DY270379

Overview
NameDY270379
Unique NameDY270379
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length983
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: DHX16_HUMAN (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Homo sapiens GN=DHX16 PE=1 SV=2)

HSP 1 Score: 323.553 bits (828), Expect = 1.125e-87
Identity = 164/312 (52.56%), Postives = 221/312 (70.83%), Query Frame = 2
Query:   35 RSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG-KIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILSFLTGSEEIDFGCESLCEKIKALGKDVPEMGVLTV*RALPNEISTKNILNRPPRGGEKGLWPPKLVRPL*TFNGKFLLLNPGFAQQ 967
            + K SIQ  RRSLP+F  + EL+ A+ ++QVLI+ GETGSGKTTQ+ QYL E GYT KG KI CTQPRRVAA SVA RVA E G +LG EVGY+IRFEDCT   T+++YMTDGMLLRE L + +L+ YSV+M+DEAHERT++TD+LFGL+K + + RP+L+++V SAT+D  RFS +F +  +F IPGR FPVDI Y++    DYL++ +++VLQIHV +P GDIL FLTG EEI+  CE L ++ + LG  + E+ VL +   LP+++  + I    P G  K +    +     T  G   +L+PGF +Q
Sbjct:  387 QQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQAR-IFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQ 697          
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: PRP16_HUMAN (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo sapiens GN=DHX38 PE=1 SV=2)

HSP 1 Score: 314.694 bits (805), Expect = 5.227e-85
Identity = 162/308 (52.60%), Postives = 219/308 (71.10%), Query Frame = 2
Query:   41 KLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILSFLTGSEEIDFGCESLCEKIKALGKDVPEMGVLTV*RALPNEISTKNILNRPPRGGEKGLWPPKLVRPL*TFNGKFLLLNPGFAQ 964
            K SI EQR+ LPIF ++ EL+  + DN ++I++GETGSGKTTQL QYL E GYT  G IGCTQPRRVAA SVAKRV+EE G  LGEEVGYAIRFEDCT  +TLIKYMTDG+LLRE L + +L  YS I++DEAHER++NTDVLFGLL+++V RR DL+LIVTSAT+DAE+F+ +F N  IF IPGRTFPVDI +S+    DY+++A+   LQ+H+    GDIL F+ G E+I+   + + E ++ L ++ P + VL +   LP+++  K I  + P G  K +    +     T +G   +++ G+ +
Sbjct:  522 KKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAK-IFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCK 827          
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: PRP16_BOVIN (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos taurus GN=DHX38 PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 6.826e-85
Identity = 162/308 (52.60%), Postives = 218/308 (70.78%), Query Frame = 2
Query:   41 KLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILSFLTGSEEIDFGCESLCEKIKALGKDVPEMGVLTV*RALPNEISTKNILNRPPRGGEKGLWPPKLVRPL*TFNGKFLLLNPGFAQ 964
            K SI EQR+ LPIF ++ EL+  + DN ++I++GETGSGKTTQL QYL E GYT  G IGCTQPRRVAA SVAKRV+EE G  LGEEVGYAIRFEDCT   TLIKYMTDG+LLRE L + +L  YS I++DEAHER++NTDVLFGLL+++V RR DL+LIVTSAT+DAE+F+ +F N  IF IPGRTFPVDI +S+    DY+++A+   LQ+H+    GDIL F+ G E+I+   + + E ++ L ++ P + VL +   LP+++  K I  + P G  K +    +     T +G   +++ G+ +
Sbjct:  522 KKSILEQRQYLPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAMSVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFPVDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEEL-ENAPALAVLPIYSQLPSDLQAK-IFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCK 827          
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: PRP16_SCHPO (Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 OS=Schizosaccharomyces pombe GN=prp16 PE=2 SV=2)

HSP 1 Score: 311.997 bits (798), Expect = 3.388e-84
Identity = 155/309 (50.16%), Postives = 221/309 (71.52%), Query Frame = 2
Query:   47 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILSFLTGSEEIDFGCESLCEKIKALGKDVPEMGVLTV*RALPNEISTKNILNRPPRGGEKGLWPPKLVRPL*TFNGKFLLLNPGFAQQNM 973
            S +EQR  LP F ++ +L+  + DNQVLI++GETGSGKTTQLAQ+L E GY   G IGCTQPRRVAA SVAKRV+EE G RLG  VGY+IRFED TGPDT+IKYMTDG+LLRE L+  NL +YSVI++DEAHER++NTD+L GLLK+++ RR D++L+VTSAT+++++FS +F     F+IPGRT+PVDI +++   +DY+++A+  VLQIH+ +P GDIL F+TG E+I+  CE + +++  L  D P + +L +   +P ++  K I +    G  K +    +     T +G   +++ G+ +  M
Sbjct:  484 SYREQREFLPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQPRRVAAMSVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRRRDIKLLVTSATMNSQKFSDFFGGAPQFTIPGRTYPVDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADRLNQL-HDAPRLSILPIYSQMPADLQAK-IFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKLKM 790          
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: CDC28_SCHPO (Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein cdc28 OS=Schizosaccharomyces pombe GN=cdc28 PE=2 SV=2)

HSP 1 Score: 311.997 bits (798), Expect = 3.388e-84
Identity = 156/311 (50.16%), Postives = 226/311 (72.67%), Query Frame = 2
Query:   47 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKG--KIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILSFLTGSEEIDFGCESLCEKIKALGKDVPEMGVLTV*RALPNEISTKNILNRPPRGGEKGLWPPKLVRPL*TFNGKFLLLNPGFAQQNM 973
            S++  R+SLP+++ K++L++A+++ QVL+++ ETGSGKTTQL Q+L EAGYT KG  KI CTQPRRVAA SVA RVA+E   RLG+EVGY+IRFE+ T   T+IKY+TDGMLLRE L + +L+ YSVI++DEAHERT++TD+LFGL+K + + RPDL+++++SAT+DAE+FS YF    +F +PGR +PVDI Y+ Q   +Y+ +A+ T+LQIH  +P GDIL FLTG +EI+   E++ E  + LGK +PE+ +  +   LP+E+  K I +  P G  K +    +     T +G   +++ GF +QNM
Sbjct:  410 SLESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYT-KGNKKICCTQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLVKDIARFRPDLKVLISSATIDAEKFSAYFDEAPVFYVPGRRYPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQAK-IFDPTPPGARKVVLATNIAETSITIDGVNFVIDSGFVKQNM 718          
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: MOG1_CAEEL (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 OS=Caenorhabditis elegans GN=mog-1 PE=2 SV=2)

HSP 1 Score: 311.227 bits (796), Expect = 5.779e-84
Identity = 156/310 (50.32%), Postives = 221/310 (71.29%), Query Frame = 2
Query:   47 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYF-FNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILSFLTGSEEIDFGCESLCEKIKALGKDVPEMGVLTV*RALPNEISTKNILNRPPRGGEKGLWPPKLVRPL*TFNGKFLLLNPGFAQQNM 973
            SI++QR  LP+F  + +++  + +N V+I++GETGSGKTTQLAQYL E G+   G IGCTQPRRVAA SVA+RVA+E G  LG++VGYAIRFEDCT   T+IKYMTDG+LLRE L D +L QYS I++DEAHER++NTDVLFGLL++++ +R DL+LIVTSAT+DA++F+ +F  NC  F+IPGRTFPV++ ++R  V DY+D+A+   + IH+   +GDIL F+ G E+I+  CE + EK+  L  + P + VL +   LP+++  K I  R P G  K +    +     T +G   +++PGF +  +
Sbjct:  433 SIKQQREYLPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCTQPRRVAAMSVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRADLKLIVTSATMDADKFADFFGGNCPTFTIPGRTFPVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKEKLGEL-DEAPPLAVLPIYSQLPSDLQAK-IFQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKV 740          
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: DHX15_SCHPO (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43 OS=Schizosaccharomyces pombe GN=prp43 PE=2 SV=1)

HSP 1 Score: 292.738 bits (748), Expect = 2.127e-78
Identity = 158/321 (49.22%), Postives = 214/321 (66.67%), Query Frame = 2
Query:   50 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLA--EAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILSFLTGSEEIDFGCESLCEKIKALGKDVPEMG------VLTV*RALPNEISTKNILNRPPRG-----GEKGLWPPKLVRPL*TFNGKFLLLNPGFAQQNM 973
            I E RR LP+++ + E ++  H+NQ+++ +GETGSGKTTQ+ Q++   E  + T  +I CTQPRRVAA SVAKRVA+E    LGEEVGY IRFEDC+GP+TL+KYMTDGMLLRE + D  LS+YS I+LDEAHERT+ TD+L GL+K+L  RRPDL++IV SATLDA++F  YFF+  + ++PGRT+PV+I Y+++   DYL++AL TVLQIHV+E  GDIL FLTG EEI    E  C KI     D+   G      V  +  +LP     + I    P       G K +    +     T +G   +++PGF++Q +
Sbjct:   68 ILETRRELPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLATRRPDLKIIVMSATLDAKKFQKYFFDAPLLAVPGRTYPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFLTGEEEI----EDACRKITLEADDLVREGAAGPLKVYPLYGSLPPN-QQQRIFEPTPEDTKSGYGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKI 383          
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: PRP2_YEAST (Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2 OS=Saccharomyces cerevisiae GN=PRP2 PE=1 SV=1)

HSP 1 Score: 291.197 bits (744), Expect = 6.188e-78
Identity = 158/313 (50.48%), Postives = 214/313 (68.37%), Query Frame = 2
Query:   44 LSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK--IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPD-TLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEP-EGDILSFLTGSEEIDFGCESLCEKIKALGKDVPEMGVLTV*RALPNEISTKNILNRPPRGGEKGLWPPKLVRPL*TFNGKFLLLNPGFAQQN 970
            L+IQE R+ LP+ + K+EL+Q +  NQVLI++GETGSGKTTQL QYL E G+T +GK  I  TQPRRVAATSVA RVA+E    LG+EVGY IRFED T P+ T++KYMTDGMLLRE L D  LS+YS IM+DEAHERT+ TD+L GLLK ++ +RP L+L+++SAT++A++FS +F NC IF++PGR +PVDI+Y+ Q   +Y+ +A+ T+ QIH  +   GDIL FLTG EEI+     L E +  LG    +M +  +   LP E   K I    P    K +    +     T +G   +++PGF ++N
Sbjct:  214 LTIQEARKLLPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAITQPRRVAATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQRPTLKLLISSATMNAKKFSEFFDNCPIFNVPGRRYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLK-IFQPTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKEN 525          
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: DHX15_ARATH (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.991e-76
Identity = 150/320 (46.88%), Postives = 214/320 (66.88%), Query Frame = 2
Query:   50 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEA---GYTTKGK---IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILSFLTGSEEIDFGCESLCEKIKALGKDVPEMGVLTV*RALPNEISTKNI------LNRPPRGGEKGLWPPKLVRPL*TFNGKFLLLNPGFAQQNM 973
            I E+RR LP++  K++ +  ++ NQ LIL+GETGSGKTTQ+ Q++ +A     + KG+   +GCTQPRRVAA SV++RVA+E    +GEEVGY+IRFEDCT   T++KY+TDGMLLRE + D  L +Y VI+LDEAHERT+ TDVLFGLLK++++ RPDL+L+V SATL+AE+F  YF    +  +PGR  PV+I Y+++   DYL++A+ TV+QIH+ EP GDIL FLTG EEI+  C  + +++  LG  V  + V+ +   LP  +  K        L      G K +    +     T +G   +++PGFA+Q +
Sbjct:   58 ILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKV 377          
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: DHX15_DICDI (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15 OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 1.092e-74
Identity = 153/320 (47.81%), Postives = 213/320 (66.56%), Query Frame = 2
Query:   11 PKAFTFGQRSKLSIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK-IGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILSFLTGSEEIDFGCESLCEKIKALGKDVPEMGVLTV*RALPNEISTKNILNRPPRGGEKGLWPPKLVRPL*TFNGKFLLLNPGFAQQ 967
            PK  TF +R    I E+R+ LP++K K + I+ + +NQV+IL+GETGSGKTTQ+ Q++ +AG    GK +G TQPRRVAA SVAKRV+EE    LGEEVGY+IRFE+ +   T +KY+TDGMLLRE + D  L++Y VI+LDEAHERT++TD+LFGL+K ++KRR DL+LIV SATL+A +F  YF N  +  +PGR  PV+I Y+ +   DYL+SA+ TV+ IH +E  GDIL FLTG EEI+  C  +  + +  G  +P M  L +  +LP    +K       R   K +    +     T +G   +++PGF++Q
Sbjct:   58 PKKETFSKRY-YEILEKRKELPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRKDLKLIVMSATLEAGKFQKYFENAPLIKVPGRLHPVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILVFLTGEEEIEDTCAKIQRETRERG--LPPMKTLPLYSSLPIYQQSKIFDTCKER---KCIVSTNIAETSLTIDGIVFVVDPGFSKQ 371          
The following BLAST results are available for this feature:
BLAST of DY270379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
DHX16_HUMAN1.125e-8752.56Putative pre-mRNA-splicing factor ATP-dependent RN... [more]
PRP16_HUMAN5.227e-8552.60Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
PRP16_BOVIN6.826e-8552.60Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
PRP16_SCHPO3.388e-8450.16Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
CDC28_SCHPO3.388e-8450.16Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
MOG1_CAEEL5.779e-8450.32Probable pre-mRNA-splicing factor ATP-dependent RN... [more]
DHX15_SCHPO2.127e-7849.22Probable pre-mRNA-splicing factor ATP-dependent RN... [more]
PRP2_YEAST6.188e-7850.48Pre-mRNA-splicing factor ATP-dependent RNA helicas... [more]
DHX15_ARATH1.991e-7646.88Probable pre-mRNA-splicing factor ATP-dependent RN... [more]
DHX15_DICDI1.092e-7447.81Putative pre-mRNA-splicing factor ATP-dependent RN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YG24FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270379 ID=DY270379; Name=DY270379; organism=Citrus clementina; type=EST; length=983bp
GAATGCATACCCTAAAGCATTCACTTTTGGACAAAGGTCAAAGCTCTCCA
TCCAGGAACAGAGGCGGAGCTTGCCAATTTTCAAATTGAAGAATGAACTA
ATCCAGGCTGTTCATGATAACCAGGTCCTAATACTCATTGGTGAGACTGG
TTCAGGTAAGACAACCCAATTGGCACAGTATCTTGCAGAGGCTGGTTACA
CTACGAAGGGCAAGATTGGATGTACCCAGCCCCGTAGGGTGGCTGCAACT
TCTGTGGCCAAGAGGGTTGCTGAAGAGTTTGGCTGTCGTTTGGGAGAGGA
GGTTGGTTATGCCATTCGATTTGAGGATTGTACTGGACCAGATACTCTGA
TCAAGTACATGACTGATGGGATGTTGCTTAGGGAGATTTTGATTGATGAG
AATCTTTCTCAGTATTCTGTCATTATGCTTGATGAAGCTCATGAGAGGAC
AATCAACACTGATGTTCTTTTTGGGTTACTTAAGCAGCTTGTGAAACGGA
GACCTGACCTACGCCTGATTGTGACATCTGCCACATTGGATGCAGAGAGA
TTTTCTGGATATTTCTTCAACTGCAACATCTTCAGTATTCCAGGGAGAAC
ATTTCCAGTTGATATAAACTACTCCAGACAGGAGGTAACTGATTATCTAG
ATTCAGCATTGATCACAGTCTTGCAGATCCACGTTGATGAACCTGAAGGT
GATATTCTTTCTTTCTTGACAGGGTCAGAGGAGATAGATTTTGGCTGTGA
ATCCCTTTGCGAGAAAATAAAAGCGCTGGGTAAAGATGTTCCTGAAATGG
GTGTTTTAACCGTTTAACGTGCGCTTCCAAATGAAATTTCAACCAAAAAT
ATTTTAAACCGCCCCCCCCGGGGGGGAGAAAAGGGTTTGTGGCCACCAAA
ATTGGTGAGGCCCCTTTGAACATTTAATGGAAAATTTTTGTTATTGAATC
CCGGGTTTGCACAACAAAATATGCCATAATTCA
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