DY270368
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_SULTO (30S ribosomal protein S7P OS=Sulfolobus tokodaii GN=rps7p PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 1.717e-33 Identity = 77/153 (50.33%), Postives = 104/153 (67.97%), Query Frame = 2 Query: 125 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIK 583 D+K+F +W + V++ D SL YIG+ Y+PHT GR+ +RF KA+ PIVERL N++M GRN GKK++A IVK A +II L T QNPIQV+V A+ NS PRE+ TRI G+V AVD++P RRV+ A+ L GA+E++F N K Sbjct: 10 DLKVFGKWDTK-VEIRDPSLKKYIGLMPV----YLPHTGGRHEHRRFGKAKLPIVERLINNVMRPGRNKGKKMLAYNIVKTAFDIIALKTGQNPIQVLVKAIENSAPREEVTRIMYGGIVYYVAVDVAPQRRVDLALRHLVMGAKEASFNNPK 157
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_SULSO (30S ribosomal protein S7P OS=Sulfolobus solfataricus GN=rps7p PE=3 SV=3) HSP 1 Score: 143.28 bits (360), Expect = 2.929e-33 Identity = 77/160 (48.12%), Postives = 106/160 (66.25%), Query Frame = 2 Query: 125 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLA 604 D+K+F +W + V++ D SL YI + Y+PHT GR+ +RF KA+ PIVERL N +M GRN GKK +A IVK A +II+L T QNPIQV+V A+ NS PRE+ TRI G+V AVD+SP RR++ A+ + TGA++++F N K +LA Sbjct: 9 DIKVFGKWDTK-VEIRDPSLKKYISLMPV----YLPHTGGRHEHRRFGKAKVPIVERLINQIMRPGRNKGKKHLAYNIVKLAFDIIYLKTGQNPIQVLVRAIENSAPREEVTRIMYGGIVYYVAVDVSPQRRIDLALRHIATGAKDASFNNPKPIEEVLA 163
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_METJA (30S ribosomal protein S7P OS=Methanocaldococcus jannaschii GN=rps7p PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 3.826e-33 Identity = 75/153 (49.02%), Postives = 103/153 (67.32%), Query Frame = 2 Query: 125 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIK 583 ++K+F RW+ +DV V D L +YI + YVPHTAGRY+ ++F KA+ IVERL N +M N GKKL A++IV++A EII T QNPIQV+VDA+ N+GPRED TRI G+V Q+VD S LRR++ A+ + GA +A ++ K Sbjct: 5 EIKVFGRWSTKDVVVKDPGLRNYINLTPI----YVPHTAGRYTKRQFEKAKMNIVERLVNKVMRREENTGKKLKALKIVENAFEIIEKRTKQNPIQVLVDAIENAGPREDTTRISYGGIVYLQSVDCSSLRRIDVALRNIALGAYMAAHKSKK 153
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_SULAC (30S ribosomal protein S7P OS=Sulfolobus acidocaldarius GN=rps7p PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 9.424e-32 Identity = 75/153 (49.02%), Postives = 103/153 (67.32%), Query Frame = 2 Query: 125 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIK 583 +VK+F +W + V+V D SL YI + + Y+PHT GR+ +RF K++ PIVERL N+LM GRN GKK++A IVK +II + T QNPIQV+V A+ N+ PRE+ TRI G+V AVD++P RRV+ A+ L TGA E++F N K Sbjct: 11 NVKVFGKWDTK-VEVRDPSLKKYIDLMSI----YLPHTGGRHEHRRFGKSRIPIVERLINNLMRPGRNKGKKMLAYNIVKTTFDIIAVKTGQNPIQVLVRAIENAAPREEVTRIMYGGIVYYVAVDVAPQRRVDLALRHLVTGASEASFNNPK 158
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_CALMQ (30S ribosomal protein S7P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps7p PE=3 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 1.663e-31 Identity = 63/150 (42.00%), Postives = 92/150 (61.33%), Query Frame = 2 Query: 128 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRN 577 + LF +W DV + D L Y+ ++ +PHT G+Y ++F KA PI+ER+ N LM GRN GKK A +I+K A +II++ T +NP+QV VDAV+N PRE+ TR+ G+ +VD+ P RR++ AI + GAR +F N Sbjct: 40 ILLFGKWNVNDVVIRDPGLRRYMCLKPM----LLPHTEGKYQNRKFGKAMIPIIERMMNQLMKPGRNAGKKQKAYKILKTAFDIIYVATGKNPVQVFVDAVVNVAPREEITRVIYGGIAYPVSVDVGPTRRLDLAIRWIAEGARACSFNN 185 HSP 2 Score: 33.4982 bits (75), Expect = 1.663e-31 Identity = 15/34 (44.12%), Postives = 22/34 (64.71%), Query Frame = 3 Query: 570 FVTSRTIAECLPDELINAAKGSSNSYAIQKKDEI 671 F R I ECL +E+I AA SYA++++DE+ Sbjct: 183 FNNPRPIEECLANEIIAAANNDPASYALRRRDEM 216
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_HALSA (30S ribosomal protein S7P OS=Halobacterium salinarium GN=rps7p PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 3.959e-30 Identity = 71/171 (41.52%), Postives = 103/171 (60.23%), Query Frame = 2 Query: 92 AQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLA 604 A+S+D + + KLF +W ++ D S Y+ V T V HT GR++ K+F+K++ IVERL N LM G N GKK A++IV+ A +I+H TD+NPIQV+V AV N+ PRE+ R+ G+ QAVD +P RRV+QA+ L GA ++F+ + LA Sbjct: 16 AESEDTQEVAANAKLFGKWDVAEIHYEDPSTRRYLAV------TPVAHTMGRHAQKQFKKSEISIVERLANRLMKTGANAGKKQQALKIVRDAFDIVHERTDENPIQVLVSAVENAAPREETVRLKYGGISVPQAVDTAPQRRVDQALKFLADGAHSASFKTPTDAAEALA 180
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_META3 (30S ribosomal protein S7P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps7p PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.505e-29 Identity = 68/160 (42.50%), Postives = 103/160 (64.38%), Query Frame = 2 Query: 125 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLA 604 ++KLFN+W ++ V D SL YI ++ +VPHT+GR S + F KA+ IVERL N+LM +N G+K + + IV+ A EII T++NP++V+V+A+ N GPRE+ TRI G+ Q+VD+SP RR++ A+ + G SA +N K+ + LA Sbjct: 2 EIKLFNKWDTTEIVVKDPSLRHYINLEPI----FVPHTSGRNSGRMFEKAKMNIVERLVNNLMRAEQNTGQKQVTLSIVEEAFEIIEKRTNENPVKVLVEALENGGPREETTRISYGGIAFLQSVDVSPSRRLDTALRNIAIGTLNSAHKNKKSAAQCLA 157
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_KORCO (30S ribosomal protein S7P OS=Korarchaeum cryptofilum (strain OPF8) GN=rps7p PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.505e-29 Identity = 75/177 (42.37%), Postives = 105/177 (59.32%), Query Frame = 2 Query: 110 SQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLM------------MHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLA 604 S P +KLF RW+++D+++ + +L + I ++ Y+PHT GR+ K+F K + PIVERL N LM ++ +N GKKL A+R VK+A EII L T +NPIQV +DA+ NS RE+ TRI GV AVD SP R V+ AI + GA AFR+ ++ LA Sbjct: 5 SNPETQIKLFGRWSYDDLRIENAALKNVISLKPV----YLPHTGGRHEHKKFGKLEIPIVERLVNRLMGQAMNSGSRKDHVNSKNQGKKLKAMRTVKYAFEIIELRTGKNPIQVFLDAIENSIIREEVTRIMYGGVSYFHAVDTSPSRMVDLAIRHIAQGAAMKAFRSPRSLAEALA 177
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_METST (30S ribosomal protein S7P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rps7p PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.965e-29 Identity = 71/158 (44.94%), Postives = 103/158 (65.19%), Query Frame = 2 Query: 131 KLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLA 604 KLF++W +V V D+ L +Y+ + VPHT GR+ ++F K++ IVERL N +M RN+GKK A IV+ A+EII+ T QNP+QV+V AV N+ PRE+ TRI G+ + AVDI+P RRV+ ++ +T GA +SAF+N K+ + LA Sbjct: 4 KLFDKWDVTEVTVEDMGLQNYVCLDEI----VVPHTMGRHVKRQFAKSKVSIVERLMNKIMRTERNSGKKNKAYSIVEDALEIINNKTKQNPVQVLVKAVENTAPREETTRIKYGGIGYQIAVDIAPQRRVDLSLGFITKGAMQSAFKNKKSAAQCLA 157
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_METTH (30S ribosomal protein S7P OS=Methanobacterium thermoautotrophicum GN=rps7p PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 7.467e-29 Identity = 68/157 (43.31%), Postives = 104/157 (66.24%), Query Frame = 2 Query: 134 LFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLA 604 +F++W ++V+V D+ L+ YI + + VPHT GR+ ++F K++ IVERL N +M RN+GKK A +IV+ A EII+ T +NP+Q++V AV N+ PRE+ TRI G+ + AVDISP RRV+ ++ +T GA ++AF+N K+ LA Sbjct: 4 VFDKWELDEVKVEDMGLAKYICLDSI----LVPHTMGRHVKRQFAKSKVSIVERLINKVMRTERNSGKKNKAYKIVQEAFEIINRRTKENPVQILVKAVENTSPREETTRIKYGGIGYQVAVDISPQRRVDLSLGFITRGAMQAAFKNKKSIEECLA 156 The following BLAST results are available for this feature:
BLAST of DY270368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >DY270368 ID=DY270368; Name=DY270368; organism=Citrus clementina; type=EST; length=1259bpback to top |