DY270367
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY270367 vs. ExPASy Swiss-Prot
Match: STAD_SPIOL (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.577e-39 Identity = 85/183 (46.45%), Postives = 110/183 (60.11%), Query Frame = 3 Query: 6 SVPFERRTLPVLS---ATTMQASQFLVTSTKPPAACSPLVPNPAHHRLTAASSTVRFRQISAVAAPPKPK----THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQYFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITDNAIPTYQTMINTLDGVRDETGASSRPRAIW 533 S PF+ R LP S + ++ +F + ST ++SS + +PP+ THSMP EK+E+FKSLE WA N+L LKPVEKCWQPQ +LPDP DF DQV+ ++ER +PDD +VVLVGDMIT+ A+PTYQTM+NTLDG +DETGAS A+W Sbjct: 9 STPFQCRRLPSFSPRQTPSRRSPKFFMAST------------------LSSSSPKEAESLKKPFSPPREVHVQVTHSMPQEKIEIFKSLEGWAEENLLVHLKPVEKCWQPQDYLPDPAS--EDFRDQVKEIQERAKEIPDDLYVVLVGDMITEEALPTYQTMLNTLDGAKDETGASPTSWAVW 171 HSP 2 Score: 29.6462 bits (65), Expect = 2.577e-39 Identity = 15/31 (48.39%), Postives = 20/31 (64.52%), Query Frame = 1 Query: 538 RARTDEENRHGDLPLTFMNIPCQIHMIYIEK 630 RA T EENRHGDL ++ + ++ M IEK Sbjct: 173 RAWTAEENRHGDLLNKYLYLSGRVDMRSIEK 203
BLAST of DY270367 vs. ExPASy Swiss-Prot
Match: STAD_HELAN (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Helianthus annuus PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 3.358e-39 Identity = 76/135 (56.30%), Postives = 91/135 (67.41%), Query Frame = 3 Query: 141 TAASSTVRFRQISAVAAPPKPK----THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQYFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITDNAIPTYQTMINTLDGVRDETGASSRPRAIW 533 T S+T + PP+ HSMPP+K+E+FKS+E WA NN+L LKPVEKCWQ Q FLPDP F +QV LR R +PDDYFVVLVGDMIT+ A+PTYQTM+NTLDGVRDETGA+ +W Sbjct: 36 TIGSATTKVESTKKPFTPPREVHQQVLHSMPPQKIEIFKSMEGWAENNILVHLKPVEKCWQAQDFLPDPAS--DGFMEQVEELRARAKEIPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGATLLLGLVW 168 HSP 2 Score: 31.5722 bits (70), Expect = 3.358e-39 Identity = 16/36 (44.44%), Postives = 22/36 (61.11%), Query Frame = 1 Query: 523 GLFGNRARTDEENRHGDLPLTFMNIPCQIHMIYIEK 630 GL RA T EENRHGDL ++ + ++ M I+K Sbjct: 165 GLVWTRAWTAEENRHGDLLHQYLYLSGRVDMRQIQK 200
BLAST of DY270367 vs. ExPASy Swiss-Prot
Match: STAD_ORYSJ (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os04g0379900 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 3.359e-39 Identity = 80/162 (49.38%), Postives = 105/162 (64.81%), Query Frame = 3 Query: 69 FLVTSTKPPAACSPLVPNPAH--HRLTAASSTV-RFRQISAVAAPPKPK----THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQYFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITDNAIPTYQTMINTLDGVRDETGASSRPRAIW 533 F + T P +C + ++ ++ A +ST+ R + PP+ HS+PP+K E+F SL+ WA N+L LLKPVEK WQPQ FLPDP+ F D+V+ LRER +PDDYFV LVGDM+T+ A+PTYQTM+NTLDGVRDETGAS A+W Sbjct: 3 FAASHTASPYSCGGVAQRRSNGMSKMVAMASTINRVKTAKKPYTPPREVHLQVKHSLPPQKREIFDSLQPWAKENLLNLLKPVEKSWQPQDFLPDPSS--DGFYDEVKELRERAKEIPDDYFVCLVGDMVTEEALPTYQTMLNTLDGVRDETGASPTTWAVW 162 HSP 2 Score: 31.187 bits (69), Expect = 3.359e-39 Identity = 16/31 (51.61%), Postives = 20/31 (64.52%), Query Frame = 1 Query: 538 RARTDEENRHGDLPLTFMNIPCQIHMIYIEK 630 RA T EENRHGDL +M + ++ M IEK Sbjct: 164 RAWTAEENRHGDLLNKYMYLTGRVDMKQIEK 194
BLAST of DY270367 vs. ExPASy Swiss-Prot
Match: STADS_BRANA (Acyl-[acyl-carrier-protein] desaturase, seed specific, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.426e-39 Identity = 84/162 (51.85%), Postives = 106/162 (65.43%), Query Frame = 3 Query: 72 LVTSTKPPAACSPLVPNPAHHRLTAASS-TVRFRQISAVAAPPKPKT-------HSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQYFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITDNAIPTYQTMINTLDGVRDETGASSRPRAIW 533 L +S +PP + +P L ++SS + +++ ++ P P HSMPP+K+E+FKS+E A N+LP LK VEK WQPQ FLPDP F DQV+ LRER LPDDYFVVLVGDMIT+ A+PTYQTM+NTLDGVRDETGAS A+W Sbjct: 15 LASSARPPVST---FRSPKFLCLASSSSPALSSKEVESLKKPFTPPREVHLQVLHSMPPQKIEIFKSMEDRAEQNLLPHLKDVEKSWQPQDFLPDPAS--DGFEDQVKELRERARELPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASPTSWAVW 171 HSP 2 Score: 30.0314 bits (66), Expect = 7.426e-39 Identity = 15/31 (48.39%), Postives = 20/31 (64.52%), Query Frame = 1 Query: 538 RARTDEENRHGDLPLTFMNIPCQIHMIYIEK 630 RA T EENRHGDL ++ + ++ M IEK Sbjct: 173 RAWTAEENRHGDLLNKYLYLSGRVDMRQIEK 203
BLAST of DY270367 vs. ExPASy Swiss-Prot
Match: STAD_OLEEU (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Olea europaea PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 8.677e-37 Identity = 74/135 (54.81%), Postives = 90/135 (66.67%), Query Frame = 3 Query: 141 TAASSTVRFRQISAVAAPPKPK----THSMPPEKVEVFKSLETWATNNVLPLLKPVEKCWQPQYFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITDNAIPTYQTMINTLDGVRDETGASSRPRAIW 533 T S ++ ++ PP+ THS+ PEK E+F SL WA N+L LLK V+KCWQP FLPD F +QV LR+R +PDDYF+VLVGDMIT+ A+PTYQTM+NTLDGVRDETGAS P AIW Sbjct: 30 TIHSPSMEVGKVKKPFTPPREVHVQVTHSLAPEKREIFNSLNNWAQENILVLLKDVDKCWQPSDFLPDSAS--EGFDEQVMELRKRCKEIPDDYFIVLVGDMITEEALPTYQTMLNTLDGVRDETGASLTPWAIW 162 HSP 2 Score: 30.0314 bits (66), Expect = 8.677e-37 Identity = 15/31 (48.39%), Postives = 20/31 (64.52%), Query Frame = 1 Query: 538 RARTDEENRHGDLPLTFMNIPCQIHMIYIEK 630 RA T EENRHGDL ++ + ++ M IEK Sbjct: 164 RAWTAEENRHGDLLNKYLYLSGRVDMKQIEK 194
BLAST of DY270367 vs. ExPASy Swiss-Prot
Match: STAD_LINUS (Acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Linum usitatissimum PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.267e-31 Identity = 68/106 (64.15%), Postives = 76/106 (71.70%), Query Frame = 3 Query: 219 PPEKVEVFKSLETWATNNVL-PLLKPVEKCWQPQYFLPDPTLPFSDFTDQVRALRERTAGLPDDYFVVLVGDMITDNAIPTYQTMINTLDGVRDETGASSRPRAIW 533 P E+FKSL +VL LKPVEKCWQPQ FLP+P F +QV+ LR R LPDDYFVVLVGDMIT+ A+PTYQTM+NTLDGVRDETGAS P AIW Sbjct: 65 PTGSWEIFKSLGRLGLRDVLISHLKPVEKCWQPQDFLPEPES--DGFEEQVKELRARAKELPDDYFVVLVGDMITEEALPTYQTMLNTLDGVRDETGASLTPWAIW 168 HSP 2 Score: 30.0314 bits (66), Expect = 1.267e-31 Identity = 15/31 (48.39%), Postives = 20/31 (64.52%), Query Frame = 1 Query: 538 RARTDEENRHGDLPLTFMNIPCQIHMIYIEK 630 RA T EENRHGDL ++ + ++ M IEK Sbjct: 170 RAWTAEENRHGDLLNKYLYLSGRVDMRQIEK 200
BLAST of DY270367 vs. ExPASy Swiss-Prot
Match: STAD_CORSA (Omega-12 acyl-[acyl-carrier-protein] desaturase, chloroplastic OS=Coriandrum sativum PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.468e-29 Identity = 60/105 (57.14%), Postives = 75/105 (71.43%), Query Frame = 3 Query: 222 PEKVEVFKSLETWATNNVLPLLKPVEKCWQPQYFLPDPTLPFSD-FTDQVRALRERTAGLPDDYFVVLVGDMITDNAIPTYQTMINTLDGVRDETGASSRPRAIW 533 PE E+F SLE WA +N+L LK VE WQPQ +LPDPT SD F DQV+ +RER +PD+YFVVLVGDMIT+ A+PTY +M+N DG++D+TGA A W Sbjct: 55 PEVDELFNSLEGWARDNILVHLKSVENSWQPQDYLPDPT---SDAFEDQVKEMRERAKDIPDEYFVVLVGDMITEEALPTYMSMLNRCDGIKDDTGAQPTSWATW 156 HSP 2 Score: 30.0314 bits (66), Expect = 1.468e-29 Identity = 15/31 (48.39%), Postives = 20/31 (64.52%), Query Frame = 1 Query: 538 RARTDEENRHGDLPLTFMNIPCQIHMIYIEK 630 RA T EENRHGDL ++ + ++ M IEK Sbjct: 158 RAWTAEENRHGDLLNKYLYLSGRVDMRMIEK 188 The following BLAST results are available for this feature:
BLAST of DY270367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >DY270367 ID=DY270367; Name=DY270367; organism=Citrus clementina; type=EST; length=1314bpback to top |