DY270395

Overview
NameDY270395
Unique NameDY270395
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1224
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270395 vs. ExPASy Swiss-Prot
Match: PPIB_BOVIN (Peptidyl-prolyl cis-trans isomerase B OS=Bos taurus GN=PPIB PE=1 SV=4)

HSP 1 Score: 144.821 bits (364), Expect = 9.740e-34
Identity = 74/119 (62.18%), Postives = 85/119 (71.43%), Query Frame = 2
Query:   41 YKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA---EGRQNGTPKSKVVVADSGE 388
            YK S FHR+I  FM+Q            +SIYGE+FPDENFKLKH GPG +SMANAG DTNGSQFFITTV T+WLDG+HVVFGKVL GMDVV KVE+   +GR    P   V +AD G+
Sbjct:   88 YKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVESTKTDGRDK--PLKDVTIADCGK 204          
BLAST of DY270395 vs. ExPASy Swiss-Prot
Match: PPIB_RAT (Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus GN=Ppib PE=2 SV=3)

HSP 1 Score: 144.436 bits (363), Expect = 1.272e-33
Identity = 72/117 (61.54%), Postives = 82/117 (70.09%), Query Frame = 2
Query:   41 YKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSGE 388
            YK S FHR+I  FM+Q            +SIYGE+FPDENFKLKH GPG +SMANAG DTNGSQFFITTV TSWLDG+HVVFGKVL GMDVV KVE  +      P   V++ D G+
Sbjct:   88 YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVENTKTDSRDKPLKDVIIVDCGK 204          
BLAST of DY270395 vs. ExPASy Swiss-Prot
Match: PPIB_HUMAN (Peptidyl-prolyl cis-trans isomerase B OS=Homo sapiens GN=PPIB PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 2.170e-33
Identity = 71/117 (60.68%), Postives = 84/117 (71.79%), Query Frame = 2
Query:   41 YKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA-EGRQNGTPKSKVVVADSGE 388
            YK S FHR+I  FM+Q            +SIYGE+FPDENFKLKH GPG +SMANAG DTNGSQFFITTV T+WLDG+HVVFGKVL GM+VV KVE+ +      P   V++AD G+
Sbjct:   88 YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGK 204          
BLAST of DY270395 vs. ExPASy Swiss-Prot
Match: PPIB_SCHMA (Peptidyl-prolyl cis-trans isomerase B OS=Schistosoma mansoni GN=CYP PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 3.701e-33
Identity = 69/116 (59.48%), Postives = 84/116 (72.41%), Query Frame = 2
Query:   41 YKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQN-GTPKSKVVVADSG 385
            YKGSTFHR+I SFM+Q             SIYG++FPDENFKL+H G G LSMANAGPDTNGSQFFITTV TSWLDG+HVVFGKV+ GM++V ++E+E   +   P   + +A  G
Sbjct:   81 YKGSTFHRVIKSFMIQGGDFTNHDGTGGFSIYGDRFPDENFKLRHVGAGWLSMANAGPDTNGSQFFITTVKTSWLDGKHVVFGKVVEGMNIVRQIESETTDSRDRPVKSIKIASCG 196          
BLAST of DY270395 vs. ExPASy Swiss-Prot
Match: PPIB_CHICK (Peptidyl-prolyl cis-trans isomerase B OS=Gallus gallus GN=PPIB PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 3.701e-33
Identity = 71/116 (61.21%), Postives = 82/116 (70.69%), Query Frame = 2
Query:   41 YKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVVADSG 385
            +KGS FHR+I  FM+Q            +SIYG++FPDENFKLKH GPG +SMANAG DTNGSQFFITTV T+WLDG+HVVFGKVL GMDVV KVE  +      P   V +AD G
Sbjct:   79 FKGSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGDRFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVENTKTDSRDKPLKDVTIADCG 194          
BLAST of DY270395 vs. ExPASy Swiss-Prot
Match: CYP6_RHIOR (Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizopus oryzae GN=cyp6 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 3.701e-33
Identity = 69/126 (54.76%), Postives = 81/126 (64.29%), Query Frame = 2
Query:   11 GSGFPLLPIHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 388
            G G    P+HYK S FHRIIP FM Q            ESIYG  F DENF LKH G GLLSMANAGP+TNGSQFFIT V T WLDG H VFG+++ G  V+  +E  G ++G P +K+ + D GE
Sbjct:   48 GKGISGKPLHYKNSYFHRIIPGFMAQGGDFTMGDGRGGESIYGRTFKDENFTLKHKGKGLLSMANAGPNTNGSQFFITFVDTPWLDGNHTVFGQIVDGSKVLDLLEQHGSRSGMPSAKIEITDCGE 173          
BLAST of DY270395 vs. ExPASy Swiss-Prot
Match: PPIE_RHIOR (Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus oryzae GN=cyp10 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 4.834e-33
Identity = 70/116 (60.34%), Postives = 83/116 (71.55%), Query Frame = 2
Query:   41 YKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 388
            YK S+FHRIIP FM Q            +SIYG KF DENF LKHTGPG LSMANAG +TNGSQFFI T  T+WLDG+HVVFG+V+SGM+VV ++E  G  +G P  +VV+ D GE
Sbjct:  199 YKKSSFHRIIPQFMCQGGDFTKGNGTGGKSIYGGKFEDENFVLKHTGPGTLSMANAGSNTNGSQFFICTEKTTWLDGKHVVFGQVVSGMNVVREMERCGSASGKPSKRVVIVDCGE 314          
BLAST of DY270395 vs. ExPASy Swiss-Prot
Match: PPIA_CANAL (Peptidyl-prolyl cis-trans isomerase OS=Candida albicans GN=CYP1 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 4.834e-33
Identity = 67/116 (57.76%), Postives = 82/116 (70.69%), Query Frame = 2
Query:   41 YKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 388
            YKGS FHR+IP FMLQ            +SIYG KF DENF  +H  PGLLSMANAGP+TNGSQFFITTV   WLDG+HVVFG+V  G+D+V K+E+ G  +G    K+V+ +SG+
Sbjct:   46 YKGSIFHRVIPQFMLQGGDFTNFNGTGGKSIYGTKFADENFVKRHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVTDGLDIVKKIESFGSGSGATSKKIVIEESGQ 161          
BLAST of DY270395 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 4.834e-33
Identity = 67/119 (56.30%), Postives = 81/119 (68.07%), Query Frame = 2
Query:   32 PIHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 388
            P+H+KGS FHR+IP FM Q            ESIYG KF DENF  KHTG G+LSMAN+GP+TNGSQFFI T  TSWLDG+HVVFG+V+ G+DVV  +E  G  +G     V + D G+
Sbjct:   52 PLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQ 170          
BLAST of DY270395 vs. ExPASy Swiss-Prot
Match: PPID_NEUCR (41 kDa peptidyl-prolyl cis-trans isomerase OS=Neurospora crassa GN=cyp-41 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 6.313e-33
Identity = 71/119 (59.66%), Postives = 81/119 (68.07%), Query Frame = 2
Query:   32 PIHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVVADSGE 388
            P+HYKGSTFHR+I  FM+Q            ESIYG KF DENF+LKH  P LLSMANAGP TNGSQFF+TTV T  LDG+HVVFG+VLSG  VV ++E    Q   P    V+AD GE
Sbjct:   60 PLHYKGSTFHRVIKQFMIQGGDFTAGNGTGGESIYGAKFEDENFQLKHDRPFLLSMANAGPGTNGSQFFVTTVPTPHLDGKHVVFGEVLSGKSVVRQIENLKTQGDKPTKDAVIADCGE 178          
The following BLAST results are available for this feature:
BLAST of DY270395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 210
Match NameE-valueIdentityDescription
PPIB_BOVIN9.740e-3462.18Peptidyl-prolyl cis-trans isomerase B OS=Bos tauru... [more]
PPIB_RAT1.272e-3361.54Peptidyl-prolyl cis-trans isomerase B OS=Rattus no... [more]
PPIB_HUMAN2.170e-3360.68Peptidyl-prolyl cis-trans isomerase B OS=Homo sapi... [more]
PPIB_SCHMA3.701e-3359.48Peptidyl-prolyl cis-trans isomerase B OS=Schistoso... [more]
PPIB_CHICK3.701e-3361.21Peptidyl-prolyl cis-trans isomerase B OS=Gallus ga... [more]
CYP6_RHIOR3.701e-3354.76Peptidyl-prolyl cis-trans isomerase cyp6 OS=Rhizop... [more]
PPIE_RHIOR4.834e-3360.34Peptidyl-prolyl cis-trans isomerase E OS=Rhizopus ... [more]
PPIA_CANAL4.834e-3357.76Peptidyl-prolyl cis-trans isomerase OS=Candida alb... [more]
CP18D_ARATH4.834e-3356.30Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
PPID_NEUCR6.313e-3359.6641 kDa peptidyl-prolyl cis-trans isomerase OS=Neur... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YH20FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270395 ID=DY270395; Name=DY270395; organism=Citrus clementina; type=EST; length=1224bp
ACAACCTTCTGGGAGTGGCTTCCCGCTCTTGCCAATCCACTACAAGGGAA
GTACGTTCCATAGGATTATTCCCAGCTTTATGCTTCAAGGAGGTGATTTC
ACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATGGAGAGAAGTTCCC
TGACGAAAATTTCAAACTGAAGCACACTGGCCCAGGGCTTTTGTCAATGG
CAAATGCTGGTCCAGACACCAATGGTTCACAATTCTTCATTACAACTGTG
ACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTTGGAAAGGTGCTATC
GGGGATGGATGTAGTTTACAAGGTTGAAGCTGAAGGGAGGCAGAATGGCA
CTCCGAAGAGCAAAGTCGTCGTTGCAGACAGCGGTGAACTTCCTCTGTGA
TTTCCCCCATAATTATATAATTACGCTATACACCTTTTTAGTCCTCTCGT
CTTTTCAACCTTCATGAAGATACTCACAATTTGCCTATTTTATCATGTAA
TAAACATTTTCAATATGTCCTAGGTTGTTTGCCAAACTGGTGCCTCATTT
TCAAGGGGCATCCTTTCTCTGACCATCATAAAATAATAAAATGTACCCTA
TTTTCTTGGTCTATGTGGGCGCAGAAAAAAAGGCCCGGCCCATGGATTTT
GTAGAAACTCAAAGGCTATCCACAGACAAAAAAAAAACGTTTATCTAGAT
TTTGATATAATATCTCATGACTAAACGTATGCCGGTCGCTCCTGCTGCCT
CCTTTTTTTTCTTGATTCTCTATTCCTTTTTTTTTGCCACACCATCCTAC
TACTATACACTCCTATCCTCCTGTTACATATCACTACCACTAACTGACTC
ACTTTCCAAGCTCAAACATACACCAACTCCTATATTAATATCACATATAA
TATCCTAATCAGTAAACAAAAATTTTGACTCAAAGTTCACGGTATACATC
CACATATCGAAATATAAGAAATAAAAAGTTGTAGTTCTCCTACCCCACTC
CTGGTGCACCACTAGTTCTTTTTGTCGGACCTGCCTTCTATAACCCAGCC
TTGGCAGATGTGGGGTTCTTAGCCTTTGGTACCTGACGCCGTAGGGCTGT
CAGATACACTATACTCGCCTCCCATCATTTGATAGATTTGGAATTACATA
CGAACTGCAAGGTGTACTTTCATCTCCCATCCCCCCCCCCTGTCTACTAA
CACCATCCTCGCACCGCAATGTCA
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