Poncirus trifoliata acc. ZK8 v1.0 (HZAU)

Analysis NamePoncirus trifoliata acc. ZK8 v1.0 (HZAU)
MethodPacBio, Illumina (Assembly with Falcon, Quiver, Pilon)
SourceHuazhong Agriculture University
Date performed2023-04-10

About the assembly

For this genome, please cite Huang et al, Genome of a citrus rootstock and global DNA demethylation caused by heterografting.  This data was downloaded from the Citrus Pan-genome to Breeding Database website.  This data is also on NCBI under BioProject PRJNA554539 and the assembly accession number is GCA_018350135.1.  The listed BioSample isolate designation is ZK8.

Assembly metrics

Assembly size 303 Mb
Number of scaffolds 10
N50 30,282,837 bp
Predicted transcripts 39,675
Annotated genes 25,680
Assembly BUSCO score (embryophyta_odb10) 98.6%
Annotation BUSCO score (embryophyta_odb10) 93.4%

To download the genome assembly and annotation files, please see the CGD data repository.