DY270368
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_METMA (30S ribosomal protein S7P OS=Methanosarcina mazei GN=rps7p PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 9.128e-27 Identity = 59/158 (37.34%), Postives = 100/158 (63.29%), Query Frame = 2 Query: 131 KLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLA 604 K+F +W +V+V D+ + Y+ + VPH++G+++ ++F K++ IVERL N+LM N GKK + +R V+ A +II+ T QNPIQ++VDA+ N+GPRE+ R+ G+ +AVD +P RRV+ A+ ++ G +AF++ ++ LA Sbjct: 6 KIFGKWDPTEVEVRDLGIKRYVSLAPV----IVPHSSGKHARQQFNKSEISIVERLANNLMRTETNTGKKQVTLRAVEEAFDIINRKTQQNPIQILVDAIANAGPREEVVRLKYGGISVPKAVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLA 159
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_HALMO (30S ribosomal protein S7P OS=Halococcus morrhuae GN=rps7p PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.086e-26 Identity = 65/167 (38.92%), Postives = 100/167 (59.88%), Query Frame = 2 Query: 92 AQSQDPSQPH-----YDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRN 577 +++ +P QP KLF RW ++ +D S YI V T V HT GR++ K+F+K++ IVERL N LM N GKK A RIV++A ++I T+++P+QV+V AV N+ PRE+ R+ G+ QAVD++P RRV+QA+ + G ++F++ Sbjct: 4 SEAPEPDQPAGAEEATGAKLFERWDVTGIEYDDPSTERYITV------TPVEHTMGRHAGKQFQKSEISIVERLINRLMQTDENTGKKQQATRIVRNAFDLIAERTEESPVQVLVSAVENAAPREETVRLKYGGISVPQAVDVAPQRRVDQALKFIAEGTHSASFKS 164 HSP 2 Score: 22.3274 bits (46), Expect = 1.086e-26 Identity = 9/25 (36.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 594 ECLPDELINAAKGSSNSYAIQKKDE 668 E L ++L AA +YA+ +K+E Sbjct: 170 EALAEQLTGAANYDVQTYAVNQKEE 194
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_METTP (30S ribosomal protein S7P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps7p PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.192e-26 Identity = 59/159 (37.11%), Postives = 103/159 (64.78%), Query Frame = 2 Query: 128 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLA 604 +K+F +W +V++ D+S+ YI ++ V HT GR++ ++F+K++ +VERL N +M +N G+K +A RIV+ A +IIH T +NP+ V+V A+ N+GPRE+ R+ G+ +AVD +P RRV+ A+ L+ GA +++F++ ++ LA Sbjct: 1 MKVFGKWDASEVEIPDLSVKGYINLKPR----IVLHTGGRHAKQQFKKSELHVVERLINKMMRKEKNTGQKQIAYRIVEEAFDIIHSRTKENPLSVLVRAISNAGPREEVVRLKYGGITVPKAVDTAPQRRVDTALMLIAKGAWQASFKSRRSIQNCLA 155
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_METAC (30S ribosomal protein S7P OS=Methanosarcina acetivorans GN=rps7p PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.192e-26 Identity = 59/158 (37.34%), Postives = 100/158 (63.29%), Query Frame = 2 Query: 131 KLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLA 604 K+F +W +V+V D+ + Y+ + VPH++G+++ ++F K++ IVERL N+LM N GKK + +R V+ A +I++ T QNPIQV+VDA+ N+GPRE+ R+ G+ +AVD +P RRV+ A+ ++ G +AF++ ++ LA Sbjct: 6 KIFGKWDPTEVEVKDLGIKRYVSLTPV----IVPHSSGKHARQQFNKSEISIVERLANNLMRTETNTGKKQVTLRAVEEAFDIVNKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPKAVDTAPQRRVDTALRYISMGTNAAAFKSKRSVAECLA 159
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_PYRKO (30S ribosomal protein S7P OS=Pyrococcus kodakaraensis GN=rps7p PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.033e-26 Identity = 72/176 (40.91%), Postives = 95/176 (53.98%), Query Frame = 2 Query: 125 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNN----------------GKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLA 604 +VK+ RW+ EDV V D SL YI + A +PH+ GRY+ K F KA IVERL N +M G ++ KK+ A +VK A II T QNPIQV+V A+ NS PRED T I G+ +VD+SPLRR++ A+ + GA +RN Y + LA Sbjct: 14 EVKVMGRWSVEDVTVEDPSLKPYINLDAR----ILPHSHGRYAKKPFGKANVHIVERLINKVMRSGASHYKAGGHFMRREHRSIMSKKMKAYEVVKEAFMIIERRTKQNPIQVLVKAIENSAPREDTTTIAFGGIRYHMSVDVSPLRRLDIALKNIALGASIKCYRNKTTYAQALA 185
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_CENSY (30S ribosomal protein S7P OS=Cenarchaeum symbiosum GN=rps7p PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 2.656e-26 Identity = 72/166 (43.37%), Postives = 97/166 (58.43%), Query Frame = 2 Query: 134 LFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMH---------GRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLA 604 LF +W D++V D L I ++ +P+T GR ++KRF KA IVERL N MMH GR GKK+ ++ VK A EII+L T +NP++V+V AV NS P ED TRI G V +VD+SPLRRV+ A+ + G +E+AFR K+ LA Sbjct: 9 LFRKWDLSDIEVVDPGLKTAISLRKMT----LPYTYGRSALKRFNKADANIVERLANK-MMHFGKKYAKNTGRMAGKKMGSINTVKTAFEIINLKTGRNPVEVLVRAVENSAPNEDTTRIVYGGTVYHVSVDVSPLRRVDLALRFIADGVKEAAFRKPKSLEEFLA 169
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_METBF (30S ribosomal protein S7P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps7p PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 3.469e-26 Identity = 59/159 (37.11%), Postives = 99/159 (62.26%), Query Frame = 2 Query: 128 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLA 604 +K+F +W +V+V D+ + Y+ + VPH++G+++ ++F K++ IVERL N+LM N GKK +R V+ A +I+ T QNPIQV+VDA+ N+GPRE+ R+ G+ +AVD +P RRV+ A+ ++ G +AF++ ++ LA Sbjct: 1 MKIFGKWDPTEVEVRDLGIKRYVSLTPV----IVPHSSGKHARQQFNKSEISIVERLANNLMRTEINTGKKQKTLRAVEEAFDIVSKKTKQNPIQVLVDAIANAGPREEVVRLKYGGISVPKAVDTAPQRRVDTALRYISMGTNNAAFKSKRSVAECLA 155
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_PICTO (30S ribosomal protein S7P OS=Picrophilus torridus GN=rps7p PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 8.975e-26 Identity = 53/151 (35.10%), Postives = 89/151 (58.94%), Query Frame = 2 Query: 125 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRN 577 D + ++ +Q++D+ L+ YI + ++ + HT GRYS K +ERL N LM + GKK A R++K A EI+ T QNP+QV+++A+ NS PRE+ TR+ G+ ++VD+SP RR+++A+ + GA +F++ Sbjct: 2 DRLIMGKYDVSGIQIHDMGLAKYINL----NSYFNLHTGGRYSNYSAGKRNVNTIERLLNKLMRTEKWTGKKYSAYRVLKEAFEIVEQKTKQNPVQVLINAIENSAPREEVTRLKYGGIAVPKSVDVSPSRRLDEALRNICIGATSKSFKS 148 HSP 2 Score: 36.1946 bits (82), Expect = 8.975e-26 Identity = 16/34 (47.06%), Postives = 23/34 (67.65%), Query Frame = 3 Query: 570 FVTSRTIAECLPDELINAAKGSSNSYAIQKKDEI 671 F + I ECL +E+I A++ NSYA+ KK+EI Sbjct: 146 FKSKVPIEECLANEIILASRNDGNSYAVSKKEEI 179
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_PYRFU (30S ribosomal protein S7P OS=Pyrococcus furiosus GN=rps7p PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.009e-25 Identity = 70/179 (39.11%), Postives = 99/179 (55.31%), Query Frame = 2 Query: 116 PHYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRN----------------NGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKNYCRMLA 604 PH ++K+ RW+ EDV+V D SL YI ++ +PHT GR++ K F KA IVERL N +M G + N KK+ A +VK A +II T +NPIQV+V A+ N+ PRED T + G+ AVDISP+RR++ A+ + GA +RN ++ LA Sbjct: 12 PH-EIKVMGRWSTEDVEVRDPSLKPYINLEPR----LLPHTHGRHAKKHFGKANVHIVERLINKIMRSGGSHYKVAGHFMRREHRSLNSKKVKAYEVVKEAFKIIEQRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHVAVDISPMRRLDVALRNIALGASAKCYRNKMSFAEALA 185
BLAST of DY270368 vs. ExPASy Swiss-Prot
Match: RS7_NANEQ (30S ribosomal protein S7P OS=Nanoarchaeum equitans GN=rps7p PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.166e-25 Identity = 63/154 (40.91%), Postives = 83/154 (53.90%), Query Frame = 2 Query: 128 VKLFNRWTFEDVQVNDISLSDYIGVQAAKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGR-----------NNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGA 556 +KLF RW +EDV V D L DYI ++ +P++ GR+ RF KA+ PI+ERL LM G GKK A +I+ EII T QNP++V V A+ N+ PRE+ T I G +AVD SP RRV+ AI + GA Sbjct: 3 MKLFGRWDYEDVTVEDPGLRDYINLKPM----LIPYSGGRHQKHRFGKAKIPIIERLAGRLMTSGHLGKKHKWTSEHQTGKKYNAYKIIIRTFEIIEKRTKQNPLKVFVKAIENAAPREETTTIEYGGARYPKAVDCSPQRRVDLAIRHMVWGA 152 HSP 2 Score: 33.113 bits (74), Expect = 1.166e-25 Identity = 17/35 (48.57%), Postives = 24/35 (68.57%), Query Frame = 3 Query: 585 TIAECLPDELINAAKGSSNSYAIQKKDEI*KSGKS 689 +I E L +E+INA S SYAI++K EI K+ +S Sbjct: 162 SIEEALAEEIINAYNNSLKSYAIKRKLEIEKTAES 196 The following BLAST results are available for this feature:
BLAST of DY270368 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >DY270368 ID=DY270368; Name=DY270368; organism=Citrus clementina; type=EST; length=1259bpback to top |