DY270368
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_METB6 (30S ribosomal protein S7P OS=Methanoregula boonei (strain 6A8) GN=rps7p PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.225e-28 Identity = 66/173 (38.15%), Postives = 102/173 (58.96%), Query Frame = 2 Query: 86 VLAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLA 604 V AQ + + P LFN+W +V+V D SL Y+ + +PH+ G++S + F KA IVERL N LM N GKK +A+ IV+ A E+I+ T +NPI+V+V+A+ N+GPRE+ R+ G+ ++VD +PLRRV+ AI + +S+ ++ K +LA Sbjct: 6 VKAQPEGDAAPQSKALLFNKWDVSEVKVTDPSLVRYVNLTPQ----IIPHSCGKFSRQEFNKANMMIVERLINRLMQTENNTGKKQLAIGIVRDAFELINKKTKRNPIEVLVEAIGNTGPREETVRLKYGGINVPKSVDTAPLRRVDSAIGFIAEAVWKSSRKSKKPASAILA 174 HSP 2 Score: 29.261 bits (64), Expect = 1.225e-28 Identity = 14/30 (46.67%), Postives = 20/30 (66.67%), Query Frame = 3 Query: 600 LPDELINAAKGSSNSYAIQKKDEI*KSGKS 689 L DELI A+KG + Y++ KK+E + KS Sbjct: 173 LADELIAASKGDAKCYSVGKKEEKERIAKS 202
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_HALMA (30S ribosomal protein S7P OS=Haloarcula marismortui GN=rps7p PE=1 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 3.706e-28 Identity = 71/177 (40.11%), Postives = 99/177 (55.93%), Query Frame = 2 Query: 77 ATAVLAQSQDPSQPHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLAR 607 A A A+ +P KLF W D++ +D S YI V T + HT GR++ K+F+K++ IVERL N LM N GKK +A IV A E++H TD+NPIQV+V AV NS PRE+ R+ G+ +AVD++P RRV+QA+ L G +F+ LA+ Sbjct: 9 ADADAAEESEPETAR--AKLFGEWDITDIEYSDPSTERYITV------TPIAHTMGRHADKQFKKSEISIVERLINRLMQTDENTGKKQLATSIVTEAFELVHERTDENPIQVLVSAVENSAPREETVRLKYGGISVPKAVDVAPQRRVDQALKFLAEGVYGGSFKTTTTAAEALAQ 177
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_METBU (30S ribosomal protein S7P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps7p PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 1.408e-27 Identity = 60/158 (37.97%), Postives = 103/158 (65.19%), Query Frame = 2 Query: 131 KLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLA 604 KLF +W +V+V D + Y+ + VPHT+G+++ ++F K+ IVERL N++M + +N GKK +A+RIV A +I++ T +NP+QV+V+AV N+GPRE+ R+ G+ +AVD +P RRV+ A+ ++ G+ ++AF++ ++ LA Sbjct: 3 KLFGKWDLTEVEVADAGIKRYVNLDPV----IVPHTSGKHARQQFNKSDITIVERLVNNVMRNAQNTGKKQIALRIVDEAFDIVNSKTKKNPVQVLVEAVSNAGPREEVVRLKYGGISVPKAVDTAPQRRVDHALRNISIGSNQTAFKSKRSAAECLA 156
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_METVS (30S ribosomal protein S7P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps7p PE=3 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 1.839e-27 Identity = 67/160 (41.88%), Postives = 97/160 (60.62%), Query Frame = 2 Query: 125 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLA 604 ++KLF +W V V D SL +I + + +PHTAGR S K F K + +VERL N LM N GKK + I++ A+ I+ T +NPIQV+VDA+ NSGPRE+ TRI G+ Q+VD+SP RR++ A ++ GA + A ++ K+ + LA Sbjct: 8 EIKLFGKWDSTSVTVKDPSLKSHISL----NPVLIPHTAGRNSKKMFDKNKMHVVERLANKLMATQVNTGKKNEVLSIIEEALTIVENRTKENPIQVVVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAFRNISLGASQGAHKSKKSIAQCLA 163
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_ARCFU (30S ribosomal protein S7P OS=Archaeoglobus fulgidus GN=rps7p PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.839e-27 Identity = 67/160 (41.88%), Postives = 101/160 (63.12%), Query Frame = 2 Query: 125 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLA 604 ++ +F ++ +VQ++D +L YI ++ YVPH GR++ F K + IVERL N +M G N GKK++A IVK A EII T +NPIQV+VDA+IN+GPRE+ R+ G+ +AVD S RRV+ A+ + GAR +AF++ ++ + LA Sbjct: 9 ELLVFGKYDPSEVQISDPALESYICLEPK----YVPHNHGRHANVPFAKQKVFIVERLINKVMRKGHNTGKKILAYNIVKEAFEIIEKKTKKNPIQVLVDAIINAGPREEVVRLKYGGIAVPKAVDTSSSRRVDIALRNIAEGARRAAFKSKRSIAQCLA 164
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_METHJ (30S ribosomal protein S7P OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rps7p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 2.402e-27 Identity = 64/157 (40.76%), Postives = 95/157 (60.51%), Query Frame = 2 Query: 134 LFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLA 604 LFNRW +V + D ++ Y+ + ++ VPH+ GR + + F KA IVERL N LM N GKK +A+RIV+ A EI+H T +NPI+V+ DAV N+GPRE+ R+ G+ ++VD +P+RRVN A+ L+ G ++ + K LA Sbjct: 12 LFNRWDTSEVTIRDPGIARYVNL----NSMMVPHSCGRLTRQEFHKANMLIVERLINQLMRTEVNTGKKQLAIRIVRDAFEIVHQKTKKNPIEVLCDAVANAGPREETVRLKYGGINVPKSVDTAPMRRVNTAVGLIAAGVYSASHKKKKPVANALA 164
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_THEGJ (30S ribosomal protein S7P OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rps7p PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 3.137e-27 Identity = 72/176 (40.91%), Postives = 98/176 (55.68%), Query Frame = 2 Query: 125 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNN----------------GKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLA 604 ++K+F RW+ EDV VND SL YI ++ +PH+ GR++ K F KAQ IVERL N +M G ++ KK+ A +VK A II T QNPIQV++ A+ NS PRED T I G+ AVD+SPLRR++ A+ + GA +RN Y + LA Sbjct: 14 ELKVFGRWSVEDVTVNDPSLRPYIALEPR----ILPHSHGRHAKKPFGKAQVHIVERLINKVMRSGASHYKAGGHFMRREHRSIMSKKMKAYEVVKEAFMIIERRTKQNPIQVLIRAIENSAPREDTTTIAFGGIRYHMAVDVSPLRRLDVALKNIALGASIKCYRNKTTYAQALA 185
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_METLZ (30S ribosomal protein S7P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps7p PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 3.787e-27 Identity = 59/159 (37.11%), Postives = 94/159 (59.12%), Query Frame = 2 Query: 128 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLA 604 + LFN+W +V V D + Y+ + + T VP + GR + ++F K++ IVERL N LM N GKK+M ++V A ++I+ T QNP+QV+VDAV N+GPRE+ R+ G+ ++VD +P+RRVN A+ + + + + K +LA Sbjct: 10 ILLFNKWDMSEVVVKDAGMVRYVTITS----TEVPSSCGRLTQQQFTKSEMAIVERLINRLMQQEYNTGKKMMCTKMVMDAFDVINKKTKQNPLQVLVDAVANAGPREETVRLKYGGINVPKSVDSAPIRRVNTALRYIALATWKGSHKTKKPAYLVLA 164 HSP 2 Score: 31.187 bits (69), Expect = 3.787e-27 Identity = 14/30 (46.67%), Postives = 21/30 (70.00%), Query Frame = 3 Query: 600 LPDELINAAKGSSNSYAIQKKDEI*KSGKS 689 L DELI AAKG + +++ KK+E+ + KS Sbjct: 163 LADELIMAAKGDAKCFSVGKKEEVERIAKS 192
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_THEON (30S ribosomal protein S7P OS=Thermococcus onnurineus (strain NA1) GN=rps7p PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 4.097e-27 Identity = 72/176 (40.91%), Postives = 98/176 (55.68%), Query Frame = 2 Query: 125 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNN----------------GKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLA 604 ++K+ RW+ EDV VND SL YI ++ +PH+ GR++ K F KAQ IVERL N +M G ++ GKK+ A +VK A II T QNPIQV + A+ NS PRED T I G+ AVD+SPLRR++ A+ + GA +RN +Y + LA Sbjct: 14 ELKVMGRWSVEDVVVNDPSLRPYINLEPR----ILPHSHGRHAKKPFGKAQVHIVERLINKVMRSGASSHKVGGHFMRREHRSLMGKKMKAYEVVKEAFMIIERRTKQNPIQVFIRAIENSAPREDTTTIAFGGIRYHMAVDVSPLRRLDIALKNIALGASAKCYRNKTSYAQALA 185
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_THECE (30S ribosomal protein S7P OS=Thermococcus celer GN=rps7p PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 6.989e-27 Identity = 72/176 (40.91%), Postives = 97/176 (55.11%), Query Frame = 2 Query: 125 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNN----------------GKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLA 604 ++K+ RW+ EDV VND SL YI ++A +PH+ GR++ K F KA IVERL N +M G + KK+ A +VK A II T QNPIQV+V A+ NS PRED T I G+ AVD+SPLRR++ A+ + GA +RN +Y + LA Sbjct: 14 ELKVMGRWSVEDVTVNDPSLRPYINLEAR----LLPHSHGRHAKKAFGKANVHIVERLINKVMRSGATSHKAGGHFMRRDDRSLMSKKMKAYEVVKEAFMIIERRTKQNPIQVLVRAIENSAPREDTTTIAFGGIRYHMAVDVSPLRRLDIALKNIALGASAKCYRNKTSYAQALA 185 The following BLAST results are available for this feature:
BLAST of DY270368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >DY270368 ID=DY270368; Name=DY270368; organism=Citrus clementina; type=EST; length=1259bpback to top |