DY270353
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY270353 vs. ExPASy Swiss-Prot
Match: KCNH5_HUMAN (Potassium voltage-gated channel subfamily H member 5 OS=Homo sapiens GN=KCNH5 PE=1 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 1.226e-11 Identity = 39/180 (21.67%), Postives = 91/180 (50.56%), Query Frame = 3 Query: 132 YISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYMCLRFK-AESLNQHQLIEQLPKSICKSICQHLFLHTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMI 668 Y+S++Y+++T++TT+G+G++ VE +F + M+ L A + GN+T + + T + + +F+ ++P L ++++ Y+ + ++ ++ +++ PK + IC HL + F+ S + L + + + P + + E+ D + +VSG +E+I Sbjct: 419 YVSSLYFTMTSLTTIGFGNIAPTTDVEKMFSVAMMMVGSLLYATIFGNVTTIFQQMYANTNRYHEMLNNVRDFLKLYQVPKGLSERVMDYIVSTWSMSKGIDTEKVLSICPKDMRADICVHLNRKVFNEHPAFRLASDGCLRALAVEFQTIHCAPGDLIYHAGESVDALCFVVSGSLEVI 598
BLAST of DY270353 vs. ExPASy Swiss-Prot
Match: KCNH2_CHICK (Potassium voltage-gated channel subfamily H member 2 (Fragment) OS=Gallus gallus GN=KCNH2 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.226e-11 Identity = 45/232 (19.40%), Postives = 104/232 (44.83%), Query Frame = 3 Query: 15 LVHCAGCLYYLLAD---RYPHKGETWLGSVNPNFTET----------SLWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYMCLRFK-AESLNQHQLIEQLPKSICKSICQHLFLHTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMI 668 + H C++Y + + Y WL ++ + S+ +Y++A+Y++ +++T+VG+G++ E IF I ML + A + GN++ ++ T + + F+ +++P L++++ Y + ++ + +++ P + IC HL ++ F+ SK + L K K + PP + ++ + +Y I G +E++ Sbjct: 263 IAHWLACIWYAIGNVERPYMEHKIGWLDNLGDQIGKRYNDSDLSSGPSIKDKYVTALYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVKEFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPDCLQADICLHLNRTLLQNCKAFRGASKGCLRALAMKFKTTHAPPGDTLVHYGDVLTTLYFISRGSIEIL 494
BLAST of DY270353 vs. ExPASy Swiss-Prot
Match: CNGC7_ARATH (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana GN=CNGC7 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.226e-11 Identity = 39/188 (20.74%), Postives = 94/188 (50.00%), Query Frame = 3 Query: 108 TETSLWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYMCLRF-KAESLNQHQLIEQLPKSICKSICQHLFLHTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMI 668 + T+ + ++ ++W + ++T+G G + E++F I + L L A LIGNM + T R E R + ++ LP L++++ Y ++ + +++ +++ LPK + + I +HL L+ V +V LF ++ + ++ + ++K ++ + + +++ I+ G +E + Sbjct: 363 SSTTFFSKFCYCLWWGLQNLSTLGQGLQTSTFPGEVLFSIAIAIAGLLLFALLIGNMQTYLQSLTVRLEEMRIKRRDSEQWMHHRSLPQNLRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGRLESV 550
BLAST of DY270353 vs. ExPASy Swiss-Prot
Match: KCNH2_RABIT (Potassium voltage-gated channel subfamily H member 2 OS=Oryctolagus cuniculus GN=KCNH2 PE=2 SV=3) HSP 1 Score: 70.8626 bits (172), Expect = 1.601e-11 Identity = 44/231 (19.05%), Postives = 106/231 (45.89%), Query Frame = 3 Query: 15 LVHCAGCLYYLLAD-RYPHKGET--WLGSVNPNFTET---------SLWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYMCLRFK-AESLNQHQLIEQLPKSICKSICQHLFLHTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMI 668 + H C++Y + + PH WL ++ + S+ +Y++ +Y++ +++T+VG+G++ E IF I ML + A + GN++ ++ T + + F+ +++P L++++ Y + ++ + +++ P+ + IC HL ++ F+ +K+ + L K K + PP + ++ + +Y I G +E++ Sbjct: 562 IAHWLACIWYAIGNMEQPHMDSRIGWLHNLGDQMGKPYNSSGLGGPSIKDKYVTGLYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVREFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLNRSLLQHCKPFRGATKDCLRALAMKFKTTHAPPGDTLVHAGDLLTALYFISRGSIEIL 792
BLAST of DY270353 vs. ExPASy Swiss-Prot
Match: KCNH2_HUMAN (Potassium voltage-gated channel subfamily H member 2 OS=Homo sapiens GN=KCNH2 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.601e-11 Identity = 45/231 (19.48%), Postives = 106/231 (45.89%), Query Frame = 3 Query: 15 LVHCAGCLYYLLAD-RYPHKGET--WLGSVNPNFTET---------SLWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYMCLRFK-AESLNQHQLIEQLPKSICKSICQHLFLHTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMI 668 + H C++Y + + PH WL ++ + S+ +Y++A+Y++ +++T+VG+G++ E IF I ML + A + GN++ ++ T + + F+ +++P L++++ Y + ++ + +++ P+ + IC HL ++ F+ +K + L K K + PP + ++ + +Y I G +E++ Sbjct: 560 IAHWLACIWYAIGNMEQPHMDSRIGWLHNLGDQIGKPYNSSGLGGPSIKDKYVTALYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVREFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLNRSLLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTLVHAGDLLTALYFISRGSIEIL 790
BLAST of DY270353 vs. ExPASy Swiss-Prot
Match: KCNH2_CANFA (Potassium voltage-gated channel subfamily H member 2 OS=Canis familiaris GN=KCNH2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.601e-11 Identity = 45/231 (19.48%), Postives = 106/231 (45.89%), Query Frame = 3 Query: 15 LVHCAGCLYYLLAD-RYPHKGET--WLGSVNPNFTET---------SLWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYMCLRFK-AESLNQHQLIEQLPKSICKSICQHLFLHTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMI 668 + H C++Y + + PH WL ++ + S+ +Y++A+Y++ +++T+VG+G++ E IF I ML + A + GN++ ++ T + + F+ +++P L++++ Y + ++ + +++ P+ + IC HL ++ F+ +K + L K K + PP + ++ + +Y I G +E++ Sbjct: 559 IAHWLACIWYAIGNMEQPHMDSRIGWLHNLGDQIGKPYNSSGLGGPSIKDKYVTALYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVREFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLNRSLLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTLVHAGDLLTALYFISRGSIEIL 789
BLAST of DY270353 vs. ExPASy Swiss-Prot
Match: CNGC8_ARATH (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana GN=CNGC8 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.601e-11 Identity = 39/188 (20.74%), Postives = 94/188 (50.00%), Query Frame = 3 Query: 108 TETSLWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYMCLRF-KAESLNQHQLIEQLPKSICKSICQHLFLHTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMI 668 + T+ + ++ ++W + ++T+G G + E++F I + L L A LIGNM + T R E R + ++ LP L++++ Y ++ + +++ +++ LPK + + I +HL L+ V +V LF ++ + ++ + ++K ++ + + +++ I+ G +E + Sbjct: 369 SSTTFFSKFCYCLWWGLQNLSTLGQGLQTSTYPGEVLFSIAIAVAGLLLFALLIGNMQTYLQSLTVRLEEMRIKRRDSEQWMHHRSLPQNLRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRLESV 556
BLAST of DY270353 vs. ExPASy Swiss-Prot
Match: KCNH2_RAT (Potassium voltage-gated channel subfamily H member 2 OS=Rattus norvegicus GN=Kcnh2 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.091e-11 Identity = 45/231 (19.48%), Postives = 106/231 (45.89%), Query Frame = 3 Query: 15 LVHCAGCLYYLLAD-RYPHKGET--WLGSVNPNFTET---------SLWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYMCLRFK-AESLNQHQLIEQLPKSICKSICQHLFLHTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMI 668 + H C++Y + + PH WL ++ + S+ +Y++A+Y++ +++T+VG+G++ E IF I ML + A + GN++ ++ T + + F+ +++P L++++ Y + ++ + +++ P+ + IC HL ++ F+ +K + L K K + PP + ++ + +Y I G +E++ Sbjct: 562 IAHWLACIWYAIGNMEQPHMDSHIGWLHNLGDQIGKPYNSSGLGGPSIKDKYVTALYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVREFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLNRSLLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTLVHAGDLLTALYFISRGSIEIL 792
BLAST of DY270353 vs. ExPASy Swiss-Prot
Match: KCNH2_MOUSE (Potassium voltage-gated channel subfamily H member 2 OS=Mus musculus GN=Kcnh2 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 2.091e-11 Identity = 45/231 (19.48%), Postives = 106/231 (45.89%), Query Frame = 3 Query: 15 LVHCAGCLYYLLAD-RYPHKGET--WLGSVNPNFTET---------SLWIRYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYMCLRFK-AESLNQHQLIEQLPKSICKSICQHLFLHTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEVEMI 668 + H C++Y + + PH WL ++ + S+ +Y++A+Y++ +++T+VG+G++ E IF I ML + A + GN++ ++ T + + F+ +++P L++++ Y + ++ + +++ P+ + IC HL ++ F+ +K + L K K + PP + ++ + +Y I G +E++ Sbjct: 562 IAHWLACIWYAIGNMEQPHMDSHIGWLHNLGDQIGKPYNSSGLGGPSIKDKYVTALYFTFSSLTSVGFGNVSPNTNSEKIFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVREFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLNRSLLQHCKPFRGATKGCLRALAMKFKTTHAPPGDTLVHAGDLLTALYFISRGSIEIL 792
BLAST of DY270353 vs. ExPASy Swiss-Prot
Match: CNGC3_ARATH (Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana GN=CNGC3 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 2.091e-11 Identity = 44/178 (24.72%), Postives = 84/178 (47.19%), Query Frame = 3 Query: 129 RYISAMYWSITTMTTVGYGDLHAVNTVEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVGRNRLPPRLKKQILAYMCLRFK-AESLNQHQLIEQLPKSICKSICQHLFLHTVEKVYLFKDVSKEIIVLLVAKMKAEYIPPREDVIMQNEAPDDVYIIVSGEV 659 ++ +W + ++ +G + E+IF I + L L A LIGNM + T R E R A ++ LP L+K+I Y +++ + + + L+ LPK + K I +HL L ++KV F+ + ++ L A++K + ++ + E +D+ I+ G + Sbjct: 345 KFFYCFWWGLRNLSALGQNLKTSAFEGEIIFAIVICISGLVLFALLIGNMQKYLQSTTVRVEEMRVKRRDAEQWMSHRMLPDDLRKRIRKYEQYKWQETKGVEEEALLSSLPKDLRKDIKRHLCLKLLKKVPWFQAMDDRLLDALCARLKTVLYTEKSYIVREGEPVEDMLFIMRGNL 522 The following BLAST results are available for this feature:
BLAST of DY270353 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY270353 ID=DY270353; Name=DY270353; organism=Citrus clementina; type=EST; length=1133bpback to top |