Citrus sinensis cv. Newhall v1.0 genome

Overview
Analysis NameCitrus sinensis cv. Newhall v1.0 genome
MethodIllumina NovaSeq, PacBio HiFi, Hi-C (Assembly with Hifiasm v0.15.4)
SourceZenodo
Date performed2023-08-01

 

About the assembly

For this genome, please cite Gao et al, Citrus genomic resources unravel putative genetic determinants of Huanglongbing pathogenicity. This data was originally downloaded from Zenodo.

Assembly metrics

Assembly size 685 Mb
Number of scaffolds 1013
N50 32,860,738 bp
Predicted transcripts 46,670
Annotated genes 46,670
Assembly BUSCO score (embryophyta_odb10) 99.0%
Annotation BUSCO score (embryophyta_odb10) 96.4%