Expression: Flavonoid biosynthesis in C. sinensis cv. Newhall on different rootstock

Overview
Analysis NameExpression: Flavonoid biosynthesis in C. sinensis cv. Newhall on different rootstock
MethodIllumina NovaSeq 6000 (StringTie)
SourcePRJNA953932
Date performed2023-09-19

This data is from the following manuscript:  Li Q, Yao J, Zheng W, Wang J, Liao L, Sun G, Wang X, Deng H, Zhang M, Wang Z, Xiong B. Hetero-grafting affects flavonoid biosynthesis in sweet orange 'Newhall' (Citrus sinensis) peels: a metabolomics and transcriptomics analysis. Frontiers in plant science. 2023; 14:1218426.  NCBI BioProject PRJNA953932.  Expression values are in FPKM.  CT = C. sinensis cv. Newhall grafted onto P. trifoliata rootstock.  CJ = C. sinensis cv. Newhall grafted onto C. junos Siebold ex Tanaka rootstock.

 

Sample Tissue Development stage
CT1-1_Aug Peel Fruit expansion period, August
CT1-2_Aug Peel Fruit expansion period, August
CT1-3_Aug Peel Fruit expansion period, August
CJ1-1_Aug Peel Fruit expansion period, August
CJ1-2_Aug Peel Fruit expansion period, August
CJ1-3_Aug Peel Fruit expansion period, August
CT2-1_Sept Peel Fruit late expansion period, September
CT2-2_Sept Peel Fruit late expansion period, September
CT2-3_Sept Peel Fruit late expansion period, September
CJ2-1_Sept Peel Fruit late expansion period, September
CJ2-2_Sept Peel Fruit late expansion period, September
CJ2-3_Sept Peel Fruit late expansion period, September
CT3-1_Nov Peel Fruit maturity period, November
CT3-2_Nov Peel Fruit maturity period, November
CT3-3_Nov Peel Fruit maturity period, November
CJ3-1_Nov Peel Fruit maturity period, November
CJ3-2_Nov Peel Fruit maturity period, November
CJ3-3_Nov Peel Fruit maturity period, November
Properties
Additional information about this analysis:
Property NameValue
Data source filepublic://expression/650a2728ea447_15270-expression.txt