DY270350
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY270350 vs. ExPASy Swiss-Prot
Match: RS32_XENLA (40S ribosomal protein S3-B OS=Xenopus laevis GN=rps3-B PE=2 SV=1) HSP 1 Score: 285.804 bits (730), Expect = 5.804e-84 Identity = 147/168 (87.50%), Postives = 153/168 (91.07%), Query Frame = 3 Query: 18 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 521 MA Q+SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP +TEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+ Sbjct: 1 MAAQMSKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTQTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYV 168 HSP 2 Score: 46.595 bits (109), Expect = 5.804e-84 Identity = 27/55 (49.09%), Postives = 33/55 (60.00%), Query Frame = 1 Query: 526 SAVRHVLLRQGVLGIQVNILLGWDQKGQARANHTLCLIWVTIHPPEGKSVVVPTT 690 +AVRHVLLRQGVLGI+V I+L WD G+ L + P K +VPTT Sbjct: 170 TAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEP---KDEIVPTT 221
BLAST of DY270350 vs. ExPASy Swiss-Prot
Match: RS3_PONAB (40S ribosomal protein S3 OS=Pongo abelii GN=RPS3 PE=2 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 7.572e-84 Identity = 148/168 (88.10%), Postives = 153/168 (91.07%), Query Frame = 3 Query: 18 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 521 MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAE+V RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+ Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYV 168 HSP 2 Score: 45.0542 bits (105), Expect = 7.572e-84 Identity = 26/55 (47.27%), Postives = 33/55 (60.00%), Query Frame = 1 Query: 526 SAVRHVLLRQGVLGIQVNILLGWDQKGQARANHTLCLIWVTIHPPEGKSVVVPTT 690 +AVRHVLLRQGVLGI+V I+L WD G+ L + P K ++PTT Sbjct: 170 TAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEP---KDEILPTT 221
BLAST of DY270350 vs. ExPASy Swiss-Prot
Match: RS3_ICTPU (40S ribosomal protein S3 OS=Ictalurus punctatus GN=rps3 PE=2 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 1.680e-83 Identity = 147/168 (87.50%), Postives = 152/168 (90.48%), Query Frame = 3 Query: 18 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 521 MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FP SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PVN Y+ Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPRGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYV 168 HSP 2 Score: 45.4394 bits (106), Expect = 1.680e-83 Identity = 26/55 (47.27%), Postives = 33/55 (60.00%), Query Frame = 1 Query: 526 SAVRHVLLRQGVLGIQVNILLGWDQKGQARANHTLCLIWVTIHPPEGKSVVVPTT 690 +AVRHVLLRQGVLGI+V I+L WD G+ L + P K ++PTT Sbjct: 170 TAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEP---KEEILPTT 221
BLAST of DY270350 vs. ExPASy Swiss-Prot
Match: RS3_MANSE (40S ribosomal protein S3 OS=Manduca sexta GN=RpS3 PE=2 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 5.812e-81 Identity = 141/164 (85.98%), Postives = 148/164 (90.24%), Query Frame = 3 Query: 30 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 521 ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEKGRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+ Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV 169 HSP 2 Score: 46.2098 bits (108), Expect = 5.812e-81 Identity = 20/29 (68.97%), Postives = 26/29 (89.66%), Query Frame = 1 Query: 523 HSAVRHVLLRQGVLGIQVNILLGWDQKGQ 609 ++A RHVLLRQGVLGI+V I+L WDQ+G+ Sbjct: 170 NTATRHVLLRQGVLGIKVKIMLPWDQQGK 198
BLAST of DY270350 vs. ExPASy Swiss-Prot
Match: RS3_SCHPO (40S ribosomal protein S3 OS=Schizosaccharomyces pombe GN=rps3 PE=1 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 1.837e-76 Identity = 133/167 (79.64%), Postives = 150/167 (89.82%), Query Frame = 3 Query: 21 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 521 A ISKKRKFVADGVF+AELNE TREL+E+GYSG EVRVTP R+EIIIRAT TQ+VLGEKGRRIRELT++VQKRFKF EN+VELYAEKV NRGLCA+AQ ESLRYKLL GLAVRRA YGVLR++ME+GAKGCEV++SGKLRA RAKSMKF DG+MI SGQP ++I Sbjct: 4 AFTISKKRKFVADGVFYAELNEFFTRELSEEGYSGCEVRVTPSRSEIIIRATHTQDVLGEKGRRIRELTALVQKRFKFAENTVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRRAAYGVLRYVMEAGAKGCEVVISGKLRAARAKSMKFADGFMIHSGQPAVDFI 170 HSP 2 Score: 40.4318 bits (93), Expect = 1.837e-76 Identity = 24/55 (43.64%), Postives = 33/55 (60.00%), Query Frame = 1 Query: 526 SAVRHVLLRQGVLGIQVNILLGWDQKGQARANHTLCLIWVTIHPPEGKSVVVPTT 690 SA RHVLLRQGVLG++V I+L + + R +L I V + P E + + P T Sbjct: 172 SATRHVLLRQGVLGVKVKIML---PEPKTRQKKSLPDIVVVLDPKEEEPITKPYT 223
BLAST of DY270350 vs. ExPASy Swiss-Prot
Match: RS3_DROME (40S ribosomal protein S3 OS=Drosophila melanogaster GN=RpS3 PE=1 SV=1) HSP 1 Score: 265.774 bits (678), Expect = 2.396e-76 Identity = 135/164 (82.32%), Postives = 145/164 (88.41%), Query Frame = 3 Query: 30 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 521 ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGAKGCEV+VSGKLR QRAKSMKF DG MI SG P N+Y+ Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYV 170 HSP 2 Score: 41.2022 bits (95), Expect = 2.396e-76 Identity = 23/55 (41.82%), Postives = 30/55 (54.55%), Query Frame = 1 Query: 526 SAVRHVLLRQGVLGIQVNILLGWDQKGQARANHTLCLIWVTIHPPEGKSVVVPTT 690 +A RHVLLRQGVLGI+V ++L +D K + L + P E K P T Sbjct: 172 TATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETPET 226
BLAST of DY270350 vs. ExPASy Swiss-Prot
Match: RS3_CAEEL (40S ribosomal protein S3 OS=Caenorhabditis elegans GN=rps-3 PE=1 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 6.919e-73 Identity = 129/164 (78.66%), Postives = 143/164 (87.20%), Query Frame = 3 Query: 30 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 521 ++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GRRI+ELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRRACYGVLRFIMESGA+G EVIVSGKLR QRAK+MKF DG MI SG PVN+YI Sbjct: 7 VTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGRRIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYI 170 HSP 2 Score: 40.4318 bits (93), Expect = 6.919e-73 Identity = 26/68 (38.24%), Postives = 36/68 (52.94%), Query Frame = 1 Query: 529 AVRHVLLRQGVLGIQVNILLGWDQKGQARANHTLCLIWVTIHPPEGKSVVVPTTGNPYCTFQSQIPAA 732 AVRHV LRQGV+GI+V I+L +D +GQ + L + P E P + + Q+PAA Sbjct: 173 AVRHVQLRQGVIGIKVKIMLPYDPRGQNGPRNALPDHVQIVEPQEEVLPKEPHSQHKEEKKDVQVPAA 240
BLAST of DY270350 vs. ExPASy Swiss-Prot
Match: RS3_YEAST (40S ribosomal protein S3 OS=Saccharomyces cerevisiae GN=RPS3 PE=1 SV=5) HSP 1 Score: 251.136 bits (640), Expect = 1.995e-69 Identity = 122/168 (72.62%), Postives = 147/168 (87.50%), Query Frame = 3 Query: 18 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 521 M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLGE GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA YGV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG++I SGQPVN++I Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFI 168 HSP 2 Score: 32.7278 bits (73), Expect = 1.995e-69 Identity = 14/20 (70.00%), Postives = 18/20 (90.00%), Query Frame = 1 Query: 526 SAVRHVLLRQGVLGIQVNIL 585 +A RHVL+RQGVLGI+V I+ Sbjct: 170 TATRHVLMRQGVLGIKVKIM 189
BLAST of DY270350 vs. ExPASy Swiss-Prot
Match: RS3_DICDI (40S ribosomal protein S3 OS=Dictyostelium discoideum GN=rps3 PE=2 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 4.016e-64 Identity = 117/171 (68.42%), Postives = 140/171 (81.87%), Query Frame = 3 Query: 27 QISKKRKFVADGVFFAELNEVLTRELAED-GYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYIPLSCK 536 QISKKRKFVADGVF AELNE+ TRE +D GYSGVE++ +P TEIIIRA++TQ V+G RRI+EL S+VQKRF F E +V L+AEK+ NRGLCA+AQAESL+ KLL GL VR+ACY ++ IM GAKGCEVIVSGKLRAQRAKSMKF+DGYMI SGQP ++I +C+ Sbjct: 6 QISKKRKFVADGVFHAELNELFTREFNKDEGYSGVELKTSPGLTEIIIRASKTQAVVGPNARRIQELCSLVQKRFNFKEGTVVLFAEKILNRGLCAVAQAESLKLKLLAGLPVRKACYAIVHQIMTRGAKGCEVIVSGKLRAQRAKSMKFRDGYMIKSGQPSKDFIDFACR 176 HSP 2 Score: 35.4242 bits (80), Expect = 4.016e-64 Identity = 19/37 (51.35%), Postives = 24/37 (64.86%), Query Frame = 1 Query: 529 AVRHVLLRQGVLGIQVNILLGWDQKGQARANHTLCLI 639 A RHVLLRQG LG++V I+L +D + R H C I Sbjct: 174 ACRHVLLRQGTLGVKVAIMLPYD---ETRKIHGACNI 207
BLAST of DY270350 vs. ExPASy Swiss-Prot
Match: RS3_ENCCU (40S ribosomal protein S3 OS=Encephalitozoon cuniculi GN=RPS3 PE=1 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.544e-34 Identity = 65/159 (40.88%), Postives = 103/159 (64.78%), Query Frame = 3 Query: 45 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVNEYI 521 +F+ +G+ AEL E + L +G+S +E+R+ +II++ + +GEK R+R+ + +R + P+ SVE+ EKV+ +GLCA+ QA +R K+LGG+ RRA L+ + A+GC++IVSGKL+ QRAKS+KF+DG +I SG V +YI Sbjct: 21 RFMKNGLMNAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQFQHLAAQRLEVPDESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHAKAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGDAVKDYI 179 HSP 2 Score: 31.187 bits (69), Expect = 2.544e-34 Identity = 16/40 (40.00%), Postives = 25/40 (62.50%), Query Frame = 1 Query: 511 MNTSHSAVRHVLLRQGVLGIQVNILLGWDQKGQARANHTL 630 +NT ++ V +QGV+GIQV I+L +D +G N+ L Sbjct: 179 INTGYATVE---TKQGVIGIQVRIMLPYDPEGVLGPNYPL 215 The following BLAST results are available for this feature:
BLAST of DY270350 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >DY270350 ID=DY270350; Name=DY270350; organism=Citrus clementina; type=EST; length=1259bpback to top |