DY270411
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 216.468 bits (550), Expect = 2.515e-55 Identity = 110/152 (72.37%), Postives = 128/152 (84.21%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 557 MGRG+VQLKRIENKINRQVTFSKRR+GLLKKAHEISVLCDAEVA IVFS KGKL+EY+TDS M++ILERYERY YAE+ L + E E GNW EY KLKA++E +Q+ KH MGEDL L+LKELQ +EQQ++S LK I SRK+ LML+SIS Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLESIS 152
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 1.132e-47 Identity = 96/152 (63.16%), Postives = 121/152 (79.61%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 557 MGRG VQL+RIENKINRQVTFSKRR+GLLKKAHEISVLCDA+VALIVFSTKGKL+E+S+ S ME ILERY+RY + ER + E NW EY LK++++ LQ++Q+ +GE L L++KELQ +E Q++ LK IRS+KNQL+ +SIS Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESIS 152
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 191.045 bits (484), Expect = 1.132e-47 Identity = 96/152 (63.16%), Postives = 121/152 (79.61%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 557 MGRG VQL+RIENKINRQVTFSKRR+GLLKKAHEISVLCDA+VALIVFSTKGKL+E+S+ S ME ILERY+RY + ER + E NW EY LK++++ LQ++Q+ +GE L L++KELQ +E Q++ LK IRS+KNQL+ +SIS Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLEYSLKHIRSKKNQLLFESIS 152
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: CMB1_DIACA (MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 8.392e-43 Identity = 88/152 (57.89%), Postives = 116/152 (76.32%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 557 MGRGRV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEVALIVFS +GKL+E+ + SCM + LERY+R Y + E ++ EY KLKA+++VLQR+ ++ +GEDL +LS KEL+ +E Q+D L+ IRS K Q ML ++ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCSTSCMNKTLERYQRCSYGSLETSQPSKETESSYQ-EYLKLKAKVDVLQRSHRNLLGEDLGELSTKELEQLEHQLDKSLRQIRSIKTQHMLDQLA 151
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: MADS6_ORYSJ (MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica GN=MADS6 PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 1.870e-42 Identity = 88/151 (58.28%), Postives = 115/151 (76.16%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 554 MGRGRV+LKRIENKINRQVTFSKRR+GLLKKA+E+SVLCDAEVALI+FS++GKL+E+ + + + + LERY+ CY Q N + +W E SKLKA+ E LQR Q+H +GEDL LS+KELQ +E+Q++ L R RK QLM++ + Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGS-AGITKTLERYQHCCY-NAQDSNNALSETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECALSQARQRKTQLMMEQV 149
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSJ (MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica GN=MADS1 PE=1 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 9.279e-42 Identity = 89/151 (58.94%), Postives = 114/151 (75.50%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 554 MGRG+V+LKRIENKI+RQVTF+KRR+GLLKKA+E+S+LCDAEVALI+FS +G+LFE+S+ SCM + LERY Y + A E E N EY KLK R+E LQ Q++ +GEDL LS+KEL+ +E QI+ LK IRSRKNQ +L + Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERYRSCNYNSQDAAAPENEINYQ---EYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQL 148
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSI (MADS-box transcription factor 1 OS=Oryza sativa subsp. indica GN=MADS1 PE=2 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 9.279e-42 Identity = 89/151 (58.94%), Postives = 114/151 (75.50%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 554 MGRG+V+LKRIENKI+RQVTF+KRR+GLLKKA+E+S+LCDAEVALI+FS +G+LFE+S+ SCM + LERY Y + A E E N EY KLK R+E LQ Q++ +GEDL LS+KEL+ +E QI+ LK IRSRKNQ +L + Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERYRSCNYNSQDAAAPENEINYQ---EYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQIRSRKNQALLDQL 148
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: MADS8_ORYSJ (MADS-box transcription factor 8 OS=Oryza sativa subsp. japonica GN=MADS8 PE=1 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.583e-41 Identity = 88/154 (57.14%), Postives = 117/154 (75.97%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYA--ERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 557 MGRGRV+LKRIENKINRQVTF+KRR+GLLKKA+E+SVLCDAEVALI+FS +GKL+E+ + M R LERY+++ Y + +Q E E + EY KLKAR+E LQR Q++ +GEDL L +KEL+ +E+Q+DS L+ IRS + Q ML ++ Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSGQSMTRTLERYQKFSYGGPDTAIQNKENELVQSSRNEYLKLKARVENLQRTQRNLLGEDLGTLGIKELEQLEKQLDSSLRHIRSTRTQHMLDQLT 154
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 4.605e-41 Identity = 89/152 (58.55%), Postives = 114/152 (75.00%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQAN-EIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 554 MGRG+V+LKRIENKI+RQVTF+KRR+GLLKKA+E+SVLCDAEVALI+FST+G+LFE+ST SCM + LERY Y +A+ +E + EY KLK R+E LQ Q++ +GEDL LSLKEL+ +E QI+ L IRS KNQ +L + Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQV 152
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSI (MADS-box transcription factor 5 OS=Oryza sativa subsp. indica GN=MADS5 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 4.605e-41 Identity = 89/152 (58.55%), Postives = 114/152 (75.00%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQAN-EIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 554 MGRG+V+LKRIENKI+RQVTF+KRR+GLLKKA+E+SVLCDAEVALI+FST+G+LFE+ST SCM + LERY Y +A+ +E + EY KLK R+E LQ Q++ +GEDL LSLKEL+ +E QI+ L IRS KNQ +L + Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQV 152 The following BLAST results are available for this feature:
BLAST of DY270411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >DY270411 ID=DY270411; Name=DY270411; organism=Citrus clementina; type=EST; length=1186bpback to top |