DY270384
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY270384 vs. ExPASy Swiss-Prot
Match: TCPA_MONDO (T-complex protein 1 subunit alpha OS=Monodelphis domestica GN=TCP1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 6.037e-21 Identity = 65/190 (34.21%), Postives = 102/190 (53.68%), Query Frame = 1 Query: 1 GNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVL-DTIAMPIDANDRATVLGLVKSCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKK 567 G IL+ L+V HPAAK + EL+ QD+EVGDGTTSV+++A E+L A+E + + HPT I Y A ++AV + + + + D + ++ K+ + +K GD A++ +DA V +G + I V K G ++S ++ G N VVA M ++IVN +I LD L+ K Sbjct: 58 GATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSIIGGYRLACKEAVRYINENLIINTDELGKDCLINAAKTSMSSKIIGIDGDFFANMVVDAVLAVKYTDVKGQPRYPVNS-INVLKAHGRSQKESMLINGYALN-CVVASQGMPKRIVNAKIACLDFSLQKTK 245
BLAST of DY270384 vs. ExPASy Swiss-Prot
Match: TCPB_CAEEL (T-complex protein 1 subunit beta OS=Caenorhabditis elegans GN=cct-2 PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 7.885e-21 Identity = 64/190 (33.68%), Postives = 106/190 (55.79%), Query Frame = 1 Query: 1 GNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDANDRATVLGLVKSCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMR-RKIVNPRIILLDSPLEYKK 567 G IL+ + V +PAAK ++++S TQD EVGDGTTSV VLA E+L AE+ +N+ HP I Y +AL A L ++ N R +L + ++ +G+K SQ + A LA+DA + +G +D I++ K GG + +S + +G + K PG + R++ +I++ ++P++ K Sbjct: 64 GATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAVLRL-----KGSGNLDA---IQIIKKLGGSMNESYLDEGFLLEK---LPGMFQPRRVEKAKILIANTPMDTDK 242
BLAST of DY270384 vs. ExPASy Swiss-Prot
Match: TCPZ_SCHPO (T-complex protein 1 subunit zeta OS=Schizosaccharomyces pombe GN=cct6 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.030e-20 Identity = 61/230 (26.52%), Postives = 124/230 (53.91%), Query Frame = 1 Query: 1 GNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPIDANDRATVLGLVKSCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENSTNAELG*EEERGVMFENRKRISIQNPCMQIGKIKPDL 690 G +L E+ + +P A + + + QD+ GDGTTSV +L GE+L AE +I + HP++I +N A +A+ LD+ + DR +L + K+ + TK +S+ + LA +DA T+ + +D+ +++ K+ D+++++G++ + P M +++ N I++L+ LEY+K E ++ E+R + E+ ++ + N +I ++K ++ Sbjct: 58 GKVLLTEMQIQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFLDSFKTDFEV-DREVLLNVAKTSLSTKISSKVVESLAPAVVDAILTI----RRPDEPIDL-HMVEIMKMQNRSASDTQLIRGLLLDHGARHP-DMPKQVKNAYILILNVSLEYEKSEINSGFFYSTSEQRERLVESERKF-VDNKLRKIVELKKEV 279
BLAST of DY270384 vs. ExPASy Swiss-Prot
Match: TCPH_DICDI (T-complex protein 1 subunit eta OS=Dictyostelium discoideum GN=cct7 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.030e-20 Identity = 60/201 (29.85%), Postives = 112/201 (55.72%), Query Frame = 1 Query: 1 GNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPI-DANDRATVLGLVKSCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPG--KMRRKIVNPRIILLDSPLEYKKGENSTNAEL 594 G +++ LD+ HPAA+++++++++QD EVGDGTTSV++LAGE L A+ F+ + HP +I RA+ A E A + +++ I N R + + + +K + + + +DA + ++ ++D+ I ++K GG L DS+ + G F + G + + I NP+++ L+ LE K ++ NAE+ Sbjct: 65 GATVMKLLDIVHPAARTLVDIAKSQDSEVGDGTTSVVILAGEFLKAAKPFLEEGIHPQIIIRAFRSACELAKQKIQELSVDIKPENMREFLEKCASTSMNSKLIASHKQFFSKMVVDAVQLLDDNI-----DLDM---IGIKKESGGGLGDSQFIAGAAFKRTFFYAGFEQQPKHIKNPKVLCLNIELELKAEKD--NAEI 255
BLAST of DY270384 vs. ExPASy Swiss-Prot
Match: TCPE1_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.030e-20 Identity = 64/200 (32.00%), Postives = 112/200 (56.00%), Query Frame = 1 Query: 1 GNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVLDTIAMPID--ANDRATVLGLVKSCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKKGENSTNAEL 594 G IL +DV + AK ++ELSR+QD ++GDGTT V+V+AG +L AE+ + + HP + Y A AV L++I+ + A D ++ + + +K S+ LA++++ A V DL + +D+ IKVE GG+LED+ +++G++ +KD+ P +M ++I + I +L P E K + ++ Sbjct: 70 GATILELMDVDNQIAKLLVELSRSQDYDIGDGTTGVVVMAGALLEQAEKLLERGIHPIRVAEGYEMASRIAVDHLESISTKYEFSATDIEPLVQTCMTTLSSKIVSRCKRALAEISVKAVLAV-ADLERKDVNLDL---IKVEGKVGGKLEDTELVEGIIVDKDMSHP-QMPKRIYDAHIAILTCPFEPPKPKTKHKVDI 264
BLAST of DY270384 vs. ExPASy Swiss-Prot
Match: TCPA_DICDI (T-complex protein 1 subunit alpha OS=Dictyostelium discoideum GN=tcp1 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.030e-20 Identity = 61/193 (31.61%), Postives = 107/193 (55.44%), Query Frame = 1 Query: 1 GNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVL-DTIAMPIDANDRATVLGLVKSCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIK---KYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKK 567 G IL+++D+ HPAAK +++LS QD+EVGDGTT+V++LA E+L A E + + HPTVI + A +A+ + +T+A+ ++ + ++ + K+ + +K + D + + I+A T V +G D+K I + K G ++S +++G N V + G M ++I +I LD L K Sbjct: 59 GATILQKIDIEHPAAKILVQLSELQDQEVGDGTTTVVILAAELLKRANELVARKVHPTVIISGFRLACTEAIKYINETLAVKVETLPKDFIVNIAKTSMSSKTINDDSDFFSKIVIEAITRVKTIDYKG----DVKYPINAINILKAHGKSAKESTLVEGYALNCTVASEG-MPKRIQGAKIAFLDFNLAKTK 246
BLAST of DY270384 vs. ExPASy Swiss-Prot
Match: TCPA_BOVIN (T-complex protein 1 subunit alpha OS=Bos taurus GN=TCP1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.757e-20 Identity = 64/190 (33.68%), Postives = 101/190 (53.16%), Query Frame = 1 Query: 1 GNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVA-VLDTIAMPIDANDRATVLGLVKSCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKK 567 G IL+ L+V HPAAK + EL+ QD+EVGDGTTSV+++A E+L A+E + + HPT + Y A ++AV + + + + D R ++ K+ + +K GD A+L +DA + +G + I V K G +S ++ G N V + G M ++IVN +I LD L+ K Sbjct: 58 GATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVNS-INVLKAHGRSQMESMLINGYALNCVVGSQG-MPKRIVNAKIACLDFSLQKTK 245
BLAST of DY270384 vs. ExPASy Swiss-Prot
Match: TCPA2_MOUSE (T-complex protein 1 subunit alpha B OS=Mus musculus GN=Tcp1 PE=1 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 1.757e-20 Identity = 62/190 (32.63%), Postives = 101/190 (53.16%), Query Frame = 1 Query: 1 GNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVL-DTIAMPIDANDRATVLGLVKSCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKK 567 G IL+ L+V HPAAK + EL+ QD+EVGDGTTSV+++A E+L A+E + + HPT + Y A ++AV + + + + D R ++ K+ + +K GD A++ +DA V +G + + + K G +S ++ G N V + G M ++IVN +I LD L+ K Sbjct: 58 GATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIINTDELGRDCLINAAKTSMSSKIIGINGDYFANMVVDAVLAVKYTDARGQPRYPVNS-VNILKAHGRSQIESMLINGYALNCVVGSQG-MPKRIVNAKIACLDFSLQKTK 245
BLAST of DY270384 vs. ExPASy Swiss-Prot
Match: TCPA_SCHMA (T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.996e-20 Identity = 62/190 (32.63%), Postives = 103/190 (54.21%), Query Frame = 1 Query: 1 GNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVA-VLDTIAMPIDANDRATVLGLVKSCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKK 567 G IL+ LDV HPAAK +++L++ QDEEVGDGTTSV++LA +L A+E I++ HPT + Y A +A + + +A ++ +A ++ + ++ + +K + D+ + +A+DA V V G IK + + K G + +S ++ G N A +M R I +I LD L+ K Sbjct: 55 GATILKLLDVEHPAAKILVQLAQLQDEEVGDGTTSVVILAAALLKNADELISRFVHPTTVINGYRLACREACKYIQEHMAYDVNKLGKAGLINVARTAMSSKLINLDADMFSQMAVDALMAVEVSGGPKGPVYPIKA-VNILKAHGRSMSESMLIDGYALN-CTAASQQMPRIIKKAKIAFLDFSLQKVK 242
BLAST of DY270384 vs. ExPASy Swiss-Prot
Match: TCPA_RAT (T-complex protein 1 subunit alpha OS=Rattus norvegicus GN=Tcp1 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.996e-20 Identity = 62/190 (32.63%), Postives = 101/190 (53.16%), Query Frame = 1 Query: 1 GNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEEFINKNYHPTVICRAYNKALEDAVAVL-DTIAMPIDANDRATVLGLVKSCIGTKFTSQFGDLLADLAIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIILLDSPLEYKK 567 G IL+ L+V HPAAK + EL+ QD+EVGDGTTSV+++A E+L A+E + + HPT + Y A ++AV + + + + D R ++ K+ + +K GD A++ +DA V +G + + + K G +S ++ G N V + G ++R IVN +I LD L+ K Sbjct: 58 GATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIINTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAVKYTDIRGQPRYPVNS-VNILKAHGRSQIESMLINGYALNCVVGSQGMLKR-IVNAKIACLDFSLQKTK 245 The following BLAST results are available for this feature:
BLAST of DY270384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >DY270384 ID=DY270384; Name=DY270384; organism=Citrus clementina; type=EST; length=1306bpback to top |