Citrus inodora genome v1.0 (UQ)
Overview
CGD Accession: CGD24001 Citation: Nakandala U, Furtado A, Masouleh AK, Smith MW, Mason P, Williams DC, Henry RJ. The genomes of Australian wild limes. Plant molecular biology. 2024 Sep 24; 114(5):102.
Collapsed Assembly Metrics
Assembly
The Citrus inodora UQ genome v1.0 assembly files are available in GFF3 and FASTA format. Downloads
Gene Predictions
The Citrus inodora UQ v1.0 genome gene prediction files are available in GFF3 and FASTA format. Downloads
Functional Analysis
Functional annotation for the Citrus inodora UQ genome v1.0 are available for download below. The Citrus inodora genome v1.0 proteins were analyzed using InterProScan in order to assign InterPro domains and Gene Ontology (GO) terms. Pathways analysis was performed using the KEGG Automatic Annotation Server (KAAS). Downloads
Homology
Homology of the Citrus inodora UQ genome v1.0 proteins was determined by pairwise sequence comparison using the blastp algorithm against various protein databases. An expectation value cutoff less than 1e-6 for the Arabidoposis proteins (Araport11, 2022-09), UniProtKB/SwissProt (Release 2024-03), and UniProtKB/TrEMBL (Release 2024-03) databases. The best hit reports are available for download in Excel format. Protein Homologs
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