DY270379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: H962L_ASFP4 (Putative RNA Helicase B962L OS=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=Pret-084 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 4.219e-18 Identity = 77/239 (32.22%), Postives = 124/239 (51.88%), Query Frame = 2 Query: 119 NQVLILIGETGSGKTTQLAQYLA-----EAGYTTKGKIG----CTQPRRVAATSVAKRVAEEF---GCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILI---DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPD------LRL---IVTSATLDAERFSGYF--FNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHV----DEP-EGDILSFLTGSEEIDF 742 ++VLI+ TGSGK+T L ++ E ++ + +G CTQPR + A ++AK + LG+ VGY + P+ + Y T G+LL ++ DE S+Y+ +++DEAHER + D++ +K +++R LR+ I+TSAT+D ++S YF NI + GR + V+ ++ +Y+ +A T L IH D P E DIL F+ G EI F Sbjct: 49 DRVLIIKSRTGSGKSTALPVHVFRILRNENTHSFQKYLGRSVICTQPRVLTAVTLAKDIGASTHYPDMILGQTVGYQTK-PLTEKPNRGLIYATAGVLLAQLHTMTDDEIASRYAFMIIDEAHERALGIDLMLMYIKSMLERMLQRGSIGALRIPFVILTSATIDTHKYSTYFGIGKENIILVEGRQYGVETHWPLYNTNNYIKTACETALTIHKENIHDRPTEADILIFMPGMAEIRF 286
BLAST of DY270379 vs. ExPASy Swiss-Prot
Match: H962L_ASFB7 (Putative RNA helicase B962L OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=Ba71V-072 PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 5.510e-18 Identity = 77/239 (32.22%), Postives = 124/239 (51.88%), Query Frame = 2 Query: 119 NQVLILIGETGSGKTTQLAQYLA-----EAGYTTKGKIG----CTQPRRVAATSVAKRVAEEF---GCRLGEEVGYAIRFEDCTGPDTLIKYMTDGMLLREILI---DENLSQYSVIMLDEAHERTINTDVLFGLLKQLVKRRPD------LRL---IVTSATLDAERFSGYF--FNCNIFSIPGRTFPVDINYSRQEVTDYLDSALITVLQIHV----DEP-EGDILSFLTGSEEIDF 742 ++VLI+ TGSGK+T L ++ E ++ + +G CTQPR + A ++AK + LG+ VGY + P+ + Y T G+LL ++ DE S+Y+ +++DEAHER + D++ +K +++R LR+ I+TSAT+D ++S YF NI + GR + V+ ++ +Y+ +A T L IH D P E DIL F+ G EI F Sbjct: 49 DRVLIIKSRTGSGKSTALPVHVFRILRNENTHSFQKYLGRSVICTQPRVLTAVTLAKDIGASTHYPDMILGQTVGYHTK-PLTEKPNRGLIYATAGVLLAQLHTMTDDEIASRYAFMIIDEAHERALGIDLMLMYIKSMLQRMLQRGSIGALRIPFVILTSATIDTHKYSTYFGIGKENIILVEGRQYGVETHWPLYNTNNYIKTACETALTIHKENIHDRPTEADILIFMPGMAEIRF 286 The following BLAST results are available for this feature:
BLAST of DY270379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >DY270379 ID=DY270379; Name=DY270379; organism=Citrus clementina; type=EST; length=983bpback to top |