DY270379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: DHX9_PONAB (ATP-dependent RNA helicase A OS=Pongo abelii GN=DHX9 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 4.199e-34 Identity = 78/193 (40.41%), Postives = 121/193 (62.69%), Query Frame = 2 Query: 47 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGC----TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTG-PDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPV 610 +I ++R LP+ K ++E+++A+ N V+I+ G TG GKTTQ+ Q++ + C TQPRR++A SVA+RVA E G G+ GY++RFE P I + T G+LLR++ + + S +++DE HER INTD L +L+ +V+ P++R+++ SAT+D F YFFNC I + GRT+PV Sbjct: 380 AILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPV 570
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: DHX9_MOUSE (ATP-dependent RNA helicase A OS=Mus musculus GN=Dhx9 PE=1 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 4.199e-34 Identity = 79/193 (40.93%), Postives = 119/193 (61.66%), Query Frame = 2 Query: 47 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGC----TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTG-PDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPV 610 S+ ++R LP+ K + E+++A+ N V+I+ G TG GKTTQ+ QY+ + C TQPRR++A +VA+RVA E G G+ GY++RFE P I + T G+LLR++ + + S +++DE HER INTD L +L+ +V P++R+++ SAT+D F YFFNC I + GRTFPV Sbjct: 382 SVLQERELLPVKKFEAEILEAISSNSVVIIRGATGCGKTTQVPQYILDDFIQNDRAAECNIVVTQPRRISAVAVAERVAYERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVLAYPEVRIVLMSATIDTTMFCEYFFNCPIIEVYGRTFPV 572
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: DHX9_HUMAN (ATP-dependent RNA helicase A OS=Homo sapiens GN=DHX9 PE=1 SV=4) HSP 1 Score: 145.591 bits (366), Expect = 4.199e-34 Identity = 78/193 (40.41%), Postives = 121/193 (62.69%), Query Frame = 2 Query: 47 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGKIGC----TQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTG-PDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPV 610 +I ++R LP+ K ++E+++A+ N V+I+ G TG GKTTQ+ Q++ + C TQPRR++A SVA+RVA E G G+ GY++RFE P I + T G+LLR++ + + S +++DE HER INTD L +L+ +V+ P++R+++ SAT+D F YFFNC I + GRT+PV Sbjct: 380 AILQERELLPVKKFESEILEAISQNSVVIIRGATGCGKTTQVPQFILDDFIQNDRAAECNIVVTQPRRISAVSVAERVAFERGEEPGKSCGYSVRFESILPRPHASIMFCTVGVLLRKL--EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAYPEVRIVLMSATIDTSMFCEYFFNCPIIEVYGRTYPV 570
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: DQX1_BOVIN (ATP-dependent RNA helicase DQX1 OS=Bos taurus GN=DQX1 PE=2 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 5.485e-34 Identity = 94/259 (36.29%), Postives = 144/259 (55.60%), Query Frame = 2 Query: 56 EQRRSLPIFKLKNELIQAVHDNQ--VLILIGETGSGKTTQLAQYLAE---AGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLK--QLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEV-TDYLDSALITVLQIHVDEPEGDILSFLTGSEEIDFGCESLCEKIKALGKDVPEMGVL 808 EQRRSLP++ + ++ + + V+++ GE G GK+TQ+ Q+ AE A KG + TQP +AA S+A RVA+E LG EVGY+I EDCTGPDTL+++ D +LL+E+ V++LDEA ER++ +D+L GLL+ +L DLR++V + + ++ +P +T R + D +D+A VL+ +E GD+L +L EEI CESL K+++L P VL Sbjct: 40 EQRRSLPVWAARFIFLEHLESSPSGVVLVSGEPGCGKSTQIPQWCAEFVLARGFQKGWVTVTQPYPLAALSLALRVADEMDLTLGHEVGYSIPQEDCTGPDTLLRFCWDRLLLQEVASTRGTGARGVLILDEAQERSVASDLLQGLLRDARLGSLPGDLRVVVVTDPSLEPKLQDFWGGPPTVCVPRKTGSCPTPVYRDSLPADRVDAACQAVLEWCQEEAPGDVLVYLPSEEEISLCCESLSRKVRSLENQGPPPRVL 298
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: YL419_YEAST (Putative ATP-dependent RNA helicase YLR419W OS=Saccharomyces cerevisiae GN=YLR419W PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 7.163e-34 Identity = 85/254 (33.46%), Postives = 142/254 (55.91%), Query Frame = 2 Query: 47 SIQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLA-----EAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDE--------------PEGDILSFLTGSEEIDFGCE 751 S+Q R LP +K + +I ++ N+V+++ GETGSGK+TQ+ Q++ E G K KI CTQPRR++A +A+RV++E GEEVGY IR + T T IK+MT G+L+R + + + +++++DE HER+I+TD++ L+K L+ R +++++ SAT++ + F +F I GRTFP+ +Y +++ LD + + D+ P D F +G D C+ Sbjct: 596 SMQLVREQLPAWKKQKVIIDIINKNEVVLITGETGSGKSTQVVQFILDFLQKEKGDFGKTKIVCTQPRRISAIGLAERVSDERCVTCGEEVGYVIRGVNKTKASTRIKFMTTGVLVRLLQNARTMLENTIVVIDEVHERSIDTDLIVTLMKNLLHRVRGMKIVLMSATVNVDLFKKFFPGLATCHIEGRTFPI-TDYFLEDILSDLDFKIKREKALSYDDDSVDERNNDDQYLKPRADSKFFTSGQINYDLLCQ 848
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: DQX1_HUMAN (ATP-dependent RNA helicase DQX1 OS=Homo sapiens GN=DQX1 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 9.355e-34 Identity = 93/252 (36.90%), Postives = 145/252 (57.54%), Query Frame = 2 Query: 56 EQRRSLPIFKLKNELIQAVHDNQ--VLILIGETGSGKTTQLAQYLAEAGYTT---KGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLK--QLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIP----GRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILSFLTGSEEIDFGCESLCEKIKAL 778 +QR++LPI+ + ++ + N V+++ GE GSGK+TQ+ Q+ AE KG++ TQP +AA S+A RVA+E LG EVGY+I EDCTGP+TL+++ D +LL+E+ + V++LDEA ER++ +D L GLL+ +L K DLR++V + + ++ N I IP R P+ Y D +++A VL++ E GD+L FL EEI CESL ++++L Sbjct: 40 KQRQALPIWAARFTFLEQLESNPTGVVLVSGEPGSGKSTQIPQWCAEFALARGFQKGQVTVTQPYPLAARSLALRVADEMDLTLGHEVGYSIPQEDCTGPNTLLRFCWDRLLLQEVASTRGTGAWGVLVLDEAQERSVASDSLQGLLQDARLEKLPGDLRVVVVTDPALEPKLRAFWGNPPIVHIPREPGERPSPI---YWDTIPPDRVEAACQAVLELCRKELPGDVLVFLPSEEEISLCCESLSREVESL 288
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: DQX1_MOUSE (ATP-dependent RNA helicase DQX1 OS=Mus musculus GN=Dqx1 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.351e-32 Identity = 91/261 (34.87%), Postives = 147/261 (56.32%), Query Frame = 2 Query: 56 EQRRSLPIFKLKNELIQAVHDNQ--VLILIGETGSGKTTQLAQYLAE----AGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRR--PDLRLIVTSATLDAERFSGYFFNCNIFSIPGRT-FPVDINYSRQEVTDYLDSALITVLQI-HVDEPEGDILSFLTGSEEIDFGCESLCEKIKALGKDVPEMGVL 808 EQRR+LPI+ + ++ + + V+++ G+ GSGK+TQ+ Q+ AE G+ T G++ TQP +AA S+A RVA+E LG E+GY+I EDCTGP+T++++ D + L+E+ +SV++LDEA ER++ +D+L GLL+ R D R++V + +F ++ N I +P + Y TD +++A VL++ +E GD+L +L EEI CESL ++ L P VL Sbjct: 37 EQRRALPIWAARFLFLEHLESSPTGVVLVSGDPGSGKSTQIPQWCAEFALARGFQT-GQVTVTQPYPLAAMSLASRVADEMDLTLGHEIGYSIPQEDCTGPNTMLRFCWDRLFLQEVASTRGPGAWSVLILDEAQERSVASDLLQGLLRDTRLRNLPGDPRVVVVTDPALEPKFQAFWGNSPIVRVPREPGGDPTLAYKDTVPTDLVEAACQAVLELCQQEEAPGDVLVYLPSEEEISLCCESLSGEMGTLAVPGPPPRVL 296
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: YG65_SCHPO (Uncharacterized helicase C15C4.05 OS=Schizosaccharomyces pombe GN=SPBC15C4.05 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 1.144e-31 Identity = 75/191 (39.27%), Postives = 120/191 (62.83%), Query Frame = 2 Query: 62 RRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLAEAGYTTKGK---IGCTQPRRVAATSVAKRVAEEFG-----CRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPV 610 R LP + +I AV+++Q+LI+ G+TG GK+TQ+ +L E T GK I T+PRR++A S+A RV++E G R E VGY++R + P T + Y+T G LR + + + + +++DE HER+I++D+L + L+K+ P L++I+ SATL+AE+F YF N+ +IPG+T+PV Sbjct: 628 RNQLPATMFRETIIDAVNNSQLLIISGDTGCGKSTQIPAFLLENS-TKNGKAVKIYVTEPRRISAISLANRVSQELGGNPPSARSHELVGYSVRLDSKCTPLTPLTYVTTGTFLRLLEVGNEIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQHPHLKIIIMSATLNAEKFQLYFEGSNLITIPGKTYPV 817
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: YUM14_USTMA (Putative DEAH-box ATP-dependent helicase UM11114 OS=Ustilago maydis GN=UM11114 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 9.681e-31 Identity = 81/206 (39.32%), Postives = 121/206 (58.74%), Query Frame = 2 Query: 50 IQEQRRSLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLAQYLA----EAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRL---------GEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILI--DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINY 622 + E RRSLP E++ + N+V+I+ GETG GKTTQ+ Q++ EAG ++ I TQPRRV+A VA RVA E G +L G VGYAIR E + + + T G+LLR + D +L S +++DE HER +++D L L++L++R +++++ SAT++ E F+ YF SIPGRTF V+ +Y Sbjct: 729 MDETRRSLPAASAAREILGLIRSNRVVIIAGETGCGKTTQVPQFILDEAIEAGRGSECNIVVTQPRRVSAIGVASRVAVERGEKLDGKKKAVAPGSLVGYAIRGERRASRECRLLFTTTGVLLRRLGAGGDTDLKGISHVVVDEVHERNVDSDFLLLELRELLRRNSRIKVVLMSATINQETFASYFGKAPCISIPGRTFAVEDHY 934
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: HRPB_ECOLI (ATP-dependent RNA helicase hrpB OS=Escherichia coli (strain K12) GN=hrpB PE=1 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 1.398e-29 Identity = 90/254 (35.43%), Postives = 136/254 (53.54%), Query Frame = 2 Query: 68 SLPIFKLKNELIQAVHDNQVLILIGETGSGKTTQLA-QYLAEAGYTTKGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTINTDVLFGLLKQLVK-RRPDLRLIVTSATLDAERFSGYFFNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHVDEPEGDILSFLTGSEEIDFGCESLCEKIKALGKDV---PEMGVLTV 814 SLP+ + EL+ A+ ++L TG+GK+T L Q LA G GKI +PRR+AA +VA+R+AE + G+ VGY +R ++C GP+T ++ +T+G+L R I D LS +++LDE HER++ D+ LL + + R DL+L++ SATLD +R + GR+FPV+ Y D A+ + + G +L FL G EI E L +I G DV P G L++ Sbjct: 3 SLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAHPGIN--GKIILLEPRRLAARNVAQRLAELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEGVLTRMIQRDPELSGVGLVILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLDNDRLQQMLPEAPVVISEGRSFPVERRYLPLPAHQRFDDAVAVATAEMLRQESGSLLLFLPGVGEIQRVQEQLASRI---GSDVLLCPLYGALSL 251 The following BLAST results are available for this feature:
BLAST of DY270379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >DY270379 ID=DY270379; Name=DY270379; organism=Citrus clementina; type=EST; length=983bpback to top |