Publication Datasets

CGD Accession Reference Data File(s)
CGD23002

Upuli Nakandala, Ardashir Kharabian Masouleh, Malcolm W. Smith, Agnelo Furtado, Patrick Mason, Lena Constantin, Robert J. Henry. Haplotype resolved chromosome level genome assembly of Citrus australis reveals disease resistance and other citrus specific genes. Horticulture research. 2023. (Submitted).  Corresponding author: Upuli Nakandala, u.nakandala@uq.edu.au

Data not yet public
CGD23001 Khushwant Singh, Tara Rickman, Jong-Wong Park, Matthew Huff, Jianyang Liu, Manjunath L. Keremane, Robert R. Krueger, Ping Zheng, Jodi Humann, Madhurababu Kunta, Margaret Staton, Chris Dardick, Mikeal Roose, Dorrie Main, Chandrika Ramadugu. Chromosome-scale, de novo, phased genome assemblies of three Australian limes, Citrus australasica, C. inodora, and C. glauca, towards finding insights into disease resistance to citrus huanglongbing. In preparation.  Corresponding author:  Chandrika Ramadugu, chandram@ucr.edu Project Information
CGD22001

Luis Carlos Ramos Aguila, Jessica Paola Sánchez Moreano, Komivi Senyo Akutse, Bamisope Steve Bamisile, Juxiu Liu, Fasih Ullah Haider, Hafiza Javaira Ashraf, Liande Wang. Comprehensive genome-wide identification and expression profiling of ADF gene family in Citrus sinensis, induced by endophytic colonization of Beauveria bassiana. Accepted. Corresponding author: Luis Ramos, luisramosaguila@gmail.com

Data Files

CGD21001 Guardo MD, Moretto M, Moser M, Catalano C, Troggio M, Deng Z, Cestaro A, Caruso M, Distefano G, La Malfa S, Bianco L, Gentile A. The haplotype-resolved reference genome of lemon (Citrus limon L. Burm f.). Tree Genetics & Genomes. 2021 Nov 09; 17:46.

Primary

Alternative

CGD17001 Curtolo M, Cristofani-Yaly M, Gazaffi R, Takita MA, Figueira A, Machado MA. QTL mapping for fruit quality in Citrus using DArTseq markers. BMC Genomics. 2017; 18(289). Genotyping data file
CGD16001 Raga V, Intrigliolo DS, Bernet GP, Carbonell EA, Asins MJ. Genetic analysis of salt tolerance in a progeny derived from the citrus rootstocks Cleopatra mandarin and trifoliate orange. Tree Genetics & Genomes. 2016; 12:34.  Data in CGD
CGD15001 Ohta S, Endo T, Shimada T, Fujii H, Shimizu T, Kita M, Kuniga T, Yoshioka T, Nesumi H, Yoshida T, Omura M. Construction of genetic linkage map and graphical genotyping of pseudo-backcrossed F2 (BC’2) progeny to introduce a CTV resistance from Poncirus trifoliata (L.) Raf. into Citrus by introgression breeding. Tree Genetics & Genomes. 2015; 11:797. Data in CGD