DY270365

Overview
NameDY270365
Unique NameDY270365
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1361
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY270365 vs. ExPASy Swiss-Prot
Match: GLGA_ENT38 (Glycogen synthase OS=Enterobacter sp. (strain 638) GN=glgA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.820e-11
Identity = 44/143 (30.77%), Postives = 77/143 (53.85%), Query Frame = 3 
Query:    3 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTG----IKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 419
            +HN+AYQG +       ++LP      + F + +     G+ I+++KAG+  +D +  VSP YA+E+   E  G  ++ ++R+      + GI+NG+D + WNP TD  +  ++   +V D K   K  LQ  +GL V+  +P
Sbjct:  160 VHNLAYQGMYYAHHMNEIDLP------WSFYNMHGLEFNGQ-ISFLKAGLYYADHITAVSPTYAREITEPEF-GYGMEGLLRQRQREGRLTGILNGVDEKIWNPETDLLLASRFSRDSVED-KAENKRQLQVAMGLKVNDKVP 293
[Close]
BLAST of DY270365 vs. ExPASy Swiss-Prot
Match: GLGA_ECOSM (Glycogen synthase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=glgA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.820e-11
Identity = 46/142 (32.39%), Postives = 75/142 (52.82%), Query Frame = 3 
Query:    3 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 419
            +HN+AYQG F       + LP      + F + +     G+ I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P
Sbjct:  160 VHNLAYQGMFYAHHMNDIQLP------WSFFNIHGLEFNGQ-ISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVP 293
[Close]
BLAST of DY270365 vs. ExPASy Swiss-Prot
Match: GLGA_ECOSE (Glycogen synthase OS=Escherichia coli (strain SE11) GN=glgA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.820e-11
Identity = 46/142 (32.39%), Postives = 75/142 (52.82%), Query Frame = 3 
Query:    3 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 419
            +HN+AYQG F       + LP      + F + +     G+ I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P
Sbjct:  160 VHNLAYQGMFYAHHMNDIQLP------WSFFNIHGLEFNGQ-ISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVP 293
[Close]
BLAST of DY270365 vs. ExPASy Swiss-Prot
Match: GLGA_ECOLU (Glycogen synthase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=glgA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.820e-11
Identity = 46/142 (32.39%), Postives = 75/142 (52.82%), Query Frame = 3 
Query:    3 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 419
            +HN+AYQG F       + LP      + F + +     G+ I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P
Sbjct:  160 VHNLAYQGMFYAHHMNDIQLP------WSFFNIHGLEFNGQ-ISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVP 293
[Close]
BLAST of DY270365 vs. ExPASy Swiss-Prot
Match: GLGA_ECOLI (Glycogen synthase OS=Escherichia coli (strain K12) GN=glgA PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.820e-11
Identity = 46/142 (32.39%), Postives = 75/142 (52.82%), Query Frame = 3 
Query:    3 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 419
            +HN+AYQG F       + LP      + F + +     G+ I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P
Sbjct:  160 VHNLAYQGMFYAHHMNDIQLP------WSFFNIHGLEFNGQ-ISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVP 293
[Close]
BLAST of DY270365 vs. ExPASy Swiss-Prot
Match: GLGA_ECOLC (Glycogen synthase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=glgA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.820e-11
Identity = 46/142 (32.39%), Postives = 75/142 (52.82%), Query Frame = 3 
Query:    3 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 419
            +HN+AYQG F       + LP      + F + +     G+ I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P
Sbjct:  160 VHNLAYQGMFYAHHMNDIQLP------WSFFNIHGLEFNGQ-ISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVP 293
[Close]
BLAST of DY270365 vs. ExPASy Swiss-Prot
Match: GLGA_ECOL6 (Glycogen synthase OS=Escherichia coli O6 GN=glgA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.820e-11
Identity = 46/142 (32.39%), Postives = 75/142 (52.82%), Query Frame = 3 
Query:    3 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 419
            +HN+AYQG F       + LP      + F + +     G+ I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P
Sbjct:  160 VHNLAYQGMFYAHHMNDIQLP------WSFFNIHGLEFNGQ-ISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVP 293
[Close]
BLAST of DY270365 vs. ExPASy Swiss-Prot
Match: GLGA_ECOL5 (Glycogen synthase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=glgA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.820e-11
Identity = 46/142 (32.39%), Postives = 75/142 (52.82%), Query Frame = 3 
Query:    3 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 419
            +HN+AYQG F       + LP      + F + +     G+ I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P
Sbjct:  160 VHNLAYQGMFYAHHMNDIQLP------WSFFNIHGLEFNGQ-ISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVP 293
[Close]
BLAST of DY270365 vs. ExPASy Swiss-Prot
Match: GLGA_ECOK1 (Glycogen synthase OS=Escherichia coli O1:K1 / APEC GN=glgA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.820e-11
Identity = 46/142 (32.39%), Postives = 75/142 (52.82%), Query Frame = 3 
Query:    3 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 419
            +HN+AYQG F       + LP      + F + +     G+ I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P
Sbjct:  160 VHNLAYQGMFYAHHMNDIQLP------WSFFNIHGLEFNGQ-ISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVP 293
[Close]
BLAST of DY270365 vs. ExPASy Swiss-Prot
Match: GLGA_ECOHS (Glycogen synthase OS=Escherichia coli O9:H4 (strain HS) GN=glgA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.820e-11
Identity = 46/142 (32.39%), Postives = 75/142 (52.82%), Query Frame = 3 
Query:    3 IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDK-GVE--LDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 419
            +HN+AYQG F       + LP      + F + +     G+ I+++KAG+  +D +  VSP YA+E+   +   G+E  L    R+  + G++NG+D + W+P TD  +  +Y   T+ D K   K  LQ  +GL VD  +P
Sbjct:  160 VHNLAYQGMFYAHHMNDIQLP------WSFFNIHGLEFNGQ-ISFLKAGLYYADHITAVSPTYAREITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLED-KAENKRQLQIAMGLKVDDKVP 293
The following BLAST results are available for this feature:
BLAST of DY270365 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
GLGA_ENT387.820e-1130.77Glycogen synthase OS=Enterobacter sp. (strain 638)... [more]
GLGA_ECOSM7.820e-1132.39Glycogen synthase OS=Escherichia coli (strain SMS-... [more]
GLGA_ECOSE7.820e-1132.39Glycogen synthase OS=Escherichia coli (strain SE11... [more]
GLGA_ECOLU7.820e-1132.39Glycogen synthase OS=Escherichia coli O17:K52:H18 ... [more]
GLGA_ECOLI7.820e-1132.39Glycogen synthase OS=Escherichia coli (strain K12)... [more]
GLGA_ECOLC7.820e-1132.39Glycogen synthase OS=Escherichia coli (strain ATCC... [more]
GLGA_ECOL67.820e-1132.39Glycogen synthase OS=Escherichia coli O6 GN=glgA P... [more]
GLGA_ECOL57.820e-1132.39Glycogen synthase OS=Escherichia coli O6:K15:H31 (... [more]
GLGA_ECOK17.820e-1132.39Glycogen synthase OS=Escherichia coli O1:K1 / APEC... [more]
GLGA_ECOHS7.820e-1132.39Glycogen synthase OS=Escherichia coli O9:H4 (strai... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YG08FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270365 ID=DY270365; Name=DY270365; organism=Citrus clementina; type=EST; length=1361bp
GTATCCACAATATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGA
CTTCTCAACCTTCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGG
ATACAATAAACCTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAA
TATTAGAATCAGACATGGTCTTAACTGTGAGCCCACACTATGCCCAAGAA
CTTGTTTCTGGTGAAGACAAAGGAGTAGAATTGGATAACATCATCCGTAA
AACTGGCATTAAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACC
CCTTGACTGACAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATG
GATGCGAAGCCTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCC
TGTCGATAGAAATATTCCCTGTCATATGCTTCATTGGTAGACTTGAAGAG
CAGAAAGGCCTACATACTCTTGCCACTGCCAATCCCCATTATCATCAAAA
AAAAGTTCCCATAATACTACCCTTGCTCCTGGCAAACCAACCAATCGCAG
AACCCCCTAGAACAGTCGGAAGACACTGTACCACCTAGACACCACACAGA
CCTAACCGCGTTCCATAATCCCCACCGCCCATACAAATACATGACACTAC
CGAGTTTACATCTACGTAAGATCACAAACTGACGTTCCCAGTGACATTTT
ACCCCCCTCCCAACCGCACCACCTCCTTCTCCCTCCTCCTCCCTCCAGCC
CGCCGAACAAAAACACCACAAGAAAAACAATCACACCCAACCGAGTCCAC
TCCGCTCCCACCTCACGTACACCTCGCAGAGCACATTCAAACAGTCTCAC
CTATCCGACCTAACCCCTCTAACCCACACTCTACGACCGCCTCTTCCCAT
ACCTCAACACACTACACACCACATGCAGACAACATCTAAACCATATACTC
CCAATACTCGGCCATATAAAAATCTGTCAGACCAACACCACGCCCCCCCC
ATCTACCCCTCCCCCGCCCCACCCTCCCCGCCGACTCCCCTCCCCCTGCC
ATATATCCCCTCTAAAACTTCTAATAATACAACCTACCGTGACCCACTAC
GTCACCCCTACCATTACTGACCCTTTGCCTTCCATATTCATTACAACACT
ACGCCCACTGAACCATTACCCCCGACGCACCTTCCCACACCTCTCCCTTT
TTCACCACACTACATTTTCACCACATATTACCCTACATAATAATCGCACA
GCTCCACTTAACACTAATCCCATTCTTTTTCGCACACTACTCTACTCCCC
CCACAACTACATCAGATTACGCCATCTAACACTTATCAATCCTAAACCAC
TACATCCCACC
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