity = 90/247 (36.44%), Postives = 133/247 (53.85%), Query Frame = 0 Query: 15 LIREVFEFNLISEFERIRALIDRYPIISMDTEFPGVVVRPDSNIRHRDPAAN--YNGLKANVDLLNLIQIGLTLSDEEGNLPDLGSGSTYYIWEFNFKDFDIARHAHALDSVELLKRQGIDFEKNREFGID--SVRFAELLMSSGLVLNKDVTWVTFHSAYDFGYLVKCLTQRVLPEKLSEFVTRVGVFFGEKVYDVKHLIRFCTCL--YGGLDRVCKALGVERVVGKSHQAGSDSLLTLHAFLKIK 255
L R V+ N+ E R+ + R+P+I+ DTE+PG++ R + D +++ Y +K NV+ LIQ G TL + +G ++G +WE NF +F S+E L+R G+D +K R+ G+D F LM+ K V +VTF AYDF Y + L LPE EF T V FG+ VYD K + FC L + GL ++ + L + R VG++H AGSDSL+T F+K+K
Sbjct: 8 LARRVWRSNVDEEMARMAECLKRFPLIAFDTEYPGIIFR-----TYFDSSSDECYRAMKGNVENTKLIQCGFTLFNAKG---EIGG-----VWEINFSNFGDPSDTRNELSIEFLRRHGLDLQKIRDEGVDMFGYGFFPKLMTV-FRSQKHVEFVTFQGAYDFAYFLSILNHGKLPETHGEFATEVVKVFGQ-VYDTKVMAGFCEGLGEHLGLSKLAQLLQITR-VGRAHHAGSDSLMTALVFIKLK 238 The following BLAST results are available for this feature:
BLAST of EVM_prediction_HIC_ASM_8.780 vs. ExPASy TrEMBL
Analysis Date: 2024-01-25 (Blastp of Citrus sinensis cv. Gannanzao v1.0 proteins vs UniProt TrEMBL) Total hits: 10 Position : 0 Zoom : x 1
BLAST of EVM_prediction_HIC_ASM_8.780 vs. ExPASy Swiss-Prot
Analysis Date: 2023-08-23 (Blastp of Citrus sinensis cv. Newhall v1.0 proteins vs UniProt Swissprot) Total hits: 10 Position : 0 Zoom : x 1
BLAST of EVM_prediction_HIC_ASM_8.780 vs. Araport11
Analysis Date: 2024-01-25 (Blastp of Citrus sinensis cv. Gannanzao v1.0 proteins vs Araport11) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan Analysis for Citrus sinensis cv. Gannanzao v1.0 proteins
Date Performed: 2024-01-25 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >evm.model.HIC_ASM_8.780-csg_v1 ID=evm.model.HIC_ASM_8.780-csg_v1; Name=EVM_prediction_HIC_ASM_8.780; organism=Citrus sinensis; type=mRNA; length=843bpback to top protein sequence of evm.model.HIC_ASM_8.780-csg_v1 >evm.model.HIC_ASM_8.780-csg_v1 ID=evm.model.HIC_ASM_8.780-csg_v1; Name=evm.model.HIC_ASM_8.780-csg_v1; organism=Citrus sinensis; type=polypeptide; length=281bpback to top mRNA from alignment at HIC_ASM_8:5512925..5513947+ Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.> ID=; Name=; organism= ; type=; length=1023bp; location=Sequence derived from: HIC_ASM_8:5512925..5513947+ (Citrus sinensisback to top Coding sequence (CDS) from alignment at HIC_ASM_8:5512925..5513947+ >evm.model.HIC_ASM_8.780-csg_v1 ID=evm.model.HIC_ASM_8.780-csg_v1; Name=EVM_prediction_HIC_ASM_8.780; organism=Citrus sinensis; type=CDS; length=843bp; location=Sequence derived from: HIC_ASM_8:5512925..5513947+ (Citrus sinensisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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