DY270384
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY270384 vs. ExPASy Swiss-Prot
Match: TCPQ_MACFA (T-complex protein 1 subunit theta OS=Macaca fascicularis GN=CCT8 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.348e-12 Identity = 57/163 (34.97%), Postives = 84/163 (51.53%), Query Frame = 1 Query: 10 ILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDAN--DRATVLGLVKSCIGTKFTSQFGD--LLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKD 486 ILREL+V HPAAK ++ S Q++EVGDGT V+V AG +L +AEE + + + Y A A +L + N D V L+++ I +K Q+G+ LA L A ++ D G VD I+V K+ G + S VL G++F K+ Sbjct: 72 ILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVIEGYEIACRKAHEILPNLVCCSAKNLRDVDEVSSLLRTSIMSK---QYGNEVFLAKLIAQACVSIFPDSGH--FNVD---NIRVCKILGSGISSSSVLHGMVFKKE 226
BLAST of DY270384 vs. ExPASy Swiss-Prot
Match: TCPQ_HUMAN (T-complex protein 1 subunit theta OS=Homo sapiens GN=CCT8 PE=1 SV=4) HSP 1 Score: 74.7146 bits (182), Expect = 1.348e-12 Identity = 57/163 (34.97%), Postives = 84/163 (51.53%), Query Frame = 1 Query: 10 ILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDAN--DRATVLGLVKSCIGTKFTSQFGD--LLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKD 486 ILREL+V HPAAK ++ S Q++EVGDGT V+V AG +L +AEE + + + Y A A +L + N D V L+++ I +K Q+G+ LA L A ++ D G VD I+V K+ G + S VL G++F K+ Sbjct: 72 ILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVIEGYEIACRKAHEILPNLVCCSAKNLRDIDEVSSLLRTSIMSK---QYGNEVFLAKLIAQACVSIFPDSGH--FNVD---NIRVCKILGSGISSSSVLHGMVFKKE 226
BLAST of DY270384 vs. ExPASy Swiss-Prot
Match: TCPQ_MOUSE (T-complex protein 1 subunit theta OS=Mus musculus GN=Cct8 PE=1 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 3.922e-12 Identity = 57/163 (34.97%), Postives = 84/163 (51.53%), Query Frame = 1 Query: 10 ILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDAN--DRATVLGLVKSCIGTKFTSQFGD--LLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKD 486 ILREL+V HPAAK ++ S Q++EVGDGT V+V AG +L +AEE + + + Y A + A +L + N D V L+++ I +K Q+G LA L A ++ D G VD I+V K+ G + S VL G++F K+ Sbjct: 72 ILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVISGYEIACKKAHEILPELVCCSAKNLRDVDEVSSLLRTSIMSK---QYGSETFLAKLIAQACVSIFPDSGN--FNVD---NIRVCKILGSGIYSSSVLHGMVFKKE 226
BLAST of DY270384 vs. ExPASy Swiss-Prot
Match: TCPQ_BOVIN (T-complex protein 1 subunit theta OS=Bos taurus GN=CCT8 PE=2 SV=3) HSP 1 Score: 73.1738 bits (178), Expect = 3.922e-12 Identity = 56/163 (34.36%), Postives = 84/163 (51.53%), Query Frame = 1 Query: 10 ILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDAN--DRATVLGLVKSCIGTKFTSQFGD--LLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKD 486 ILREL+V HPAAK ++ S Q++EVGDGT V+V AG +L +AEE + + + Y A + A +L + N D V L+ + + +K Q+G+ LA L A ++ D G VD I+V K+ G + S VL G++F K+ Sbjct: 72 ILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSK---QYGNEVFLAKLIAQACVSIFPDSGH--FNVD---NIRVCKILGSGVHSSSVLHGMVFKKE 226
BLAST of DY270384 vs. ExPASy Swiss-Prot
Match: TCPQ_CAEEL (T-complex protein 1 subunit theta OS=Caenorhabditis elegans GN=Y55F3AR.3 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 5.664e-11 Identity = 53/190 (27.89%), Postives = 95/190 (50.00%), Query Frame = 1 Query: 10 ILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAM--PIDANDRATVLGLVKSCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGE 573 IL+EL++ HPAA+ +I + Q++++GD T +V++LA +L A I+ P + Y +A E A+ +L T+ + D + V ++S I +K D++ADL A T VD I++ K+ G + S V+ G++F + A G++ R+ + RI + P + + E Sbjct: 71 ILKELEIQHPAARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAAGYEQAAEKALEILPTLVVKEATDMKNIEEVRQYIRSAITSKQYDN-EDIIADLVAKACVTT-CPANSFNFNVD---NIRICKIIGSGVHTSTVMNGMVFKRG--AEGEI-REARDARIAVYTCPFDLTQTE 252 The following BLAST results are available for this feature:
BLAST of DY270384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >DY270384 ID=DY270384; Name=DY270384; organism=Citrus clementina; type=EST; length=1306bpback to top |